RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 CAPS2Q9BXY5 557 aa11.93□□□□□ -0.5
VAPB-204ENST00000475243 LSG1Q9H089 658 aaKnown RBP11.93□□□□□ -0.5
VAPB-204ENST00000475243 SLC38A10Q9HBR0 1119 aa11.93□□□□□ -0.5
VAPB-204ENST00000475243 SOS2Q07890 1332 aaPredicted RBP11.93□□□□□ -0.5
VAPB-204ENST00000475243 SPDYE2BA6NHP3 402 aa11.93□□□□□ -0.5
VAPB-204ENST00000475243 SPDYE6P0CI01 402 aa11.93□□□□□ -0.5
VAPB-204ENST00000475243 PSMC2P35998 433 aaKnown RBP11.93□□□□□ -0.5
VAPB-204ENST00000475243 BRD3Q15059 726 aa11.93□□□□□ -0.5
VAPB-204ENST00000475243 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.93□□□□□ -0.5
VAPB-204ENST00000475243 IPO11Q9UI26 975 aaKnown RBP11.93□□□□□ -0.5
VAPB-204ENST00000475243 LMNB1P20700 586 aa11.93□□□□□ -0.5
VAPB-204ENST00000475243 EEF1GP26641 437 aaKnown RBP11.93□□□□□ -0.5
VAPB-204ENST00000475243 RCN2Q14257 317 aa11.93□□□□□ -0.5
VAPB-204ENST00000475243 UBE2SQ16763 222 aa11.93□□□□□ -0.5
VAPB-204ENST00000475243 MTERF2Q49AM1 385 aa11.93□□□□□ -0.5
VAPB-204ENST00000475243 ASPRV1Q53RT3 343 aa11.93□□□□□ -0.5
VAPB-204ENST00000475243 MIS18BP1Q6P0N0 1132 aa11.93□□□□□ -0.5
VAPB-204ENST00000475243 ZNF710Q8N1W2 664 aa11.93□□□□□ -0.5
VAPB-204ENST00000475243 SLC35F6Q8N357 371 aa11.93□□□□□ -0.5
VAPB-204ENST00000475243 LRRC8CQ8TDW0 803 aa11.93□□□□□ -0.5
VAPB-204ENST00000475243 SLC7A3Q8WY07 619 aa11.93□□□□□ -0.5
VAPB-204ENST00000475243 DYNLL2Q96FJ2 89 aa11.93□□□□□ -0.5
VAPB-204ENST00000475243 KRT3P12035 628 aa11.93□□□□□ -0.5
VAPB-204ENST00000475243 DBN1Q16643 649 aa11.93□□□□□ -0.5
VAPB-204ENST00000475243 SERPINB2P05120 415 aa11.92□□□□□ -0.5
VAPB-204ENST00000475243 XPAP23025 273 aaPredicted RBP11.92□□□□□ -0.5
VAPB-204ENST00000475243 PDE1BQ01064 536 aa11.92□□□□□ -0.5
VAPB-204ENST00000475243 PIGSQ96S52 555 aa11.92□□□□□ -0.5
VAPB-204ENST00000475243 ZNF215Q9UL58 517 aaPredicted RBP11.92□□□□□ -0.5
VAPB-204ENST00000475243 TCOF1Q13428 1488 aaKnown RBP11.92□□□□□ -0.5
VAPB-204ENST00000475243 SMAP1Q8IYB5 467 aaPredicted RBP11.92□□□□□ -0.5
VAPB-204ENST00000475243 TRIML1Q8N9V2 468 aa11.92□□□□□ -0.5
VAPB-204ENST00000475243 UBN1Q9NPG3 1134 aa11.92□□□□□ -0.5
VAPB-204ENST00000475243 YEATS2Q9ULM3 1422 aa11.92□□□□□ -0.5
VAPB-204ENST00000475243 GFPT2O94808 682 aa11.92□□□□□ -0.5
VAPB-204ENST00000475243 HOXA13P31271 388 aaPredicted RBP11.92□□□□□ -0.5
VAPB-204ENST00000475243 TFDP1Q14186 410 aa11.92□□□□□ -0.5
VAPB-204ENST00000475243 RASEFQ8IZ41 740 aa11.92□□□□□ -0.5
VAPB-204ENST00000475243 DNAAF3Q8N9W5 541 aa11.92□□□□□ -0.5
VAPB-204ENST00000475243 CFAP61Q8NHU2 1237 aa11.92□□□□□ -0.5
VAPB-204ENST00000475243 BCAS4Q8TDM0 211 aa11.92□□□□□ -0.5
VAPB-204ENST00000475243 SPDL1Q96EA4 605 aa11.92□□□□□ -0.5
VAPB-204ENST00000475243 UBE2TQ9NPD8 197 aaPredicted RBP11.92□□□□□ -0.5
VAPB-204ENST00000475243 RIPOR2Q9Y4F9 1068 aa11.92□□□□□ -0.5
VAPB-204ENST00000475243 GCC2Q8IWJ2 1684 aa11.92□□□□□ -0.5
VAPB-204ENST00000475243 PASKQ96RG2 1323 aa11.92□□□□□ -0.5
VAPB-204ENST00000475243 USP17L3A6NCW0 530 aa11.92□□□□□ -0.5
VAPB-204ENST00000475243 USP17L4A6NCW7 530 aa11.92□□□□□ -0.5
VAPB-204ENST00000475243 PFDN6O15212 129 aa11.92□□□□□ -0.5
VAPB-204ENST00000475243 TCP1P17987 556 aaKnown RBP11.92□□□□□ -0.5
VAPB-204ENST00000475243 CD58P19256 250 aa11.92□□□□□ -0.5
VAPB-204ENST00000475243 GARSP41250 739 aaKnown RBP11.92□□□□□ -0.5
VAPB-204ENST00000475243 USP17L1Q7RTZ2 530 aa11.92□□□□□ -0.5
VAPB-204ENST00000475243 TBK1Q9UHD2 729 aa11.92□□□□□ -0.5
VAPB-204ENST00000475243 BAG5Q9UL15 447 aa11.92□□□□□ -0.5
VAPB-204ENST00000475243 GOLGA8KD6RF30 607 aa11.92□□□□□ -0.5
VAPB-204ENST00000475243 FMNL1O95466 1100 aaPredicted RBP11.92□□□□□ -0.5
VAPB-204ENST00000475243 UBE3CQ15386 1083 aa11.92□□□□□ -0.5
VAPB-204ENST00000475243 AOC3Q16853 763 aa11.92□□□□□ -0.5
VAPB-204ENST00000475243 KIAA1841Q6NSI8 718 aa11.92□□□□□ -0.5
VAPB-204ENST00000475243 CYP4F22Q6NT55 531 aa11.92□□□□□ -0.5
VAPB-204ENST00000475243 FAM186BQ8IYM0 893 aa11.92□□□□□ -0.5
VAPB-204ENST00000475243 ACTN1P12814 892 aa11.92□□□□□ -0.5
VAPB-204ENST00000475243 OSBPP22059 807 aa11.92□□□□□ -0.5
VAPB-204ENST00000475243 DDIT3P35638 169 aa11.92□□□□□ -0.5
VAPB-204ENST00000475243 RETREG2Q8NC44 543 aa11.92□□□□□ -0.5
VAPB-204ENST00000475243 MIS12Q9H081 205 aa11.92□□□□□ -0.5
VAPB-204ENST00000475243 LRFN2Q9ULH4 789 aa11.92□□□□□ -0.5
VAPB-204ENST00000475243 LEMD3Q9Y2U8 911 aa11.92□□□□□ -0.5
VAPB-204ENST00000475243 MYO5CQ9NQX4 1742 aa11.92□□□□□ -0.5
VAPB-204ENST00000475243 ADAMTS12P58397 1594 aa11.92□□□□□ -0.5
VAPB-204ENST00000475243 GPATCH4Q5T3I0 446 aaKnown RBP11.92□□□□□ -0.5
VAPB-204ENST00000475243 APOA5Q6Q788 366 aa11.92□□□□□ -0.5
VAPB-204ENST00000475243 NLGN1Q8N2Q7 840 aa11.92□□□□□ -0.5
VAPB-204ENST00000475243 CPSF3Q9UKF6 684 aaKnown RBP11.92□□□□□ -0.5
VAPB-204ENST00000475243 SEMA3EO15041 775 aa11.91□□□□□ -0.5
VAPB-204ENST00000475243 MX2P20592 715 aa11.91□□□□□ -0.5
VAPB-204ENST00000475243 CCDC93Q567U6 631 aa11.91□□□□□ -0.5
VAPB-204ENST00000475243 ZMYM1Q5SVZ6 1142 aa11.91□□□□□ -0.5
VAPB-204ENST00000475243 SCARA5Q6ZMJ2 495 aa11.91□□□□□ -0.5
VAPB-204ENST00000475243 LCORLQ8N3X6 602 aa11.91□□□□□ -0.5
VAPB-204ENST00000475243 FAM133AQ8N9E0 248 aa11.91□□□□□ -0.5
VAPB-204ENST00000475243 CDKL2Q92772 493 aa11.91□□□□□ -0.5
VAPB-204ENST00000475243 ATP6V1E2Q96A05 226 aa11.91□□□□□ -0.5
VAPB-204ENST00000475243 CALN1Q9BXU9 219 aa11.91□□□□□ -0.5
VAPB-204ENST00000475243 PDE11AQ9HCR9 933 aa11.91□□□□□ -0.5
VAPB-204ENST00000475243 ATF5Q9Y2D1 282 aaPredicted RBP11.91□□□□□ -0.5
VAPB-204ENST00000475243 ANGPTL3Q9Y5C1 460 aa11.91□□□□□ -0.5
VAPB-204ENST00000475243 CYP21A2P08686 494 aa11.91□□□□□ -0.5
VAPB-204ENST00000475243 C2orf54Q08AI8 447 aa11.91□□□□□ -0.5
VAPB-204ENST00000475243 DPCR1Q3MIW9 517 aa11.91□□□□□ -0.5
VAPB-204ENST00000475243 PPP1R13BQ96KQ4 1090 aa11.91□□□□□ -0.5
VAPB-204ENST00000475243 FOXP1Q9H334 677 aaPredicted RBP11.91□□□□□ -0.5
VAPB-204ENST00000475243 GCNT4Q9P109 453 aa11.91□□□□□ -0.5
VAPB-204ENST00000475243 BCAP29Q9UHQ4 241 aa11.91□□□□□ -0.5
VAPB-204ENST00000475243 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.91□□□□□ -0.5
VAPB-204ENST00000475243 AFPP02771 609 aaKnown RBP11.91□□□□□ -0.5
VAPB-204ENST00000475243 CCND2P30279 289 aa11.91□□□□□ -0.5
VAPB-204ENST00000475243 PPP2R5EQ16537 467 aa11.91□□□□□ -0.5
VAPB-204ENST00000475243 KCTD6Q8NC69 237 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms