RNA–Protein interactions for RNA: ENST00000474144.5

TMEM54-204, Transcript of transmembrane protein 54, humanhuman

TSL 3

Gene TMEM54, Length 748 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-204ENST00000474144 RNF20Q5VTR2 975 aa23.02■■□□□ 1.28
TMEM54-204ENST00000474144 TMEM199Q8N511 208 aa23.02■■□□□ 1.28
TMEM54-204ENST00000474144 SAMD3Q8N6K7 520 aa23.02■■□□□ 1.28
TMEM54-204ENST00000474144 TCEANC2Q96MN5 208 aa23.02■■□□□ 1.28
TMEM54-204ENST00000474144 HIPK3Q9H422 1215 aa23.02■■□□□ 1.28
TMEM54-204ENST00000474144 CCL23P55773 120 aa23.01■■□□□ 1.27
TMEM54-204ENST00000474144 TRAF1Q13077 416 aa23.01■■□□□ 1.27
TMEM54-204ENST00000474144 PPIGQ13427 754 aaKnown RBP eCLIP23.01■■□□□ 1.27
TMEM54-204ENST00000474144 VSIG10LQ86VR7 867 aa23.01■■□□□ 1.27
TMEM54-204ENST00000474144 RRP36Q96EU6 259 aaKnown RBP23.01■■□□□ 1.27
TMEM54-204ENST00000474144 FAM161BQ96MY7 647 aa23.01■■□□□ 1.27
TMEM54-204ENST00000474144 NEK1Q96PY6 1258 aa23.01■■□□□ 1.27
TMEM54-204ENST00000474144 NOC4LQ9BVI4 516 aaKnown RBP23.01■■□□□ 1.27
TMEM54-204ENST00000474144 SLC12A7Q9Y666 1083 aa23.01■■□□□ 1.27
TMEM54-204ENST00000474144 MRVI1Q9Y6F6 885 aa23.01■■□□□ 1.27
TMEM54-204ENST00000474144 KPNA6O60684 536 aa23■■□□□ 1.27
TMEM54-204ENST00000474144 MMP3P08254 477 aa23■■□□□ 1.27
TMEM54-204ENST00000474144 CYP2C9P11712 490 aa23■■□□□ 1.27
TMEM54-204ENST00000474144 SMARCA1P28370 1054 aa23■■□□□ 1.27
TMEM54-204ENST00000474144 CHMP4BP1P59074 171 aa23■■□□□ 1.27
TMEM54-204ENST00000474144 FAM47CQ5HY64 1035 aa23■■□□□ 1.27
TMEM54-204ENST00000474144 TMEM240Q5SV17 173 aa23■■□□□ 1.27
TMEM54-204ENST00000474144 WNT8AQ9H1J5 351 aa23■■□□□ 1.27
TMEM54-204ENST00000474144 hCG_1642624A0A1W2PR95 340 aa22.99■■□□□ 1.27
TMEM54-204ENST00000474144 SORBS3O60504 671 aa22.99■■□□□ 1.27
TMEM54-204ENST00000474144 CALM1P0DP23 149 aa22.99■■□□□ 1.27
TMEM54-204ENST00000474144 CALM2P0DP24 149 aa22.99■■□□□ 1.27
TMEM54-204ENST00000474144 CALM3P0DP25 149 aa22.99■■□□□ 1.27
TMEM54-204ENST00000474144 EXOSC10Q01780 885 aaKnown RBP22.99■■□□□ 1.27
TMEM54-204ENST00000474144 FAM109BQ6ICB4 259 aaPredicted RBP22.99■■□□□ 1.27
TMEM54-204ENST00000474144 CCDC82Q8N4S0 544 aa22.99■■□□□ 1.27
TMEM54-204ENST00000474144 GPKOWQ92917 476 aaPredicted RBP eCLIP22.99■■□□□ 1.27
TMEM54-204ENST00000474144 LZTS2Q9BRK4 669 aa22.99■■□□□ 1.27
TMEM54-204ENST00000474144 MYH7BA7E2Y1 1941 aa22.99■■□□□ 1.27
TMEM54-204ENST00000474144 GNAQP50148 359 aa22.98■■□□□ 1.27
TMEM54-204ENST00000474144 SMAD3P84022 425 aaKnown RBP22.98■■□□□ 1.27
TMEM54-204ENST00000474144 TSGA10IPQ3SY00 556 aa22.98■■□□□ 1.27
TMEM54-204ENST00000474144 ZNF365Q70YC5 407 aa22.98■■□□□ 1.27
TMEM54-204ENST00000474144 SGMS1Q86VZ5 419 aa22.98■■□□□ 1.27
TMEM54-204ENST00000474144 MICU3Q86XE3 530 aa22.98■■□□□ 1.27
TMEM54-204ENST00000474144 FANCBQ8NB91 859 aa22.98■■□□□ 1.27
TMEM54-204ENST00000474144 KAT2BQ92831 832 aa22.98■■□□□ 1.27
TMEM54-204ENST00000474144 GUCD1Q96NT3 240 aa22.98■■□□□ 1.27
TMEM54-204ENST00000474144 SEC63Q9UGP8 760 aaKnown RBP22.98■■□□□ 1.27
TMEM54-204ENST00000474144 CCND2P30279 289 aa22.97■■□□□ 1.27
TMEM54-204ENST00000474144 SP2Q02086 613 aa22.97■■□□□ 1.27
TMEM54-204ENST00000474144 ZNF697Q5TEC3 545 aa22.97■■□□□ 1.27
TMEM54-204ENST00000474144 NFRKBQ6P4R8 1299 aa22.97■■□□□ 1.27
TMEM54-204ENST00000474144 USP17L6PQ6QN14 398 aa22.97■■□□□ 1.27
TMEM54-204ENST00000474144 DHX32Q7L7V1 743 aaKnown RBP22.97■■□□□ 1.27
TMEM54-204ENST00000474144 DHX37Q8IY37 1157 aaKnown RBP22.97■■□□□ 1.27
TMEM54-204ENST00000474144 SCLYQ96I15 445 aa22.97■■□□□ 1.27
TMEM54-204ENST00000474144 IL23AQ9NPF7 189 aa22.97■■□□□ 1.27
TMEM54-204ENST00000474144 BRPF3Q9ULD4 1205 aa22.97■■□□□ 1.27
TMEM54-204ENST00000474144 MRPS9P82933 396 aaKnown RBP22.96■■□□□ 1.27
TMEM54-204ENST00000474144 TMTC3Q6ZXV5 915 aa22.96■■□□□ 1.27
TMEM54-204ENST00000474144 EMID1Q96A84 441 aaPredicted RBP22.96■■□□□ 1.27
TMEM54-204ENST00000474144 BCAS3Q9H6U6 928 aa22.96■■□□□ 1.27
TMEM54-204ENST00000474144 FRMPD4Q14CM0 1322 aa22.96■■□□□ 1.27
TMEM54-204ENST00000474144 CDH23Q9H251 3354 aa22.96■■□□□ 1.27
TMEM54-204ENST00000474144 MEIS2O14770 477 aa22.95■■□□□ 1.26
TMEM54-204ENST00000474144 SUPT20HL2P0C7V6 817 aa22.95■■□□□ 1.26
TMEM54-204ENST00000474144 CPA1P15085 419 aa22.95■■□□□ 1.26
TMEM54-204ENST00000474144 CASTP20810 708 aaKnown RBP22.95■■□□□ 1.26
TMEM54-204ENST00000474144 LAMC2Q13753 1193 aa22.95■■□□□ 1.26
TMEM54-204ENST00000474144 APOA5Q6Q788 366 aa22.95■■□□□ 1.26
TMEM54-204ENST00000474144 SMARCC2Q8TAQ2 1214 aa22.95■■□□□ 1.26
TMEM54-204ENST00000474144 VWCEQ96DN2 955 aa22.95■■□□□ 1.26
TMEM54-204ENST00000474144 TTYH1Q9H313 450 aaPredicted RBP22.95■■□□□ 1.26
TMEM54-204ENST00000474144 GGPS1O95749 300 aa22.94■■□□□ 1.26
TMEM54-204ENST00000474144 UBA1P22314 1058 aaKnown RBP22.94■■□□□ 1.26
TMEM54-204ENST00000474144 DGKDQ16760 1214 aa22.94■■□□□ 1.26
TMEM54-204ENST00000474144 CELF3Q5SZQ8 465 aaKnown RBP22.94■■□□□ 1.26
TMEM54-204ENST00000474144 RASIP1Q5U651 963 aa22.94■■□□□ 1.26
TMEM54-204ENST00000474144 MYSM1Q5VVJ2 828 aa22.94■■□□□ 1.26
TMEM54-204ENST00000474144 PSRC1Q6PGN9 363 aaPredicted RBP22.94■■□□□ 1.26
TMEM54-204ENST00000474144 PPTC7Q8NI37 304 aa22.94■■□□□ 1.26
TMEM54-204ENST00000474144 SEMA6BQ9H3T3 888 aa22.94■■□□□ 1.26
TMEM54-204ENST00000474144 RTEL1Q9NZ71 1219 aa22.94■■□□□ 1.26
TMEM54-204ENST00000474144 CXXC1Q9P0U4 656 aaPredicted RBP22.94■■□□□ 1.26
TMEM54-204ENST00000474144 STXBP5LQ9Y2K9 1186 aa22.94■■□□□ 1.26
TMEM54-204ENST00000474144 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.93■■□□□ 1.26
TMEM54-204ENST00000474144 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.93■■□□□ 1.26
TMEM54-204ENST00000474144 GRXCR1A8MXD5 290 aa22.93■■□□□ 1.26
TMEM54-204ENST00000474144 PIK3CDO00329 1044 aa22.93■■□□□ 1.26
TMEM54-204ENST00000474144 ZNF286BP0CG31 522 aa22.93■■□□□ 1.26
TMEM54-204ENST00000474144 PTPN11Q06124 597 aaPredicted RBP22.93■■□□□ 1.26
TMEM54-204ENST00000474144 HSDL1Q3SXM5 330 aa22.93■■□□□ 1.26
TMEM54-204ENST00000474144 GDF6Q6KF10 455 aaPredicted RBP22.93■■□□□ 1.26
TMEM54-204ENST00000474144 KCNV1Q6PIU1 500 aa22.93■■□□□ 1.26
TMEM54-204ENST00000474144 SYNE3Q6ZMZ3 975 aa22.93■■□□□ 1.26
TMEM54-204ENST00000474144 CUL5Q93034 780 aa22.93■■□□□ 1.26
TMEM54-204ENST00000474144 CTAGE1Q96RT6 745 aa22.93■■□□□ 1.26
TMEM54-204ENST00000474144 SCN5AQ14524 2016 aa22.92■■□□□ 1.26
TMEM54-204ENST00000474144 FGBP02675 491 aa22.92■■□□□ 1.26
TMEM54-204ENST00000474144 SEMA3FQ13275 785 aa22.92■■□□□ 1.26
TMEM54-204ENST00000474144 KRT32Q14532 448 aa22.92■■□□□ 1.26
TMEM54-204ENST00000474144 OTOP2Q7RTS6 562 aa22.92■■□□□ 1.26
TMEM54-204ENST00000474144 HERVK_113Q902F9 699 aa22.92■■□□□ 1.26
TMEM54-204ENST00000474144 KCNB2Q92953 911 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms