RNA–Protein interactions for RNA: ENST00000473349.1

BRD3-205, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-205ENST00000473349 GPATCH4Q5T3I0 446 aaKnown RBP11.07□□□□□ -0.64
BRD3-205ENST00000473349 SCFD2Q8WU76 684 aa11.07□□□□□ -0.64
BRD3-205ENST00000473349 AFG1LQ8WV93 481 aa11.07□□□□□ -0.64
BRD3-205ENST00000473349 MTG1Q9BT17 334 aaPredicted RBP11.07□□□□□ -0.64
BRD3-205ENST00000473349 POLR3EQ9NVU0 708 aa11.07□□□□□ -0.64
BRD3-205ENST00000473349 A6NJR5 290 aa11.06□□□□□ -0.64
BRD3-205ENST00000473349 PARP1P09874 1014 aaKnown RBP11.06□□□□□ -0.64
BRD3-205ENST00000473349 IGFBP4P22692 258 aa11.06□□□□□ -0.64
BRD3-205ENST00000473349 CPT1AP50416 773 aa11.06□□□□□ -0.64
BRD3-205ENST00000473349 PTH1RQ03431 593 aa11.06□□□□□ -0.64
BRD3-205ENST00000473349 IMMTQ16891 758 aaKnown RBP11.06□□□□□ -0.64
BRD3-205ENST00000473349 CCDC62Q6P9F0 684 aa11.06□□□□□ -0.64
BRD3-205ENST00000473349 SPRED2Q7Z698 418 aa11.06□□□□□ -0.64
BRD3-205ENST00000473349 TMCO2Q7Z6W1 182 aaPredicted RBP11.06□□□□□ -0.64
BRD3-205ENST00000473349 IQCA1Q86XH1 822 aa11.06□□□□□ -0.64
BRD3-205ENST00000473349 DNERQ8NFT8 737 aa11.06□□□□□ -0.64
BRD3-205ENST00000473349 ANKS1AQ92625 1134 aa11.06□□□□□ -0.64
BRD3-205ENST00000473349 CTAGE1Q96RT6 745 aa11.06□□□□□ -0.64
BRD3-205ENST00000473349 DSCC1Q9BVC3 393 aa11.06□□□□□ -0.64
BRD3-205ENST00000473349 MAF1Q9H063 256 aa11.06□□□□□ -0.64
BRD3-205ENST00000473349 CERS4Q9HA82 394 aa11.06□□□□□ -0.64
BRD3-205ENST00000473349 GPHNQ9NQX3 736 aaPredicted RBP11.06□□□□□ -0.64
BRD3-205ENST00000473349 MSRAQ9UJ68 235 aa11.06□□□□□ -0.64
BRD3-205ENST00000473349 SUPT16HQ9Y5B9 1047 aaKnown RBP11.06□□□□□ -0.64
BRD3-205ENST00000473349 SCN10AQ9Y5Y9 1956 aa11.05□□□□□ -0.64
BRD3-205ENST00000473349 CFBP00751 764 aa11.05□□□□□ -0.64
BRD3-205ENST00000473349 HOXA13P31271 388 aaPredicted RBP11.05□□□□□ -0.64
BRD3-205ENST00000473349 ARHGAP1Q07960 439 aa11.05□□□□□ -0.64
BRD3-205ENST00000473349 MYO9BQ13459 2157 aa11.05□□□□□ -0.64
BRD3-205ENST00000473349 SEC23AQ15436 765 aa11.05□□□□□ -0.64
BRD3-205ENST00000473349 FBXO11Q86XK2 927 aa11.05□□□□□ -0.64
BRD3-205ENST00000473349 MICALL1Q8N3F8 863 aa11.05□□□□□ -0.64
BRD3-205ENST00000473349 IL31RAQ8NI17 732 aa11.05□□□□□ -0.64
BRD3-205ENST00000473349 KAT2BQ92831 832 aa11.05□□□□□ -0.64
BRD3-205ENST00000473349 RMDN3Q96TC7 470 aa11.05□□□□□ -0.64
BRD3-205ENST00000473349 MPHOSPH6Q99547 160 aaKnown RBP11.05□□□□□ -0.64
BRD3-205ENST00000473349 SLC4A7Q9Y6M7 1214 aa11.05□□□□□ -0.64
BRD3-205ENST00000473349 ABCB11O95342 1321 aa11.05□□□□□ -0.64
BRD3-205ENST00000473349 TRANK1O15050 2925 aa11.05□□□□□ -0.64
BRD3-205ENST00000473349 EPOPA6NHQ4 379 aa11.04□□□□□ -0.64
BRD3-205ENST00000473349 MMP3P08254 477 aa11.04□□□□□ -0.64
BRD3-205ENST00000473349 ZNF286BP0CG31 522 aa11.04□□□□□ -0.64
BRD3-205ENST00000473349 ATP2A2P16615 1042 aaKnown RBP11.04□□□□□ -0.64
BRD3-205ENST00000473349 COL9A3Q14050 684 aaPredicted RBP11.04□□□□□ -0.64
BRD3-205ENST00000473349 RAB30Q15771 203 aa11.04□□□□□ -0.64
BRD3-205ENST00000473349 TCTN1Q2MV58 587 aa11.04□□□□□ -0.64
BRD3-205ENST00000473349 ASPRV1Q53RT3 343 aa11.04□□□□□ -0.64
BRD3-205ENST00000473349 IFIT1BQ5T764 474 aaKnown RBP11.04□□□□□ -0.64
BRD3-205ENST00000473349 TTC22Q5TAA0 569 aa11.04□□□□□ -0.64
BRD3-205ENST00000473349 ARHGEF16Q5VV41 709 aa11.04□□□□□ -0.64
BRD3-205ENST00000473349 KRT40Q6A162 431 aa11.04□□□□□ -0.64
BRD3-205ENST00000473349 GDF6Q6KF10 455 aaPredicted RBP11.04□□□□□ -0.64
BRD3-205ENST00000473349 HOMER1Q86YM7 354 aa11.04□□□□□ -0.64
BRD3-205ENST00000473349 RGS22Q8NE09 1264 aa11.04□□□□□ -0.64
BRD3-205ENST00000473349 NSUN6Q8TEA1 469 aaKnown RBP11.04□□□□□ -0.64
BRD3-205ENST00000473349 PIBF1Q8WXW3 757 aa11.04□□□□□ -0.64
BRD3-205ENST00000473349 DHX38Q92620 1227 aaKnown RBP11.04□□□□□ -0.64
BRD3-205ENST00000473349 GPKOWQ92917 476 aaPredicted RBP eCLIP11.04□□□□□ -0.64
BRD3-205ENST00000473349 GAS2L1Q99501 681 aaPredicted RBP11.04□□□□□ -0.64
BRD3-205ENST00000473349 UBAC1Q9BSL1 405 aa11.04□□□□□ -0.64
BRD3-205ENST00000473349 MTIF3Q9H2K0 278 aaKnown RBP11.04□□□□□ -0.64
BRD3-205ENST00000473349 BCAS3Q9H6U6 928 aa11.04□□□□□ -0.64
BRD3-205ENST00000473349 SLC28A3Q9HAS3 691 aa11.04□□□□□ -0.64
BRD3-205ENST00000473349 SCUBE2Q9NQ36 999 aa11.04□□□□□ -0.64
BRD3-205ENST00000473349 MAD2L2Q9UI95 211 aa11.04□□□□□ -0.64
BRD3-205ENST00000473349 B4DLN1 442 aa11.03□□□□□ -0.64
BRD3-205ENST00000473349 KLRF2D3W0D1 207 aa11.03□□□□□ -0.64
BRD3-205ENST00000473349 NKRFO15226 690 aaKnown RBP eCLIP11.03□□□□□ -0.64
BRD3-205ENST00000473349 RGS20O76081 388 aa11.03□□□□□ -0.64
BRD3-205ENST00000473349 CA3P07451 260 aa11.03□□□□□ -0.64
BRD3-205ENST00000473349 IQCF3P0C7M6 154 aa11.03□□□□□ -0.64
BRD3-205ENST00000473349 SUPT20HL2P0C7V6 817 aa11.03□□□□□ -0.64
BRD3-205ENST00000473349 MYCLP12524 364 aaPredicted RBP11.03□□□□□ -0.64
BRD3-205ENST00000473349 MRPL12P52815 198 aaKnown RBP11.03□□□□□ -0.64
BRD3-205ENST00000473349 ZNF200P98182 395 aaPredicted RBP11.03□□□□□ -0.64
BRD3-205ENST00000473349 HIC1Q14526 733 aa11.03□□□□□ -0.64
BRD3-205ENST00000473349 GPNMBQ14956 572 aa11.03□□□□□ -0.64
BRD3-205ENST00000473349 PTGISQ16647 500 aa11.03□□□□□ -0.64
BRD3-205ENST00000473349 CCDC178Q5BJE1 867 aa11.03□□□□□ -0.64
BRD3-205ENST00000473349 PPP2R2DQ66LE6 453 aa11.03□□□□□ -0.64
BRD3-205ENST00000473349 NFRKBQ6P4R8 1299 aa11.03□□□□□ -0.64
BRD3-205ENST00000473349 STOX1Q6ZVD7 989 aa11.03□□□□□ -0.64
BRD3-205ENST00000473349 RPUSD2Q8IZ73 545 aaKnown RBP11.03□□□□□ -0.64
BRD3-205ENST00000473349 WNT8BQ93098 351 aa11.03□□□□□ -0.64
BRD3-205ENST00000473349 ALG1Q9BT22 464 aa11.03□□□□□ -0.64
BRD3-205ENST00000473349 KRT23Q9C075 422 aa11.03□□□□□ -0.64
BRD3-205ENST00000473349 FTOQ9C0B1 505 aaKnown RBP eCLIP11.03□□□□□ -0.64
BRD3-205ENST00000473349 PXMP2Q9NR77 195 aa11.03□□□□□ -0.64
BRD3-205ENST00000473349 CTNNA3Q9UI47 895 aa11.03□□□□□ -0.64
BRD3-205ENST00000473349 DDX41Q9UJV9 622 aaKnown RBP11.03□□□□□ -0.64
BRD3-205ENST00000473349 TET1Q8NFU7 2136 aa11.03□□□□□ -0.64
BRD3-205ENST00000473349 RAD50Q92878 1312 aa11.03□□□□□ -0.64
BRD3-205ENST00000473349 HIP1O00291 1037 aa11.02□□□□□ -0.65
BRD3-205ENST00000473349 CYTH3O43739 400 aa11.02□□□□□ -0.65
BRD3-205ENST00000473349 GH1P01241 217 aa11.02□□□□□ -0.65
BRD3-205ENST00000473349 NR3C2P08235 984 aa11.02□□□□□ -0.65
BRD3-205ENST00000473349 CYP21A2P08686 494 aa11.02□□□□□ -0.65
BRD3-205ENST00000473349 CHMLP26374 656 aa11.02□□□□□ -0.65
BRD3-205ENST00000473349 PSEN1P49768 467 aa11.02□□□□□ -0.65
BRD3-205ENST00000473349 SP2Q02086 613 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms