RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 DOCK5Q9H7D0 1870 aa17.98■□□□□ 0.47
MRPL55-226ENST00000473066 DNAH12Q6ZR08 3092 aa17.97■□□□□ 0.47
MRPL55-226ENST00000473066 EPB41L2O43491 1005 aaKnown RBP17.97■□□□□ 0.47
MRPL55-226ENST00000473066 ARIH2O95376 493 aa17.97■□□□□ 0.47
MRPL55-226ENST00000473066 PSMC6P62333 389 aa17.97■□□□□ 0.47
MRPL55-226ENST00000473066 PURAQ00577 322 aaKnown RBP17.97■□□□□ 0.47
MRPL55-226ENST00000473066 FPGSQ05932 587 aa17.97■□□□□ 0.47
MRPL55-226ENST00000473066 GNPTABQ3T906 1256 aa17.97■□□□□ 0.47
MRPL55-226ENST00000473066 CCDC62Q6P9F0 684 aa17.97■□□□□ 0.47
MRPL55-226ENST00000473066 TBX21Q9UL17 535 aa17.97■□□□□ 0.47
MRPL55-226ENST00000473066 SNX14Q9Y5W7 946 aa17.97■□□□□ 0.47
MRPL55-226ENST00000473066 CNTNAP5Q8WYK1 1306 aa17.97■□□□□ 0.47
MRPL55-226ENST00000473066 A6NJR5 290 aa17.96■□□□□ 0.47
MRPL55-226ENST00000473066 RCAN1P53805 252 aa17.96■□□□□ 0.47
MRPL55-226ENST00000473066 LY6KQ17RY6 165 aa17.96■□□□□ 0.47
MRPL55-226ENST00000473066 LRIT3Q3SXY7 679 aa17.96■□□□□ 0.47
MRPL55-226ENST00000473066 FAM47CQ5HY64 1035 aa17.96■□□□□ 0.47
MRPL55-226ENST00000473066 HEATR3Q7Z4Q2 680 aa17.96■□□□□ 0.47
MRPL55-226ENST00000473066 KCNB2Q92953 911 aa17.96■□□□□ 0.47
MRPL55-226ENST00000473066 PPP1R12CQ9BZL4 782 aa17.96■□□□□ 0.47
MRPL55-226ENST00000473066 CCDC196A0A1B0GTZ2 297 aa17.95■□□□□ 0.46
MRPL55-226ENST00000473066 STAM2O75886 525 aa17.95■□□□□ 0.46
MRPL55-226ENST00000473066 TIMP1P01033 207 aa17.95■□□□□ 0.46
MRPL55-226ENST00000473066 MMP3P08254 477 aa17.95■□□□□ 0.46
MRPL55-226ENST00000473066 METAP2P50579 478 aaKnown RBP eCLIP17.95■□□□□ 0.46
MRPL55-226ENST00000473066 ARHGAP1Q07960 439 aa17.95■□□□□ 0.46
MRPL55-226ENST00000473066 Q6ZUG5 572 aa17.95■□□□□ 0.46
MRPL55-226ENST00000473066 DHX37Q8IY37 1157 aaKnown RBP17.95■□□□□ 0.46
MRPL55-226ENST00000473066 SLC43A3Q8NBI5 491 aa17.95■□□□□ 0.46
MRPL55-226ENST00000473066 IL31RAQ8NI17 732 aa17.95■□□□□ 0.46
MRPL55-226ENST00000473066 AFG1LQ8WV93 481 aa17.95■□□□□ 0.46
MRPL55-226ENST00000473066 hCG_1642624A0A1W2PR95 340 aa17.94■□□□□ 0.46
MRPL55-226ENST00000473066 SOX1O00570 391 aaPredicted RBP17.94■□□□□ 0.46
MRPL55-226ENST00000473066 CPA1P15085 419 aa17.94■□□□□ 0.46
MRPL55-226ENST00000473066 CASTP20810 708 aaKnown RBP17.94■□□□□ 0.46
MRPL55-226ENST00000473066 CHMP4BP1P59074 171 aa17.94■□□□□ 0.46
MRPL55-226ENST00000473066 PPIGQ13427 754 aaKnown RBP eCLIP17.94■□□□□ 0.461e-6■■■■□ 24.6
MRPL55-226ENST00000473066 LAMC2Q13753 1193 aa17.94■□□□□ 0.46
MRPL55-226ENST00000473066 VSIG10LQ86VR7 867 aa17.94■□□□□ 0.46
MRPL55-226ENST00000473066 TMEM199Q8N511 208 aa17.94■□□□□ 0.46
MRPL55-226ENST00000473066 BRF1Q92994 677 aa17.94■□□□□ 0.46
MRPL55-226ENST00000473066 LRCH3Q96II8 777 aa17.94■□□□□ 0.46
MRPL55-226ENST00000473066 PSTPIP2Q9H939 334 aa17.94■□□□□ 0.46
MRPL55-226ENST00000473066 EHMT1Q9H9B1 1298 aa17.94■□□□□ 0.46
MRPL55-226ENST00000473066 DDX41Q9UJV9 622 aaKnown RBP17.94■□□□□ 0.46
MRPL55-226ENST00000473066 BRPF3Q9ULD4 1205 aa17.94■□□□□ 0.46
MRPL55-226ENST00000473066 TANC1Q9C0D5 1861 aa17.94■□□□□ 0.46
MRPL55-226ENST00000473066 FRMPD4Q14CM0 1322 aa17.94■□□□□ 0.46
MRPL55-226ENST00000473066 SPDYE3A6NKU9 549 aa17.93■□□□□ 0.46
MRPL55-226ENST00000473066 hCG_1984214I3L0E3 225 aa17.93■□□□□ 0.46
MRPL55-226ENST00000473066 PIK3CDO00329 1044 aa17.93■□□□□ 0.46
MRPL55-226ENST00000473066 CD4P01730 458 aa17.93■□□□□ 0.46
MRPL55-226ENST00000473066 SUPT20HL2P0C7V6 817 aa17.93■□□□□ 0.46
MRPL55-226ENST00000473066 RPS6KB1P23443 525 aa17.93■□□□□ 0.46
MRPL55-226ENST00000473066 NAPAP54920 295 aa17.93■□□□□ 0.46
MRPL55-226ENST00000473066 APOBRQ0VD83 1088 aa17.93■□□□□ 0.46
MRPL55-226ENST00000473066 DGKDQ16760 1214 aa17.93■□□□□ 0.46
MRPL55-226ENST00000473066 MFSD5Q6N075 450 aa17.93■□□□□ 0.46
MRPL55-226ENST00000473066 PPP1R18Q6NYC8 613 aa17.93■□□□□ 0.46
MRPL55-226ENST00000473066 USP17L6PQ6QN14 398 aa17.93■□□□□ 0.46
MRPL55-226ENST00000473066 ZNF713Q8N859 430 aaPredicted RBP17.93■□□□□ 0.46
MRPL55-226ENST00000473066 GPKOWQ92917 476 aaPredicted RBP eCLIP17.93■□□□□ 0.46
MRPL55-226ENST00000473066 ALDH8A1Q9H2A2 487 aaPredicted RBP17.93■□□□□ 0.46
MRPL55-226ENST00000473066 HIPK3Q9H422 1215 aa17.93■□□□□ 0.46
MRPL55-226ENST00000473066 NOD1Q9Y239 953 aa17.93■□□□□ 0.46
MRPL55-226ENST00000473066 GRIN2DO15399 1336 aa17.93■□□□□ 0.46
MRPL55-226ENST00000473066 B4GALT4O60513 344 aa17.92■□□□□ 0.46
MRPL55-226ENST00000473066 GGPS1O95749 300 aa17.92■□□□□ 0.46
MRPL55-226ENST00000473066 TGFB3P10600 412 aa17.92■□□□□ 0.46
MRPL55-226ENST00000473066 ITGB8P26012 769 aa17.92■□□□□ 0.46
MRPL55-226ENST00000473066 NBPF20Q3BBV1 942 aa17.92■□□□□ 0.46
MRPL55-226ENST00000473066 XRRA1Q6P2D8 792 aa17.92■□□□□ 0.46
MRPL55-226ENST00000473066 NFRKBQ6P4R8 1299 aa17.92■□□□□ 0.46
MRPL55-226ENST00000473066 EMID1Q96A84 441 aaPredicted RBP17.92■□□□□ 0.46
MRPL55-226ENST00000473066 RNPC3Q96LT9 517 aaKnown RBP17.92■□□□□ 0.46
MRPL55-226ENST00000473066 KATNAL1Q9BW62 490 aa17.92■□□□□ 0.46
MRPL55-226ENST00000473066 TRPV6Q9H1D0 765 aa17.92■□□□□ 0.46
MRPL55-226ENST00000473066 KAT6AQ92794 2004 aa17.92■□□□□ 0.46
MRPL55-226ENST00000473066 TRIP12Q14669 1992 aaPredicted RBP17.91■□□□□ 0.46
MRPL55-226ENST00000473066 FIBPO43427 364 aa17.91■□□□□ 0.46
MRPL55-226ENST00000473066 UBA1P22314 1058 aaKnown RBP17.91■□□□□ 0.46
MRPL55-226ENST00000473066 PTPN11Q06124 597 aaPredicted RBP17.91■□□□□ 0.46
MRPL55-226ENST00000473066 SHHQ15465 462 aa17.91■□□□□ 0.46
MRPL55-226ENST00000473066 C9orf50Q5SZB4 431 aa17.91■□□□□ 0.46
MRPL55-226ENST00000473066 PCNX4Q63HM2 1172 aa17.91■□□□□ 0.46
MRPL55-226ENST00000473066 NLRX1Q86UT6 975 aa17.91■□□□□ 0.46
MRPL55-226ENST00000473066 PPTC7Q8NI37 304 aa17.91■□□□□ 0.46
MRPL55-226ENST00000473066 ZFP91Q96JP5 570 aaPredicted RBP17.91■□□□□ 0.46
MRPL55-226ENST00000473066 SPATA33Q96N06 139 aa17.91■□□□□ 0.46
MRPL55-226ENST00000473066 MLXIPQ9HAP2 919 aa17.91■□□□□ 0.46
MRPL55-226ENST00000473066 NOP56O00567 594 aaKnown RBP17.9■□□□□ 0.46
MRPL55-226ENST00000473066 MEIS2O14770 477 aa17.9■□□□□ 0.46
MRPL55-226ENST00000473066 SORBS3O60504 671 aa17.9■□□□□ 0.46
MRPL55-226ENST00000473066 EIF5BO60841 1220 aaKnown RBP17.9■□□□□ 0.46
MRPL55-226ENST00000473066 RGS20O76081 388 aa17.9■□□□□ 0.46
MRPL55-226ENST00000473066 CYP2C18P33260 490 aa17.9■□□□□ 0.46
MRPL55-226ENST00000473066 ADCY7P51828 1080 aa17.9■□□□□ 0.46
MRPL55-226ENST00000473066 AKAP17AQ02040 695 aaKnown RBP17.9■□□□□ 0.46
MRPL55-226ENST00000473066 UBE2SQ16763 222 aa17.9■□□□□ 0.46
MRPL55-226ENST00000473066 CELF3Q5SZQ8 465 aaKnown RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms