RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 CCDC155Q8N6L0 562 aa18.25■□□□□ 0.51
SRRT-209ENST00000474896 KAT2BQ92831 832 aa18.25■□□□□ 0.51
SRRT-209ENST00000474896 CTAGE1Q96RT6 745 aa18.25■□□□□ 0.51
SRRT-209ENST00000474896 IWS1Q96ST2 819 aa18.25■□□□□ 0.51
SRRT-209ENST00000474896 ZSCAN10Q96SZ4 725 aaPredicted RBP18.25■□□□□ 0.51
SRRT-209ENST00000474896 RMDN3Q96TC7 470 aa18.25■□□□□ 0.51
SRRT-209ENST00000474896 BAIAP3O94812 1187 aa18.24■□□□□ 0.51
SRRT-209ENST00000474896 KCNQ1P51787 676 aa18.24■□□□□ 0.51
SRRT-209ENST00000474896 GPNMBQ14956 572 aa18.24■□□□□ 0.51
SRRT-209ENST00000474896 QRICH1Q2TAL8 776 aa18.24■□□□□ 0.51
SRRT-209ENST00000474896 ARHGEF16Q5VV41 709 aa18.24■□□□□ 0.51
SRRT-209ENST00000474896 CWC27Q6UX04 472 aaKnown RBP18.24■□□□□ 0.51
SRRT-209ENST00000474896 SESTD1Q86VW0 696 aa18.24■□□□□ 0.51
SRRT-209ENST00000474896 FBXO11Q86XK2 927 aa18.24■□□□□ 0.51
SRRT-209ENST00000474896 CAGE1Q8TC20 777 aa18.24■□□□□ 0.51
SRRT-209ENST00000474896 AFAP1L1Q8TED9 768 aa18.24■□□□□ 0.51
SRRT-209ENST00000474896 ZSWIM5Q9P217 1185 aa18.24■□□□□ 0.51
SRRT-209ENST00000474896 RAPGEFL1Q9UHV5 662 aa18.24■□□□□ 0.51
SRRT-209ENST00000474896 DDX41Q9UJV9 622 aaKnown RBP18.24■□□□□ 0.51
SRRT-209ENST00000474896 MRPL11Q9Y3B7 192 aaKnown RBP18.24■□□□□ 0.51
SRRT-209ENST00000474896 B4E1Z4 1266 aa18.23■□□□□ 0.51
SRRT-209ENST00000474896 TLL1O43897 1013 aa18.23■□□□□ 0.51
SRRT-209ENST00000474896 DHX16O60231 1041 aaKnown RBP18.23■□□□□ 0.51
SRRT-209ENST00000474896 PARP1P09874 1014 aaKnown RBP18.23■□□□□ 0.51
SRRT-209ENST00000474896 SELPP16109 830 aa18.23■□□□□ 0.51
SRRT-209ENST00000474896 KCNJ6P48051 423 aa18.23■□□□□ 0.51
SRRT-209ENST00000474896 DGKDQ16760 1214 aa18.23■□□□□ 0.51
SRRT-209ENST00000474896 ASPRV1Q53RT3 343 aa18.23■□□□□ 0.51
SRRT-209ENST00000474896 PLEKHM2Q8IWE5 1019 aa18.23■□□□□ 0.51
SRRT-209ENST00000474896 JMJD4Q9H9V9 463 aa18.23■□□□□ 0.51
SRRT-209ENST00000474896 EIF3JO75822 258 aaKnown RBP18.22■□□□□ 0.51
SRRT-209ENST00000474896 EIF2AK2P19525 551 aaKnown RBP18.22■□□□□ 0.51
SRRT-209ENST00000474896 NT5C2P49902 561 aa18.22■□□□□ 0.51
SRRT-209ENST00000474896 LRRC8DQ7L1W4 858 aa18.22■□□□□ 0.51
SRRT-209ENST00000474896 TMCO2Q7Z6W1 182 aaPredicted RBP18.22■□□□□ 0.51
SRRT-209ENST00000474896 C7orf31Q8N865 590 aa18.22■□□□□ 0.51
SRRT-209ENST00000474896 ENAHQ8N8S7 591 aaPredicted RBP18.22■□□□□ 0.51
SRRT-209ENST00000474896 DHX38Q92620 1227 aaKnown RBP18.22■□□□□ 0.51
SRRT-209ENST00000474896 ALG1Q9BT22 464 aa18.22■□□□□ 0.51
SRRT-209ENST00000474896 ZBED2Q9BTP6 218 aa18.22■□□□□ 0.51
SRRT-209ENST00000474896 RWDD1Q9H446 243 aaPredicted RBP18.22■□□□□ 0.51
SRRT-209ENST00000474896 HDAC6Q9UBN7 1215 aa18.22■□□□□ 0.51
SRRT-209ENST00000474896 CFBP00751 764 aa18.21■□□□□ 0.51
SRRT-209ENST00000474896 NR3C2P08235 984 aa18.21■□□□□ 0.51
SRRT-209ENST00000474896 PSEN2P49810 448 aa18.21■□□□□ 0.51
SRRT-209ENST00000474896 WDR5P61964 334 aaKnown RBP18.21■□□□□ 0.51
SRRT-209ENST00000474896 GRB10Q13322 594 aa18.21■□□□□ 0.51
SRRT-209ENST00000474896 ERICH6BQ5W0A0 696 aa18.21■□□□□ 0.51
SRRT-209ENST00000474896 SPRED2Q7Z698 418 aa18.21■□□□□ 0.51
SRRT-209ENST00000474896 CHD1LQ86WJ1 897 aa18.21■□□□□ 0.51
SRRT-209ENST00000474896 SMC5Q8IY18 1101 aa18.21■□□□□ 0.51
SRRT-209ENST00000474896 DIAPH3Q9NSV4 1193 aa18.21■□□□□ 0.51
SRRT-209ENST00000474896 GTF2IRD1Q9UHL9 959 aa18.21■□□□□ 0.51
SRRT-209ENST00000474896 COG5Q9UP83 839 aa18.21■□□□□ 0.51
SRRT-209ENST00000474896 KIAA1217Q5T5P2 1943 aa18.21■□□□□ 0.51
SRRT-209ENST00000474896 TANC1Q9C0D5 1861 aa18.2■□□□□ 0.5
SRRT-209ENST00000474896 LCHNA4D1U4 455 aa18.2■□□□□ 0.5
SRRT-209ENST00000474896 NBNO60934 754 aa18.2■□□□□ 0.5
SRRT-209ENST00000474896 PARNO95453 639 aaKnown RBP18.2■□□□□ 0.5
SRRT-209ENST00000474896 CKBP12277 381 aa18.2■□□□□ 0.5
SRRT-209ENST00000474896 LAMC2Q13753 1193 aa18.2■□□□□ 0.5
SRRT-209ENST00000474896 IMMTQ16891 758 aaKnown RBP18.2■□□□□ 0.5
SRRT-209ENST00000474896 CNKSR3Q6P9H4 555 aa18.2■□□□□ 0.5
SRRT-209ENST00000474896 DHX37Q8IY37 1157 aaKnown RBP18.2■□□□□ 0.5
SRRT-209ENST00000474896 EMID1Q96A84 441 aaPredicted RBP18.2■□□□□ 0.5
SRRT-209ENST00000474896 OSBPL3Q9H4L5 887 aa18.2■□□□□ 0.5
SRRT-209ENST00000474896 PXMP2Q9NR77 195 aa18.2■□□□□ 0.5
SRRT-209ENST00000474896 MRVI1Q9Y6F6 885 aa18.2■□□□□ 0.5
SRRT-209ENST00000474896 MYH7BA7E2Y1 1941 aa18.19■□□□□ 0.5
SRRT-209ENST00000474896 MYH6P13533 1939 aa18.19■□□□□ 0.5
SRRT-209ENST00000474896 LPXNO60711 386 aa18.19■□□□□ 0.5
SRRT-209ENST00000474896 IGHDP01880 384 aa18.19■□□□□ 0.5
SRRT-209ENST00000474896 CXCL10P02778 98 aa18.19■□□□□ 0.5
SRRT-209ENST00000474896 DEFB103AP81534 67 aa18.19■□□□□ 0.5
SRRT-209ENST00000474896 RBL2Q08999 1139 aa18.19■□□□□ 0.5
SRRT-209ENST00000474896 MFSD10Q14728 455 aa18.19■□□□□ 0.5
SRRT-209ENST00000474896 KIAA0753Q2KHM9 967 aa18.19■□□□□ 0.5
SRRT-209ENST00000474896 STAG2Q8N3U4 1231 aa18.19■□□□□ 0.5
SRRT-209ENST00000474896 PPTC7Q8NI37 304 aa18.19■□□□□ 0.5
SRRT-209ENST00000474896 HLA-CQ95604 372 aa18.19■□□□□ 0.5
SRRT-209ENST00000474896 DSCC1Q9BVC3 393 aa18.19■□□□□ 0.5
SRRT-209ENST00000474896 KATNAL1Q9BW62 490 aa18.19■□□□□ 0.5
SRRT-209ENST00000474896 AMNQ9BXJ7 453 aa18.19■□□□□ 0.5
SRRT-209ENST00000474896 KRT23Q9C075 422 aa18.19■□□□□ 0.5
SRRT-209ENST00000474896 CTNNA3Q9UI47 895 aa18.19■□□□□ 0.5
SRRT-209ENST00000474896 RBAK-RBAKDNI3L0D1 243 aa18.18■□□□□ 0.5
SRRT-209ENST00000474896 HIP1O00291 1037 aa18.18■□□□□ 0.5
SRRT-209ENST00000474896 ZNF286BP0CG31 522 aa18.18■□□□□ 0.5
SRRT-209ENST00000474896 MYCLP12524 364 aaPredicted RBP18.18■□□□□ 0.5
SRRT-209ENST00000474896 HSD17B4P51659 736 aa18.18■□□□□ 0.5
SRRT-209ENST00000474896 ZNF200P98182 395 aaPredicted RBP18.18■□□□□ 0.5
SRRT-209ENST00000474896 NUCB1Q02818 461 aa18.18■□□□□ 0.5
SRRT-209ENST00000474896 PTK7Q13308 1070 aa18.18■□□□□ 0.5
SRRT-209ENST00000474896 TCTN1Q2MV58 587 aa18.18■□□□□ 0.5
SRRT-209ENST00000474896 UBAC1Q9BSL1 405 aa18.18■□□□□ 0.5
SRRT-209ENST00000474896 BDP1A6H8Y1 2624 aa18.18■□□□□ 0.5
SRRT-209ENST00000474896 PTPRSQ13332 1948 aa18.17■□□□□ 0.5
SRRT-209ENST00000474896 REV3LO60673 3130 aa18.17■□□□□ 0.5
SRRT-209ENST00000474896 ABHD14A-ACY1A0A1B0GW23 586 aa18.17■□□□□ 0.5
SRRT-209ENST00000474896 KLRF2D3W0D1 207 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms