RNA–Protein interactions for RNA: ENST00000472756.1

VPS45-206, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 352 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-206ENST00000472756 DENND4BO75064 1496 aaPredicted RBP3.53□□□□□ -1.84
VPS45-206ENST00000472756 ABCC10Q5T3U5 1492 aa3.53□□□□□ -1.84
VPS45-206ENST00000472756 CCDC18Q5T9S5 1454 aa3.53□□□□□ -1.84
VPS45-206ENST00000472756 ABCC5O15440 1437 aa3.53□□□□□ -1.85
VPS45-206ENST00000472756 PTPRGP23470 1445 aa3.53□□□□□ -1.85
VPS45-206ENST00000472756 NAIPQ13075 1403 aa3.53□□□□□ -1.85
VPS45-206ENST00000472756 ROBO2Q9HCK4 1378 aa3.52□□□□□ -1.85
VPS45-206ENST00000472756 SHROOM2Q13796 1616 aa3.52□□□□□ -1.85
VPS45-206ENST00000472756 HECW1Q76N89 1606 aa3.52□□□□□ -1.85
VPS45-206ENST00000472756 RAPGEF6Q8TEU7 1601 aa3.52□□□□□ -1.85
VPS45-206ENST00000472756 NPEPPSL1A6NEC2 478 aa3.52□□□□□ -1.85
VPS45-206ENST00000472756 MEIS3P2A8K0S8 358 aa3.52□□□□□ -1.85
VPS45-206ENST00000472756 H0Y8X5 98 aa3.52□□□□□ -1.85
VPS45-206ENST00000472756 GREM1O60565 184 aa3.52□□□□□ -1.85
VPS45-206ENST00000472756 ZNF623O75123 536 aa3.52□□□□□ -1.85
VPS45-206ENST00000472756 NME1P15531 152 aaKnown RBP3.52□□□□□ -1.85
VPS45-206ENST00000472756 CHMP4BP1P59074 171 aa3.52□□□□□ -1.85
VPS45-206ENST00000472756 KRTAP10-9P60411 292 aa3.52□□□□□ -1.85
VPS45-206ENST00000472756 PPP2CBP62714 309 aa3.52□□□□□ -1.85
VPS45-206ENST00000472756 PPP2CAP67775 309 aa3.52□□□□□ -1.85
VPS45-206ENST00000472756 MLECQ14165 292 aa3.52□□□□□ -1.85
VPS45-206ENST00000472756 NLRC3Q7RTR2 1065 aa3.52□□□□□ -1.85
VPS45-206ENST00000472756 C7orf61Q8IZ16 206 aa3.52□□□□□ -1.85
VPS45-206ENST00000472756 TTLL6Q8N841 843 aa3.52□□□□□ -1.85
VPS45-206ENST00000472756 SLC6A18Q96N87 628 aa3.52□□□□□ -1.85
VPS45-206ENST00000472756 MEGF9Q9H1U4 602 aa3.52□□□□□ -1.85
VPS45-206ENST00000472756 PCDHB14Q9Y5E9 798 aa3.52□□□□□ -1.85
VPS45-206ENST00000472756 TROQ12816 1431 aaPredicted RBP3.52□□□□□ -1.85
VPS45-206ENST00000472756 CHD1O14646 1710 aa3.51□□□□□ -1.85
VPS45-206ENST00000472756 A0A1W2PQJ5 194 aa3.51□□□□□ -1.85
VPS45-206ENST00000472756 F6X3S4 739 aa3.51□□□□□ -1.85
VPS45-206ENST00000472756 DDX3XO00571 662 aaKnown RBP eCLIP3.51□□□□□ -1.85
VPS45-206ENST00000472756 PLSCR1O15162 318 aa3.51□□□□□ -1.85
VPS45-206ENST00000472756 ITGA1P56199 1179 aa3.51□□□□□ -1.85
VPS45-206ENST00000472756 PLEKHH3Q7Z736 793 aa3.51□□□□□ -1.85
VPS45-206ENST00000472756 GOLM1Q8NBJ4 401 aa3.51□□□□□ -1.85
VPS45-206ENST00000472756 VOPP1Q96AW1 172 aa3.51□□□□□ -1.85
VPS45-206ENST00000472756 YTHDC1Q96MU7 727 aaKnown RBP3.51□□□□□ -1.85
VPS45-206ENST00000472756 PTPN18Q99952 460 aa3.51□□□□□ -1.85
VPS45-206ENST00000472756 DEF6Q9H4E7 631 aa3.51□□□□□ -1.85
VPS45-206ENST00000472756 BRMS1Q9HCU9 246 aa3.51□□□□□ -1.85
VPS45-206ENST00000472756 RRP7BPQ9NSQ0 103 aa3.51□□□□□ -1.85
VPS45-206ENST00000472756 FBXL21Q9UKT6 434 aa3.51□□□□□ -1.85
VPS45-206ENST00000472756 HFM1A2PYH4 1435 aa3.51□□□□□ -1.85
VPS45-206ENST00000472756 MIA2Q96PC5 1412 aa3.51□□□□□ -1.85
VPS45-206ENST00000472756 UACAQ9BZF9 1416 aa3.51□□□□□ -1.85
VPS45-206ENST00000472756 KDM6BO15054 1643 aa3.51□□□□□ -1.85
VPS45-206ENST00000472756 PTPN23Q9H3S7 1636 aa3.51□□□□□ -1.85
VPS45-206ENST00000472756 SUPT6HQ7KZ85 1726 aaKnown RBP3.5□□□□□ -1.85
VPS45-206ENST00000472756 CLSPNQ9HAW4 1339 aa3.5□□□□□ -1.85
VPS45-206ENST00000472756 C9IYK1 514 aa3.5□□□□□ -1.85
VPS45-206ENST00000472756 PATL2C9JE40 543 aaKnown RBP3.5□□□□□ -1.85
VPS45-206ENST00000472756 BRD1O95696 1058 aa3.5□□□□□ -1.85
VPS45-206ENST00000472756 TBC1D8O95759 1140 aa3.5□□□□□ -1.85
VPS45-206ENST00000472756 ZNF445P59923 1031 aa3.5□□□□□ -1.85
VPS45-206ENST00000472756 SLFN13Q68D06 897 aa3.5□□□□□ -1.85
VPS45-206ENST00000472756 RNF207Q6ZRF8 634 aa3.5□□□□□ -1.85
VPS45-206ENST00000472756 FAM26EQ8N5C1 309 aa3.5□□□□□ -1.85
VPS45-206ENST00000472756 DUSP9Q99956 384 aaKnown RBP3.5□□□□□ -1.85
VPS45-206ENST00000472756 MKRN2Q9H000 416 aaKnown RBP3.5□□□□□ -1.85
VPS45-206ENST00000472756 TCAF1Q9Y4C2 921 aa3.5□□□□□ -1.85
VPS45-206ENST00000472756 KIF14Q15058 1648 aa3.5□□□□□ -1.85
VPS45-206ENST00000472756 PLEKHD1A6NEE1 506 aa3.49□□□□□ -1.85
VPS45-206ENST00000472756 IFNGR1P15260 489 aa3.49□□□□□ -1.85
VPS45-206ENST00000472756 NOP2P46087 812 aaKnown RBP3.49□□□□□ -1.85
VPS45-206ENST00000472756 FAM160A1Q05DH4 1040 aa3.49□□□□□ -1.85
VPS45-206ENST00000472756 ADAM9Q13443 819 aa3.49□□□□□ -1.85
VPS45-206ENST00000472756 RCSD1Q6JBY9 416 aa3.49□□□□□ -1.85
VPS45-206ENST00000472756 FBXL19Q6PCT2 694 aa3.49□□□□□ -1.85
VPS45-206ENST00000472756 LZTR1Q8N653 840 aa3.49□□□□□ -1.85
VPS45-206ENST00000472756 USP33Q8TEY7 942 aa3.49□□□□□ -1.85
VPS45-206ENST00000472756 NAF1Q96HR8 494 aaKnown RBP3.49□□□□□ -1.85
VPS45-206ENST00000472756 SLC9A7Q96T83 725 aa3.49□□□□□ -1.85
VPS45-206ENST00000472756 SUCOQ9UBS9 1254 aaKnown RBP3.49□□□□□ -1.85
VPS45-206ENST00000472756 NUDT5Q9UKK9 219 aa3.49□□□□□ -1.85
VPS45-206ENST00000472756 ZFR2Q9UPR6 939 aaKnown RBP3.49□□□□□ -1.85
VPS45-206ENST00000472756 DAPK1P53355 1430 aa3.49□□□□□ -1.85
VPS45-206ENST00000472756 AKNAQ7Z591 1439 aa3.49□□□□□ -1.85
VPS45-206ENST00000472756 KDM5BQ9UGL1 1544 aa3.49□□□□□ -1.85
VPS45-206ENST00000472756 MBD5Q9P267 1494 aa3.48□□□□□ -1.85
VPS45-206ENST00000472756 GBP2P32456 591 aaPredicted RBP3.48□□□□□ -1.85
VPS45-206ENST00000472756 HNRNPMP52272 730 aaKnown RBP eCLIP3.48□□□□□ -1.85
VPS45-206ENST00000472756 ABHD18Q0P651 414 aa3.48□□□□□ -1.85
VPS45-206ENST00000472756 CWF19L2Q2TBE0 894 aaKnown RBP3.48□□□□□ -1.85
VPS45-206ENST00000472756 INTS3Q68E01 1043 aaKnown RBP3.48□□□□□ -1.85
VPS45-206ENST00000472756 CWF19L1Q69YN2 538 aaKnown RBP3.48□□□□□ -1.85
VPS45-206ENST00000472756 WWC2Q6AWC2 1192 aa3.48□□□□□ -1.85
VPS45-206ENST00000472756 ETV3LQ6ZN32 361 aa3.48□□□□□ -1.85
VPS45-206ENST00000472756 SCUBE1Q8IWY4 988 aa3.48□□□□□ -1.85
VPS45-206ENST00000472756 REXO1Q8N1G1 1221 aaKnown RBP3.48□□□□□ -1.85
VPS45-206ENST00000472756 MCMBPQ9BTE3 642 aa3.48□□□□□ -1.85
VPS45-206ENST00000472756 TRIM8Q9BZR9 551 aa3.48□□□□□ -1.85
VPS45-206ENST00000472756 CFDP1Q9UEE9 299 aaPredicted RBP3.48□□□□□ -1.85
VPS45-206ENST00000472756 CDK11AQ9UQ88 783 aaPredicted RBP3.48□□□□□ -1.85
VPS45-206ENST00000472756 FHOD1Q9Y613 1164 aa3.48□□□□□ -1.85
VPS45-206ENST00000472756 ABCC2Q92887 1545 aa3.48□□□□□ -1.85
VPS45-206ENST00000472756 ARHGEF12Q9NZN5 1544 aa3.48□□□□□ -1.85
VPS45-206ENST00000472756 ADCY10Q96PN6 1610 aa3.48□□□□□ -1.85
VPS45-206ENST00000472756 UHRF1BP1LA0JNW5 1464 aa3.47□□□□□ -1.85
VPS45-206ENST00000472756 CAMSAP2Q08AD1 1489 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms