RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 MRVI1Q9Y6F6 885 aa15.77■□□□□ 0.12
USF1-205ENST00000473969 MOXD2PA6NHM9 499 aa15.76■□□□□ 0.11
USF1-205ENST00000473969 NLRP5P59047 1200 aa15.76■□□□□ 0.11
USF1-205ENST00000473969 KCNA10Q16322 511 aa15.76■□□□□ 0.11
USF1-205ENST00000473969 PKN1Q16512 942 aa15.76■□□□□ 0.11
USF1-205ENST00000473969 OR6J1Q8NGC5 347 aa15.76■□□□□ 0.11
USF1-205ENST00000473969 WASF1Q92558 559 aa15.76■□□□□ 0.11
USF1-205ENST00000473969 VTI1AQ96AJ9 217 aa15.76■□□□□ 0.11
USF1-205ENST00000473969 SH3GLB2Q9NR46 395 aa15.76■□□□□ 0.11
USF1-205ENST00000473969 PCDHA6Q9UN73 950 aa15.76■□□□□ 0.11
USF1-205ENST00000473969 GNEQ9Y223 722 aaKnown RBP15.76■□□□□ 0.11
USF1-205ENST00000473969 PCDHA8Q9Y5H6 950 aa15.76■□□□□ 0.11
USF1-205ENST00000473969 CENPFP49454 3210 aa15.75■□□□□ 0.11
USF1-205ENST00000473969 ESYT2A0FGR8 921 aa15.75■□□□□ 0.11
USF1-205ENST00000473969 EVI5O60447 810 aa15.75■□□□□ 0.11
USF1-205ENST00000473969 ADAMTS4O75173 837 aa15.75■□□□□ 0.11
USF1-205ENST00000473969 MNX1P50219 401 aaPredicted RBP15.75■□□□□ 0.11
USF1-205ENST00000473969 CPT1AP50416 773 aa15.75■□□□□ 0.11
USF1-205ENST00000473969 AP3B2Q13367 1082 aa15.75■□□□□ 0.11
USF1-205ENST00000473969 ME3Q16798 604 aa15.75■□□□□ 0.11
USF1-205ENST00000473969 NLRX1Q86UT6 975 aa15.75■□□□□ 0.11
USF1-205ENST00000473969 NECAB1Q8N987 351 aa15.75■□□□□ 0.11
USF1-205ENST00000473969 FERMT2Q96AC1 680 aa15.75■□□□□ 0.11
USF1-205ENST00000473969 BACH2Q9BYV9 841 aa15.75■□□□□ 0.11
USF1-205ENST00000473969 UPF3AQ9H1J1 476 aaKnown RBP15.75■□□□□ 0.11
USF1-205ENST00000473969 ADCY6O43306 1168 aa15.74■□□□□ 0.11
USF1-205ENST00000473969 GH1P01241 217 aa15.74■□□□□ 0.11
USF1-205ENST00000473969 COL6A1P12109 1028 aa15.74■□□□□ 0.11
USF1-205ENST00000473969 CST5P28325 142 aaPredicted RBP15.74■□□□□ 0.11
USF1-205ENST00000473969 ACLYP53396 1101 aa15.74■□□□□ 0.11
USF1-205ENST00000473969 ATN1P54259 1190 aaPredicted RBP15.74■□□□□ 0.11
USF1-205ENST00000473969 FSCN1Q16658 493 aaKnown RBP15.74■□□□□ 0.11
USF1-205ENST00000473969 PCNX4Q63HM2 1172 aa15.74■□□□□ 0.11
USF1-205ENST00000473969 TYW1BQ6NUM6 668 aa15.74■□□□□ 0.11
USF1-205ENST00000473969 KLHDC9Q8NEP7 349 aa15.74■□□□□ 0.11
USF1-205ENST00000473969 IL31RAQ8NI17 732 aa15.74■□□□□ 0.11
USF1-205ENST00000473969 GTF3C6Q969F1 213 aa15.74■□□□□ 0.11
USF1-205ENST00000473969 GLT1D1Q96MS3 346 aa15.74■□□□□ 0.11
USF1-205ENST00000473969 ZMYND12Q9H0C1 365 aa15.74■□□□□ 0.11
USF1-205ENST00000473969 RTEL1Q9NZ71 1219 aa15.74■□□□□ 0.11
USF1-205ENST00000473969 VPS54Q9P1Q0 977 aa15.74■□□□□ 0.11
USF1-205ENST00000473969 ORC3Q9UBD5 711 aaPredicted RBP15.74■□□□□ 0.11
USF1-205ENST00000473969 PHF24Q9UPV7 400 aa15.74■□□□□ 0.11
USF1-205ENST00000473969 NR2E3Q9Y5X4 410 aa15.74■□□□□ 0.11
USF1-205ENST00000473969 FRMPD4Q14CM0 1322 aa15.73■□□□□ 0.11
USF1-205ENST00000473969 MCM3APO60318 1980 aa15.73■□□□□ 0.11
USF1-205ENST00000473969 CABYRO75952 493 aa15.73■□□□□ 0.11
USF1-205ENST00000473969 TGFB3P10600 412 aa15.73■□□□□ 0.11
USF1-205ENST00000473969 ZNF76P36508 570 aa15.73■□□□□ 0.11
USF1-205ENST00000473969 BEX3Q00994 111 aa15.73■□□□□ 0.11
USF1-205ENST00000473969 LY6KQ17RY6 165 aa15.73■□□□□ 0.11
USF1-205ENST00000473969 JAKMIP3Q5VZ66 844 aa15.73■□□□□ 0.11
USF1-205ENST00000473969 DHX37Q8IY37 1157 aaKnown RBP15.73■□□□□ 0.11
USF1-205ENST00000473969 FAM177A1Q8N128 213 aaPredicted RBP15.73■□□□□ 0.11
USF1-205ENST00000473969 REXO1Q8N1G1 1221 aaKnown RBP15.73■□□□□ 0.11
USF1-205ENST00000473969 ZFP91Q96JP5 570 aaPredicted RBP15.73■□□□□ 0.11
USF1-205ENST00000473969 TBC1D32Q96NH3 1257 aa15.73■□□□□ 0.11
USF1-205ENST00000473969 KIF2CQ99661 725 aa15.73■□□□□ 0.11
USF1-205ENST00000473969 STARD7Q9NQZ5 370 aa15.73■□□□□ 0.11
USF1-205ENST00000473969 SH2B1Q9NRF2 756 aaPredicted RBP15.73■□□□□ 0.11
USF1-205ENST00000473969 LCTP09848 1927 aa15.72■□□□□ 0.11
USF1-205ENST00000473969 STK36Q9NRP7 1315 aa15.72■□□□□ 0.11
USF1-205ENST00000473969 MYADML2A6NDP7 307 aa15.72■□□□□ 0.11
USF1-205ENST00000473969 FIBPO43427 364 aa15.72■□□□□ 0.11
USF1-205ENST00000473969 ASGR1P07306 291 aa15.72■□□□□ 0.11
USF1-205ENST00000473969 NKX3-2P78367 333 aa15.72■□□□□ 0.11
USF1-205ENST00000473969 GALNT17Q6IS24 598 aa15.72■□□□□ 0.11
USF1-205ENST00000473969 CCDC62Q6P9F0 684 aa15.72■□□□□ 0.11
USF1-205ENST00000473969 SLC39A5Q6ZMH5 540 aa15.72■□□□□ 0.11
USF1-205ENST00000473969 CDHR1Q96JP9 859 aa15.72■□□□□ 0.11
USF1-205ENST00000473969 ANO3Q9BYT9 981 aa15.72■□□□□ 0.11
USF1-205ENST00000473969 MLXIPQ9HAP2 919 aa15.72■□□□□ 0.11
USF1-205ENST00000473969 POLR3EQ9NVU0 708 aa15.72■□□□□ 0.11
USF1-205ENST00000473969 DDX41Q9UJV9 622 aaKnown RBP15.72■□□□□ 0.11
USF1-205ENST00000473969 A0A1W2PQ45 241 aaPredicted RBP15.71■□□□□ 0.11
USF1-205ENST00000473969 A0A1W2PQY0 241 aa15.71■□□□□ 0.11
USF1-205ENST00000473969 KPNA6O60684 536 aa15.71■□□□□ 0.11
USF1-205ENST00000473969 ARIH2O95376 493 aa15.71■□□□□ 0.11
USF1-205ENST00000473969 LARGE1O95461 756 aa15.71■□□□□ 0.11
USF1-205ENST00000473969 MYL3P08590 195 aa15.71■□□□□ 0.11
USF1-205ENST00000473969 MCM2P49736 904 aa15.71■□□□□ 0.11
USF1-205ENST00000473969 MRPS9P82933 396 aaKnown RBP15.71■□□□□ 0.11
USF1-205ENST00000473969 LAMC2Q13753 1193 aa15.71■□□□□ 0.11
USF1-205ENST00000473969 TRIM29Q14134 588 aa15.71■□□□□ 0.11
USF1-205ENST00000473969 NEDD9Q14511 834 aa15.71■□□□□ 0.11
USF1-205ENST00000473969 TMEM63BQ5T3F8 832 aa15.71■□□□□ 0.11
USF1-205ENST00000473969 COPS5Q92905 334 aa15.71■□□□□ 0.11
USF1-205ENST00000473969 PGBD1Q96JS3 809 aa15.71■□□□□ 0.11
USF1-205ENST00000473969 TMEM260Q9NX78 707 aa15.71■□□□□ 0.11
USF1-205ENST00000473969 ELP1O95163 1332 aa15.7■□□□□ 0.1
USF1-205ENST00000473969 CLK2P49760 499 aaKnown RBP15.7■□□□□ 0.1
USF1-205ENST00000473969 IRX5P78411 483 aaPredicted RBP15.7■□□□□ 0.1
USF1-205ENST00000473969 CCSAPQ6IQ19 270 aaPredicted RBP15.7■□□□□ 0.1
USF1-205ENST00000473969 CCDC83Q8IWF9 413 aa15.7■□□□□ 0.1
USF1-205ENST00000473969 C7orf61Q8IZ16 206 aa15.7■□□□□ 0.1
USF1-205ENST00000473969 GIMAP8Q8ND71 665 aaPredicted RBP15.7■□□□□ 0.1
USF1-205ENST00000473969 GPRASP2Q96D09 838 aa15.7■□□□□ 0.1
USF1-205ENST00000473969 INPP4AQ96PE3 977 aaPredicted RBP15.7■□□□□ 0.1
USF1-205ENST00000473969 ALG1Q9BT22 464 aa15.7■□□□□ 0.1
USF1-205ENST00000473969 BRMS1Q9HCU9 246 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms