RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 TBX3O15119 743 aa7.51□□□□□ -1.21
ATG4A-207ENST00000474825 POLR2MP0CAP2 368 aa7.51□□□□□ -1.21
ATG4A-207ENST00000474825 PFKFB1P16118 471 aa7.51□□□□□ -1.21
ATG4A-207ENST00000474825 MCM7P33993 719 aa7.51□□□□□ -1.21
ATG4A-207ENST00000474825 GJA5P36382 358 aa7.51□□□□□ -1.21
ATG4A-207ENST00000474825 PRKG1Q13976 671 aa7.51□□□□□ -1.21
ATG4A-207ENST00000474825 PDIA5Q14554 519 aa7.51□□□□□ -1.21
ATG4A-207ENST00000474825 TMEM132BQ14DG7 1078 aa7.51□□□□□ -1.21
ATG4A-207ENST00000474825 Q4G0T1 1027 aa7.51□□□□□ -1.21
ATG4A-207ENST00000474825 GPAT2Q6NUI2 795 aa7.51□□□□□ -1.21
ATG4A-207ENST00000474825 LRSAM1Q6UWE0 723 aa7.51□□□□□ -1.21
ATG4A-207ENST00000474825 CCDC73Q6ZRK6 1079 aa7.51□□□□□ -1.21
ATG4A-207ENST00000474825 FASTKD5Q7L8L6 764 aaKnown RBP7.51□□□□□ -1.21
ATG4A-207ENST00000474825 LAPTM4BQ86VI4 370 aa7.51□□□□□ -1.21
ATG4A-207ENST00000474825 MCF2L2Q86YR7 1114 aa7.51□□□□□ -1.21
ATG4A-207ENST00000474825 MB21D1Q8N884 522 aa7.51□□□□□ -1.21
ATG4A-207ENST00000474825 IGSF22Q8N9C0 903 aa7.51□□□□□ -1.21
ATG4A-207ENST00000474825 TBC1D5Q92609 795 aa7.51□□□□□ -1.21
ATG4A-207ENST00000474825 LENG9Q96B70 501 aa7.51□□□□□ -1.21
ATG4A-207ENST00000474825 ATG4CQ96DT6 458 aa7.51□□□□□ -1.21
ATG4A-207ENST00000474825 AK8Q96MA6 479 aa7.51□□□□□ -1.21
ATG4A-207ENST00000474825 AGBL1Q96MI9 1066 aa7.51□□□□□ -1.21
ATG4A-207ENST00000474825 CLIC6Q96NY7 704 aa7.51□□□□□ -1.21
ATG4A-207ENST00000474825 TANGO6Q9C0B7 1094 aa7.51□□□□□ -1.21
ATG4A-207ENST00000474825 CSRNP2Q9H175 543 aa7.51□□□□□ -1.21
ATG4A-207ENST00000474825 ELP3Q9H9T3 547 aa7.51□□□□□ -1.21
ATG4A-207ENST00000474825 KCNMB3Q9NPA1 279 aa7.51□□□□□ -1.21
ATG4A-207ENST00000474825 AGTPBP1Q9UPW5 1226 aa7.51□□□□□ -1.21
ATG4A-207ENST00000474825 RABGAP1Q9Y3P9 1069 aa7.51□□□□□ -1.21
ATG4A-207ENST00000474825 MRVI1Q9Y6F6 885 aa7.51□□□□□ -1.21
ATG4A-207ENST00000474825 OTOFQ9HC10 1997 aa7.51□□□□□ -1.21
ATG4A-207ENST00000474825 IGLV3-22A0A075B6J6 115 aa7.5□□□□□ -1.21
ATG4A-207ENST00000474825 TESPA1A2RU30 521 aaPredicted RBP7.5□□□□□ -1.21
ATG4A-207ENST00000474825 SLC26A4O43511 780 aa7.5□□□□□ -1.21
ATG4A-207ENST00000474825 NEMFO60524 1076 aa7.5□□□□□ -1.21
ATG4A-207ENST00000474825 CCNT1O60563 726 aaKnown RBP7.5□□□□□ -1.21
ATG4A-207ENST00000474825 ZNF202O95125 648 aa7.5□□□□□ -1.21
ATG4A-207ENST00000474825 OR52Z1P0C646 297 aa7.5□□□□□ -1.21
ATG4A-207ENST00000474825 ATP2B1P20020 1258 aa7.5□□□□□ -1.21
ATG4A-207ENST00000474825 SYKP43405 635 aa7.5□□□□□ -1.21
ATG4A-207ENST00000474825 ARHGAP4P98171 946 aa7.5□□□□□ -1.21
ATG4A-207ENST00000474825 MDM2Q00987 491 aaPredicted RBP7.5□□□□□ -1.21
ATG4A-207ENST00000474825 FMR1Q06787 632 aaKnown RBP eCLIP7.5□□□□□ -1.21
ATG4A-207ENST00000474825 E2F4Q16254 413 aa7.5□□□□□ -1.21
ATG4A-207ENST00000474825 LETM2Q2VYF4 491 aa7.5□□□□□ -1.21
ATG4A-207ENST00000474825 DEFB115Q30KQ5 88 aa7.5□□□□□ -1.21
ATG4A-207ENST00000474825 USH1GQ495M9 461 aa7.5□□□□□ -1.21
ATG4A-207ENST00000474825 TREML2Q5T2D2 321 aa7.5□□□□□ -1.21
ATG4A-207ENST00000474825 CST9Q5W186 159 aa7.5□□□□□ -1.21
ATG4A-207ENST00000474825 CCDC174Q6PII3 467 aa7.5□□□□□ -1.21
ATG4A-207ENST00000474825 DTHD1Q6ZMT9 781 aa7.5□□□□□ -1.21
ATG4A-207ENST00000474825 USP49Q70CQ1 688 aa7.5□□□□□ -1.21
ATG4A-207ENST00000474825 SH3RF1Q7Z6J0 888 aa7.5□□□□□ -1.21
ATG4A-207ENST00000474825 GAS2L3Q86XJ1 694 aa7.5□□□□□ -1.21
ATG4A-207ENST00000474825 SPATA20Q8TB22 786 aa7.5□□□□□ -1.21
ATG4A-207ENST00000474825 HAS1Q92839 578 aa7.5□□□□□ -1.21
ATG4A-207ENST00000474825 OPTNQ96CV9 577 aa7.5□□□□□ -1.21
ATG4A-207ENST00000474825 WNK4Q96J92 1243 aa7.5□□□□□ -1.21
ATG4A-207ENST00000474825 PYM1Q9BRP8 204 aaKnown RBP7.5□□□□□ -1.21
ATG4A-207ENST00000474825 TEX13BQ9BXU2 312 aa7.5□□□□□ -1.21
ATG4A-207ENST00000474825 CCSER1Q9C0I3 900 aa7.5□□□□□ -1.21
ATG4A-207ENST00000474825 CRISPLD2Q9H0B8 497 aa7.5□□□□□ -1.21
ATG4A-207ENST00000474825 GZF1Q9H116 711 aaPredicted RBP7.5□□□□□ -1.21
ATG4A-207ENST00000474825 NUP62CLQ9H1M0 184 aa7.5□□□□□ -1.21
ATG4A-207ENST00000474825 GBA2Q9HCG7 927 aaPredicted RBP7.5□□□□□ -1.21
ATG4A-207ENST00000474825 RAVER2Q9HCJ3 691 aaKnown RBP7.5□□□□□ -1.21
ATG4A-207ENST00000474825 FAM13BQ9NYF5 915 aa7.5□□□□□ -1.21
ATG4A-207ENST00000474825 USP25Q9UHP3 1055 aa7.5□□□□□ -1.21
ATG4A-207ENST00000474825 KCNH3Q9ULD8 1083 aa7.5□□□□□ -1.21
ATG4A-207ENST00000474825 CCPG1Q9ULG6 757 aa7.5□□□□□ -1.21
ATG4A-207ENST00000474825 LOC285556D6RIA3 1793 aa7.5□□□□□ -1.21
ATG4A-207ENST00000474825 PARP14Q460N5 1801 aa7.5□□□□□ -1.21
ATG4A-207ENST00000474825 SPDYE3A6NKU9 549 aa7.49□□□□□ -1.21
ATG4A-207ENST00000474825 MEIS1O00470 390 aa7.49□□□□□ -1.21
ATG4A-207ENST00000474825 NFIBO00712 420 aa7.49□□□□□ -1.21
ATG4A-207ENST00000474825 ACTN4O43707 911 aaKnown RBP7.49□□□□□ -1.21
ATG4A-207ENST00000474825 SLC37A4O43826 429 aa7.49□□□□□ -1.21
ATG4A-207ENST00000474825 KINO60870 393 aaKnown RBP7.49□□□□□ -1.21
ATG4A-207ENST00000474825 CNMDO75829 334 aa7.49□□□□□ -1.21
ATG4A-207ENST00000474825 TDP2O95551 362 aa7.49□□□□□ -1.21
ATG4A-207ENST00000474825 ZBTB48P10074 688 aaPredicted RBP7.49□□□□□ -1.21
ATG4A-207ENST00000474825 BCRP11274 1271 aa7.49□□□□□ -1.21
ATG4A-207ENST00000474825 TAL1P17542 331 aaPredicted RBP7.49□□□□□ -1.21
ATG4A-207ENST00000474825 SNAPC2Q13487 334 aa7.49□□□□□ -1.21
ATG4A-207ENST00000474825 LONRF3Q496Y0 759 aa7.49□□□□□ -1.21
ATG4A-207ENST00000474825 MUM1L1Q5H9M0 696 aa7.49□□□□□ -1.21
ATG4A-207ENST00000474825 PPP1R15BQ5SWA1 713 aa7.49□□□□□ -1.21
ATG4A-207ENST00000474825 NT5DC1Q5TFE4 455 aa7.49□□□□□ -1.21
ATG4A-207ENST00000474825 XRRA1Q6P2D8 792 aa7.49□□□□□ -1.21
ATG4A-207ENST00000474825 KRBA2Q6ZNG9 492 aa7.49□□□□□ -1.21
ATG4A-207ENST00000474825 NIPA1Q7RTP0 329 aa7.49□□□□□ -1.21
ATG4A-207ENST00000474825 RIOX2Q8IUF8 465 aa7.49□□□□□ -1.21
ATG4A-207ENST00000474825 C2orf69Q8N8R5 385 aa7.49□□□□□ -1.21
ATG4A-207ENST00000474825 CHST13Q8NET6 341 aa7.49□□□□□ -1.21
ATG4A-207ENST00000474825 ETNPPLQ8TBG4 499 aa7.49□□□□□ -1.21
ATG4A-207ENST00000474825 SYTL5Q8TDW5 730 aaPredicted RBP7.49□□□□□ -1.21
ATG4A-207ENST00000474825 SYMPKQ92797 1274 aaKnown RBP7.49□□□□□ -1.21
ATG4A-207ENST00000474825 SLC10A4Q96EP9 437 aa7.49□□□□□ -1.21
ATG4A-207ENST00000474825 FAM20AQ96MK3 541 aa7.49□□□□□ -1.21
ATG4A-207ENST00000474825 COL20A1Q9P218 1284 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms