RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 NOD1Q9Y239 953 aa22.41■■□□□ 1.18
COMMD1-208ENST00000472729 ALPK3Q96L96 1907 aa22.4■■□□□ 1.18
COMMD1-208ENST00000472729 ARIH2O95376 493 aa22.4■■□□□ 1.18
COMMD1-208ENST00000472729 EXOSC10Q01780 885 aaKnown RBP22.4■■□□□ 1.18
COMMD1-208ENST00000472729 SHHQ15465 462 aa22.4■■□□□ 1.18
COMMD1-208ENST00000472729 DGKDQ16760 1214 aa22.4■■□□□ 1.18
COMMD1-208ENST00000472729 RTN1Q16799 776 aa22.4■■□□□ 1.18
COMMD1-208ENST00000472729 ADCK5Q3MIX3 580 aa22.4■■□□□ 1.18
COMMD1-208ENST00000472729 MFSD5Q6N075 450 aa22.4■■□□□ 1.18
COMMD1-208ENST00000472729 GPR153Q6NV75 609 aa22.4■■□□□ 1.18
COMMD1-208ENST00000472729 CCDC62Q6P9F0 684 aa22.4■■□□□ 1.18
COMMD1-208ENST00000472729 APOA5Q6Q788 366 aa22.4■■□□□ 1.18
COMMD1-208ENST00000472729 BLOC1S2Q6QNY1 142 aa22.4■■□□□ 1.18
COMMD1-208ENST00000472729 TMTC3Q6ZXV5 915 aa22.4■■□□□ 1.18
COMMD1-208ENST00000472729 HEATR3Q7Z4Q2 680 aa22.4■■□□□ 1.18
COMMD1-208ENST00000472729 VSIG10LQ86VR7 867 aa22.4■■□□□ 1.18
COMMD1-208ENST00000472729 SLC43A3Q8NBI5 491 aa22.4■■□□□ 1.18
COMMD1-208ENST00000472729 AFG1LQ8WV93 481 aa22.4■■□□□ 1.18
COMMD1-208ENST00000472729 HIPK3Q9H422 1215 aa22.4■■□□□ 1.18
COMMD1-208ENST00000472729 DDX41Q9UJV9 622 aaKnown RBP22.4■■□□□ 1.18
COMMD1-208ENST00000472729 RANBP2P49792 3224 aaKnown RBP22.39■■□□□ 1.18
COMMD1-208ENST00000472729 KLF18A0A0U1RQI7 1052 aa22.39■■□□□ 1.17
COMMD1-208ENST00000472729 CCDC196A0A1B0GTZ2 297 aa22.39■■□□□ 1.17
COMMD1-208ENST00000472729 STAM2O75886 525 aa22.39■■□□□ 1.17
COMMD1-208ENST00000472729 ITGB8P26012 769 aa22.39■■□□□ 1.17
COMMD1-208ENST00000472729 HSPA4P34932 840 aa22.39■■□□□ 1.17
COMMD1-208ENST00000472729 RNPC3Q96LT9 517 aaKnown RBP22.39■■□□□ 1.17
COMMD1-208ENST00000472729 TRPV6Q9H1D0 765 aa22.39■■□□□ 1.17
COMMD1-208ENST00000472729 ALDH8A1Q9H2A2 487 aaPredicted RBP22.39■■□□□ 1.17
COMMD1-208ENST00000472729 MLXIPQ9HAP2 919 aa22.39■■□□□ 1.17
COMMD1-208ENST00000472729 GOLGA8AA7E2F4 631 aa22.38■■□□□ 1.17
COMMD1-208ENST00000472729 GOLGA8BA8MQT2 603 aa22.38■■□□□ 1.17
COMMD1-208ENST00000472729 TGFB3P10600 412 aa22.38■■□□□ 1.17
COMMD1-208ENST00000472729 hCG_1642624A0A1W2PR95 340 aa22.37■■□□□ 1.17
COMMD1-208ENST00000472729 SPDYE3A6NKU9 549 aa22.37■■□□□ 1.17
COMMD1-208ENST00000472729 B4GALT4O60513 344 aa22.37■■□□□ 1.17
COMMD1-208ENST00000472729 CD4P01730 458 aa22.37■■□□□ 1.17
COMMD1-208ENST00000472729 MMP3P08254 477 aa22.37■■□□□ 1.17
COMMD1-208ENST00000472729 NBPF20Q3BBV1 942 aa22.37■■□□□ 1.17
COMMD1-208ENST00000472729 NFRKBQ6P4R8 1299 aa22.37■■□□□ 1.17
COMMD1-208ENST00000472729 USP17L6PQ6QN14 398 aa22.37■■□□□ 1.17
COMMD1-208ENST00000472729 KATNAL1Q9BW62 490 aa22.37■■□□□ 1.17
COMMD1-208ENST00000472729 EHMT1Q9H9B1 1298 aa22.37■■□□□ 1.17
COMMD1-208ENST00000472729 PIK3CDO00329 1044 aa22.36■■□□□ 1.17
COMMD1-208ENST00000472729 ARHGAP1Q07960 439 aa22.36■■□□□ 1.17
COMMD1-208ENST00000472729 COL9A3Q14050 684 aaPredicted RBP22.36■■□□□ 1.17
COMMD1-208ENST00000472729 C9orf50Q5SZB4 431 aa22.36■■□□□ 1.17
COMMD1-208ENST00000472729 XRRA1Q6P2D8 792 aa22.36■■□□□ 1.17
COMMD1-208ENST00000472729 DEFB123Q8N688 67 aa22.36■■□□□ 1.17
COMMD1-208ENST00000472729 PPTC7Q8NI37 304 aa22.36■■□□□ 1.17
COMMD1-208ENST00000472729 SPATA33Q96N06 139 aa22.36■■□□□ 1.17
COMMD1-208ENST00000472729 MTIF3Q9H2K0 278 aaKnown RBP22.36■■□□□ 1.17
COMMD1-208ENST00000472729 SNX14Q9Y5W7 946 aa22.36■■□□□ 1.17
COMMD1-208ENST00000472729 GRIN2DO15399 1336 aa22.35■■□□□ 1.17
COMMD1-208ENST00000472729 NOP56O00567 594 aaKnown RBP22.35■■□□□ 1.17
COMMD1-208ENST00000472729 CSF2RAP15509 400 aa22.35■■□□□ 1.17
COMMD1-208ENST00000472729 CYP2C18P33260 490 aa22.35■■□□□ 1.17
COMMD1-208ENST00000472729 METAP2P50579 478 aaKnown RBP eCLIP22.35■■□□□ 1.17
COMMD1-208ENST00000472729 RCAN1P53805 252 aa22.35■■□□□ 1.17
COMMD1-208ENST00000472729 PTPN11Q06124 597 aaPredicted RBP22.35■■□□□ 1.17
COMMD1-208ENST00000472729 Q6ZUG5 572 aa22.35■■□□□ 1.17
COMMD1-208ENST00000472729 NLRX1Q86UT6 975 aa22.35■■□□□ 1.17
COMMD1-208ENST00000472729 C7orf31Q8N865 590 aa22.35■■□□□ 1.17
COMMD1-208ENST00000472729 RETREG2Q8NC44 543 aa22.35■■□□□ 1.17
COMMD1-208ENST00000472729 EMID1Q96A84 441 aaPredicted RBP22.35■■□□□ 1.17
COMMD1-208ENST00000472729 TRMT13Q9NUP7 481 aaKnown RBP22.35■■□□□ 1.17
COMMD1-208ENST00000472729 RTEL1Q9NZ71 1219 aa22.35■■□□□ 1.17
COMMD1-208ENST00000472729 BRPF3Q9ULD4 1205 aa22.35■■□□□ 1.17
COMMD1-208ENST00000472729 V9GY48 417 aaPredicted RBP22.35■■□□□ 1.17
COMMD1-208ENST00000472729 MCM3APO60318 1980 aa22.34■■□□□ 1.17
COMMD1-208ENST00000472729 EPB41L2O43491 1005 aaKnown RBP22.34■■□□□ 1.17
COMMD1-208ENST00000472729 GGPS1O95749 300 aa22.34■■□□□ 1.17
COMMD1-208ENST00000472729 NAPAP54920 295 aa22.34■■□□□ 1.17
COMMD1-208ENST00000472729 NEDD9Q14511 834 aa22.34■■□□□ 1.17
COMMD1-208ENST00000472729 CELF3Q5SZQ8 465 aaKnown RBP22.34■■□□□ 1.17
COMMD1-208ENST00000472729 PSRC1Q6PGN9 363 aaPredicted RBP22.34■■□□□ 1.17
COMMD1-208ENST00000472729 RPUSD2Q8IZ73 545 aaKnown RBP22.34■■□□□ 1.17
COMMD1-208ENST00000472729 IL31RAQ8NI17 732 aa22.34■■□□□ 1.17
COMMD1-208ENST00000472729 BRF1Q92994 677 aa22.34■■□□□ 1.17
COMMD1-208ENST00000472729 ZFP91Q96JP5 570 aaPredicted RBP22.34■■□□□ 1.17
COMMD1-208ENST00000472729 SORBS3O60504 671 aa22.33■■□□□ 1.17
COMMD1-208ENST00000472729 PPFIA4O75335 1185 aa22.33■■□□□ 1.17
COMMD1-208ENST00000472729 CCL23P55773 120 aa22.33■■□□□ 1.17
COMMD1-208ENST00000472729 AKAP17AQ02040 695 aaKnown RBP22.33■■□□□ 1.17
COMMD1-208ENST00000472729 PCNX4Q63HM2 1172 aa22.33■■□□□ 1.17
COMMD1-208ENST00000472729 KCNB2Q92953 911 aa22.33■■□□□ 1.17
COMMD1-208ENST00000472729 hCG_1984214I3L0E3 225 aa22.32■■□□□ 1.16
COMMD1-208ENST00000472729 MEIS2O14770 477 aa22.32■■□□□ 1.16
COMMD1-208ENST00000472729 FIBPO43427 364 aa22.32■■□□□ 1.16
COMMD1-208ENST00000472729 CPA1P15085 419 aa22.32■■□□□ 1.16
COMMD1-208ENST00000472729 RPS6KB1P23443 525 aa22.32■■□□□ 1.16
COMMD1-208ENST00000472729 APOBRQ0VD83 1088 aa22.32■■□□□ 1.16
COMMD1-208ENST00000472729 BFSP2Q13515 415 aa22.32■■□□□ 1.16
COMMD1-208ENST00000472729 MYSM1Q5VVJ2 828 aa22.32■■□□□ 1.16
COMMD1-208ENST00000472729 CCDC155Q8N6L0 562 aa22.32■■□□□ 1.16
COMMD1-208ENST00000472729 ZNF713Q8N859 430 aaPredicted RBP22.32■■□□□ 1.16
COMMD1-208ENST00000472729 GPKOWQ92917 476 aaPredicted RBP eCLIP22.32■■□□□ 1.16
COMMD1-208ENST00000472729 CDHR1Q96JP9 859 aa22.32■■□□□ 1.16
COMMD1-208ENST00000472729 GLT8D2Q9H1C3 349 aa22.32■■□□□ 1.16
COMMD1-208ENST00000472729 DNAH12Q6ZR08 3092 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms