RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 CCDC136Q96JN2 1154 aa14.2□□□□□ -0.14
SSR1-205ENST00000475213 TMEM87BQ96K49 555 aa14.2□□□□□ -0.14
SSR1-205ENST00000475213 SEZ6LQ9BYH1 1024 aa14.2□□□□□ -0.14
SSR1-205ENST00000475213 MAP3K20Q9NYL2 800 aaKnown RBP14.2□□□□□ -0.14
SSR1-205ENST00000475213 A6NJR5 290 aa14.19□□□□□ -0.14
SSR1-205ENST00000475213 CDC45O75419 566 aa14.19□□□□□ -0.14
SSR1-205ENST00000475213 NR3C2P08235 984 aa14.19□□□□□ -0.14
SSR1-205ENST00000475213 C7P10643 843 aa14.19□□□□□ -0.14
SSR1-205ENST00000475213 HOXA13P31271 388 aaPredicted RBP14.19□□□□□ -0.14
SSR1-205ENST00000475213 LIFRP42702 1097 aa14.19□□□□□ -0.14
SSR1-205ENST00000475213 TRAF1Q13077 416 aa14.19□□□□□ -0.14
SSR1-205ENST00000475213 LY6KQ17RY6 165 aa14.19□□□□□ -0.14
SSR1-205ENST00000475213 BRDTQ58F21 947 aaPredicted RBP14.19□□□□□ -0.14
SSR1-205ENST00000475213 NFXL1Q6ZNB6 911 aa14.19□□□□□ -0.14
SSR1-205ENST00000475213 CTCFLQ8NI51 663 aaPredicted RBP14.19□□□□□ -0.14
SSR1-205ENST00000475213 PIBF1Q8WXW3 757 aa14.19□□□□□ -0.14
SSR1-205ENST00000475213 SPOCK2Q92563 424 aa14.19□□□□□ -0.14
SSR1-205ENST00000475213 LRRC2Q9BYS8 371 aa14.19□□□□□ -0.14
SSR1-205ENST00000475213 TRPV6Q9H1D0 765 aa14.19□□□□□ -0.14
SSR1-205ENST00000475213 CCDC69A6NI79 296 aa14.18□□□□□ -0.14
SSR1-205ENST00000475213 GCOM1H8Y6P7 765 aaPredicted RBP14.18□□□□□ -0.14
SSR1-205ENST00000475213 B4GALT4O60513 344 aa14.18□□□□□ -0.14
SSR1-205ENST00000475213 EIF3JO75822 258 aaKnown RBP14.18□□□□□ -0.14
SSR1-205ENST00000475213 POLR2MP0CAP2 368 aa14.18□□□□□ -0.14
SSR1-205ENST00000475213 KIF5BP33176 963 aa14.18□□□□□ -0.14
SSR1-205ENST00000475213 GSE1Q14687 1217 aa14.18□□□□□ -0.14
SSR1-205ENST00000475213 RNF20Q5VTR2 975 aa14.18□□□□□ -0.14
SSR1-205ENST00000475213 PDCD2LQ9BRP1 358 aa14.18□□□□□ -0.14
SSR1-205ENST00000475213 MTG1Q9BT17 334 aaPredicted RBP14.18□□□□□ -0.14
SSR1-205ENST00000475213 SPZ1Q9BXG8 430 aa14.18□□□□□ -0.14
SSR1-205ENST00000475213 PPP1R12CQ9BZL4 782 aa14.18□□□□□ -0.14
SSR1-205ENST00000475213 KPNA6O60684 536 aa14.17□□□□□ -0.14
SSR1-205ENST00000475213 PLEKHA8P1O95397 391 aa14.17□□□□□ -0.14
SSR1-205ENST00000475213 GH1P01241 217 aa14.17□□□□□ -0.14
SSR1-205ENST00000475213 MYCLP12524 364 aaPredicted RBP14.17□□□□□ -0.14
SSR1-205ENST00000475213 RXRAP19793 462 aa14.17□□□□□ -0.14
SSR1-205ENST00000475213 SMARCA1P28370 1054 aa14.17□□□□□ -0.14
SSR1-205ENST00000475213 CYP2C18P33260 490 aa14.17□□□□□ -0.14
SSR1-205ENST00000475213 ARHGAP1Q07960 439 aa14.17□□□□□ -0.14
SSR1-205ENST00000475213 PPIGQ13427 754 aaKnown RBP eCLIP14.17□□□□□ -0.14
SSR1-205ENST00000475213 PGM5Q15124 567 aa14.17□□□□□ -0.14
SSR1-205ENST00000475213 TMEM199Q8N511 208 aa14.17□□□□□ -0.14
SSR1-205ENST00000475213 SRBD1Q8N5C6 995 aaKnown RBP14.17□□□□□ -0.14
SSR1-205ENST00000475213 RRP36Q96EU6 259 aaKnown RBP14.17□□□□□ -0.14
SSR1-205ENST00000475213 RNPC3Q96LT9 517 aaKnown RBP14.17□□□□□ -0.14
SSR1-205ENST00000475213 LZTS2Q9BRK4 669 aa14.17□□□□□ -0.14
SSR1-205ENST00000475213 ALDH8A1Q9H2A2 487 aaPredicted RBP14.17□□□□□ -0.14
SSR1-205ENST00000475213 HIPK3Q9H422 1215 aa14.17□□□□□ -0.14
SSR1-205ENST00000475213 MTMR10Q9NXD2 777 aa14.17□□□□□ -0.14
SSR1-205ENST00000475213 DDX41Q9UJV9 622 aaKnown RBP14.17□□□□□ -0.14
SSR1-205ENST00000475213 UMODL1Q5DID0 1318 aa14.16□□□□□ -0.14
SSR1-205ENST00000475213 RGS20O76081 388 aa14.16□□□□□ -0.14
SSR1-205ENST00000475213 MMP3P08254 477 aa14.16□□□□□ -0.14
SSR1-205ENST00000475213 CALM1P0DP23 149 aa14.16□□□□□ -0.14
SSR1-205ENST00000475213 CALM2P0DP24 149 aa14.16□□□□□ -0.14
SSR1-205ENST00000475213 CALM3P0DP25 149 aa14.16□□□□□ -0.14
SSR1-205ENST00000475213 CSF2RAP15509 400 aa14.16□□□□□ -0.14
SSR1-205ENST00000475213 GNAQP50148 359 aa14.16□□□□□ -0.14
SSR1-205ENST00000475213 NBPF20Q3BBV1 942 aa14.16□□□□□ -0.14
SSR1-205ENST00000475213 TSGA10IPQ3SY00 556 aa14.16□□□□□ -0.14
SSR1-205ENST00000475213 FAM109BQ6ICB4 259 aaPredicted RBP14.16□□□□□ -0.14
SSR1-205ENST00000475213 C16orf59Q7L2K0 433 aa14.16□□□□□ -0.14
SSR1-205ENST00000475213 VSIG10LQ86VR7 867 aa14.16□□□□□ -0.14
SSR1-205ENST00000475213 SGMS1Q86VZ5 419 aa14.16□□□□□ -0.14
SSR1-205ENST00000475213 FCHSD1Q86WN1 690 aa14.16□□□□□ -0.14
SSR1-205ENST00000475213 RAB11FIP4Q86YS3 637 aa14.16□□□□□ -0.14
SSR1-205ENST00000475213 CMTR1Q8N1G2 835 aaKnown RBP14.16□□□□□ -0.14
SSR1-205ENST00000475213 IL31RAQ8NI17 732 aa14.16□□□□□ -0.14
SSR1-205ENST00000475213 AFG1LQ8WV93 481 aa14.16□□□□□ -0.14
SSR1-205ENST00000475213 NEK1Q96PY6 1258 aa14.16□□□□□ -0.14
SSR1-205ENST00000475213 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.16□□□□□ -0.14
SSR1-205ENST00000475213 NOC4LQ9BVI4 516 aaKnown RBP14.16□□□□□ -0.14
SSR1-205ENST00000475213 TRMT13Q9NUP7 481 aaKnown RBP14.16□□□□□ -0.14
SSR1-205ENST00000475213 SLC12A7Q9Y666 1083 aa14.16□□□□□ -0.14
SSR1-205ENST00000475213 MRVI1Q9Y6F6 885 aa14.16□□□□□ -0.14
SSR1-205ENST00000475213 TRIP12Q14669 1992 aaPredicted RBP14.16□□□□□ -0.14
SSR1-205ENST00000475213 ACRP10323 421 aa14.15□□□□□ -0.14
SSR1-205ENST00000475213 SMAD3P84022 425 aaKnown RBP14.15□□□□□ -0.14
SSR1-205ENST00000475213 ADCK5Q3MIX3 580 aa14.15□□□□□ -0.14
SSR1-205ENST00000475213 TMEM240Q5SV17 173 aa14.15□□□□□ -0.14
SSR1-205ENST00000475213 NFRKBQ6P4R8 1299 aa14.15□□□□□ -0.14
SSR1-205ENST00000475213 PPP1R13LQ8WUF5 828 aa14.15□□□□□ -0.14
SSR1-205ENST00000475213 SEC63Q9UGP8 760 aaKnown RBP14.15□□□□□ -0.14
SSR1-205ENST00000475213 SCN5AQ14524 2016 aa14.15□□□□□ -0.14
SSR1-205ENST00000475213 DOCK5Q9H7D0 1870 aa14.14□□□□□ -0.15
SSR1-205ENST00000475213 SUPT20HL2P0C7V6 817 aa14.14□□□□□ -0.15
SSR1-205ENST00000475213 CCND2P30279 289 aa14.14□□□□□ -0.15
SSR1-205ENST00000475213 CCL23P55773 120 aa14.14□□□□□ -0.15
SSR1-205ENST00000475213 EXOSC10Q01780 885 aaKnown RBP14.14□□□□□ -0.15
SSR1-205ENST00000475213 FAM47CQ5HY64 1035 aa14.14□□□□□ -0.15
SSR1-205ENST00000475213 DHX32Q7L7V1 743 aaKnown RBP14.14□□□□□ -0.15
SSR1-205ENST00000475213 MICU3Q86XE3 530 aa14.14□□□□□ -0.15
SSR1-205ENST00000475213 FANCBQ8NB91 859 aa14.14□□□□□ -0.15
SSR1-205ENST00000475213 EMID1Q96A84 441 aaPredicted RBP14.14□□□□□ -0.15
SSR1-205ENST00000475213 ZFP91Q96JP5 570 aaPredicted RBP14.14□□□□□ -0.15
SSR1-205ENST00000475213 TCEANC2Q96MN5 208 aa14.14□□□□□ -0.15
SSR1-205ENST00000475213 WNT8AQ9H1J5 351 aa14.14□□□□□ -0.15
SSR1-205ENST00000475213 IL23AQ9NPF7 189 aa14.14□□□□□ -0.15
SSR1-205ENST00000475213 PCDHB8Q9UN66 801 aa14.14□□□□□ -0.15
SSR1-205ENST00000475213 CDH23Q9H251 3354 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms