RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 AK8Q96MA6 479 aa11.61□□□□□ -0.55
PRPF38A-202ENST00000474048 RNF39Q9H2S5 420 aa11.61□□□□□ -0.55
PRPF38A-202ENST00000474048 PXMP2Q9NR77 195 aa11.61□□□□□ -0.55
PRPF38A-202ENST00000474048 DDX19AQ9NUU7 478 aaKnown RBP11.61□□□□□ -0.55
PRPF38A-202ENST00000474048 RBPJLQ9UBG7 517 aa11.61□□□□□ -0.55
PRPF38A-202ENST00000474048 MORF4L1Q9UBU8 362 aa11.61□□□□□ -0.55
PRPF38A-202ENST00000474048 CCDC39Q9UFE4 941 aa11.61□□□□□ -0.55
PRPF38A-202ENST00000474048 RASSF10A6NK89 507 aa11.6□□□□□ -0.55
PRPF38A-202ENST00000474048 IGF2BP3O00425 579 aaKnown RBP eCLIP11.6□□□□□ -0.55
PRPF38A-202ENST00000474048 TBX3O15119 743 aa11.6□□□□□ -0.55
PRPF38A-202ENST00000474048 STRNO43815 780 aa11.6□□□□□ -0.55
PRPF38A-202ENST00000474048 CNMDO75829 334 aa11.6□□□□□ -0.55
PRPF38A-202ENST00000474048 CMA1P23946 247 aa11.6□□□□□ -0.55
PRPF38A-202ENST00000474048 SYKP43405 635 aa11.6□□□□□ -0.55
PRPF38A-202ENST00000474048 FAM160A1Q05DH4 1040 aa11.6□□□□□ -0.55
PRPF38A-202ENST00000474048 KIF22Q14807 665 aa11.6□□□□□ -0.55
PRPF38A-202ENST00000474048 PGM5Q15124 567 aa11.6□□□□□ -0.55
PRPF38A-202ENST00000474048 STXBP2Q15833 593 aa11.6□□□□□ -0.55
PRPF38A-202ENST00000474048 Q4G0T1 1027 aa11.6□□□□□ -0.55
PRPF38A-202ENST00000474048 CEP55Q53EZ4 464 aa11.6□□□□□ -0.55
PRPF38A-202ENST00000474048 CCDC183Q5T5S1 534 aa11.6□□□□□ -0.55
PRPF38A-202ENST00000474048 CAVIN1Q6NZI2 390 aaKnown RBP11.6□□□□□ -0.55
PRPF38A-202ENST00000474048 CEP57L1Q8IYX8 460 aa11.6□□□□□ -0.55
PRPF38A-202ENST00000474048 CALML4Q96GE6 196 aa11.6□□□□□ -0.55
PRPF38A-202ENST00000474048 FAM20AQ96MK3 541 aa11.6□□□□□ -0.55
PRPF38A-202ENST00000474048 TAAR1Q96RJ0 339 aa11.6□□□□□ -0.55
PRPF38A-202ENST00000474048 IWS1Q96ST2 819 aa11.6□□□□□ -0.55
PRPF38A-202ENST00000474048 TXNRD2Q9NNW7 524 aa11.6□□□□□ -0.55
PRPF38A-202ENST00000474048 CPA4Q9UI42 421 aa11.6□□□□□ -0.55
PRPF38A-202ENST00000474048 FBXO2Q9UK22 296 aaPredicted RBP11.6□□□□□ -0.55
PRPF38A-202ENST00000474048 PCDHA12Q9UN75 941 aa11.6□□□□□ -0.55
PRPF38A-202ENST00000474048 CYP3A7-CYP3A51PA0A087WV96 503 aa11.59□□□□□ -0.55
PRPF38A-202ENST00000474048 ASB14A6NK59 587 aa11.59□□□□□ -0.55
PRPF38A-202ENST00000474048 FAM155AB1AL88 458 aaPredicted RBP11.59□□□□□ -0.55
PRPF38A-202ENST00000474048 SLC37A4O43826 429 aa11.59□□□□□ -0.55
PRPF38A-202ENST00000474048 GAS7O60861 476 aa11.59□□□□□ -0.55
PRPF38A-202ENST00000474048 LETM1O95202 739 aaPredicted RBP11.59□□□□□ -0.55
PRPF38A-202ENST00000474048 CYP3A7P24462 503 aa11.59□□□□□ -0.55
PRPF38A-202ENST00000474048 CIITAP33076 1130 aa11.59□□□□□ -0.55
PRPF38A-202ENST00000474048 TECP42680 631 aa11.59□□□□□ -0.55
PRPF38A-202ENST00000474048 MTMR1Q13613 665 aa11.59□□□□□ -0.55
PRPF38A-202ENST00000474048 KRT79Q5XKE5 535 aa11.59□□□□□ -0.55
PRPF38A-202ENST00000474048 HAUS3Q68CZ6 603 aa11.59□□□□□ -0.55
PRPF38A-202ENST00000474048 NIPA1Q7RTP0 329 aa11.59□□□□□ -0.55
PRPF38A-202ENST00000474048 PLEKHH3Q7Z736 793 aa11.59□□□□□ -0.55
PRPF38A-202ENST00000474048 DPP9Q86TI2 863 aa11.59□□□□□ -0.55
PRPF38A-202ENST00000474048 CLIC6Q96NY7 704 aa11.59□□□□□ -0.55
PRPF38A-202ENST00000474048 PTPN18Q99952 460 aa11.59□□□□□ -0.55
PRPF38A-202ENST00000474048 MXRA8Q9BRK3 442 aa11.59□□□□□ -0.55
PRPF38A-202ENST00000474048 PDCD2LQ9BRP1 358 aa11.59□□□□□ -0.55
PRPF38A-202ENST00000474048 ZNF577Q9BSK1 485 aa11.59□□□□□ -0.55
PRPF38A-202ENST00000474048 TEKT3Q9BXF9 490 aa11.59□□□□□ -0.55
PRPF38A-202ENST00000474048 WDR11Q9BZH6 1224 aa11.59□□□□□ -0.55
PRPF38A-202ENST00000474048 CSRNP2Q9H175 543 aa11.59□□□□□ -0.55
PRPF38A-202ENST00000474048 NUP62CLQ9H1M0 184 aa11.59□□□□□ -0.55
PRPF38A-202ENST00000474048 TNMDQ9H2S6 317 aa11.59□□□□□ -0.55
PRPF38A-202ENST00000474048 TTC12Q9H892 705 aaPredicted RBP11.59□□□□□ -0.55
PRPF38A-202ENST00000474048 EFCC1Q9HA90 598 aa11.59□□□□□ -0.55
PRPF38A-202ENST00000474048 LRWD1Q9UFC0 647 aa11.59□□□□□ -0.55
PRPF38A-202ENST00000474048 RPTORQ8N122 1335 aa11.59□□□□□ -0.55
PRPF38A-202ENST00000474048 KDM3AQ9Y4C1 1321 aa11.59□□□□□ -0.55
PRPF38A-202ENST00000474048 A0A1B0GVL5 298 aa11.58□□□□□ -0.56
PRPF38A-202ENST00000474048 CTAGE5O15320 804 aa11.58□□□□□ -0.56
PRPF38A-202ENST00000474048 CA12O43570 354 aa11.58□□□□□ -0.56
PRPF38A-202ENST00000474048 TLR2O60603 784 aa11.58□□□□□ -0.56
PRPF38A-202ENST00000474048 NR3C2P08235 984 aa11.58□□□□□ -0.56
PRPF38A-202ENST00000474048 PFKFB1P16118 471 aa11.58□□□□□ -0.56
PRPF38A-202ENST00000474048 TM4SF4P48230 202 aa11.58□□□□□ -0.56
PRPF38A-202ENST00000474048 ALDH5A1P51649 535 aaPredicted RBP11.58□□□□□ -0.56
PRPF38A-202ENST00000474048 LRCH2Q5VUJ6 765 aa11.58□□□□□ -0.56
PRPF38A-202ENST00000474048 RESP18Q5W5W9 173 aa11.58□□□□□ -0.56
PRPF38A-202ENST00000474048 KANK3Q6NY19 840 aa11.58□□□□□ -0.56
PRPF38A-202ENST00000474048 ABRAQ8N0Z2 381 aa11.58□□□□□ -0.56
PRPF38A-202ENST00000474048 SDF4Q9BRK5 362 aa11.58□□□□□ -0.56
PRPF38A-202ENST00000474048 BEGAINQ9BUH8 593 aa11.58□□□□□ -0.56
PRPF38A-202ENST00000474048 GZF1Q9H116 711 aaPredicted RBP11.58□□□□□ -0.56
PRPF38A-202ENST00000474048 DACT1Q9NYF0 836 aa11.58□□□□□ -0.56
PRPF38A-202ENST00000474048 COL20A1Q9P218 1284 aa11.58□□□□□ -0.56
PRPF38A-202ENST00000474048 KCNH3Q9ULD8 1083 aa11.58□□□□□ -0.56
PRPF38A-202ENST00000474048 FRMPD4Q14CM0 1322 aa11.58□□□□□ -0.56
PRPF38A-202ENST00000474048 LOC102724159A0A0B4J2E5 919 aa11.57□□□□□ -0.56
PRPF38A-202ENST00000474048 SLC15A5A6NIM6 579 aa11.57□□□□□ -0.56
PRPF38A-202ENST00000474048 WNT7AO00755 349 aa11.57□□□□□ -0.56
PRPF38A-202ENST00000474048 TNPO2O14787 897 aaKnown RBP11.57□□□□□ -0.56
PRPF38A-202ENST00000474048 MAFGO15525 162 aa11.57□□□□□ -0.56
PRPF38A-202ENST00000474048 PEX10O60683 326 aa11.57□□□□□ -0.56
PRPF38A-202ENST00000474048 BCRP11274 1271 aa11.57□□□□□ -0.56
PRPF38A-202ENST00000474048 MAP2K2P36507 400 aa11.57□□□□□ -0.56
PRPF38A-202ENST00000474048 STAT6P42226 847 aa11.57□□□□□ -0.56
PRPF38A-202ENST00000474048 FXR2P51116 673 aaKnown RBP eCLIP11.57□□□□□ -0.56
PRPF38A-202ENST00000474048 CRHR2Q13324 411 aa11.57□□□□□ -0.56
PRPF38A-202ENST00000474048 PDIA5Q14554 519 aa11.57□□□□□ -0.56
PRPF38A-202ENST00000474048 PWP2Q15269 919 aaKnown RBP11.57□□□□□ -0.56
PRPF38A-202ENST00000474048 Q3C1V9 767 aa11.57□□□□□ -0.56
PRPF38A-202ENST00000474048 SPECC1Q5M775 1068 aa11.57□□□□□ -0.56
PRPF38A-202ENST00000474048 NCAPH2Q6IBW4 605 aa11.57□□□□□ -0.56
PRPF38A-202ENST00000474048 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.57□□□□□ -0.56
PRPF38A-202ENST00000474048 GPR142Q7Z601 462 aa11.57□□□□□ -0.56
PRPF38A-202ENST00000474048 CABP7Q86V35 215 aa11.57□□□□□ -0.56
PRPF38A-202ENST00000474048 CNNM3Q8NE01 707 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms