RNA–Protein interactions for RNA: ENST00000472673.5

COMMD3-211, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 237 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-211ENST00000472673 SPATC1Q76KD6 591 aa5.88□□□□□ -1.47
COMMD3-211ENST00000472673 AMIGO3Q86WK7 504 aa5.88□□□□□ -1.47
COMMD3-211ENST00000472673 DACT3Q96B18 629 aaPredicted RBP5.88□□□□□ -1.47
COMMD3-211ENST00000472673 ARMC5Q96C12 935 aa5.88□□□□□ -1.47
COMMD3-211ENST00000472673 PWWP2AQ96N64 755 aa5.88□□□□□ -1.47
COMMD3-211ENST00000472673 RNF38Q9H0F5 515 aa5.88□□□□□ -1.47
COMMD3-211ENST00000472673 SIRPGQ9P1W8 387 aa5.88□□□□□ -1.47
COMMD3-211ENST00000472673 PFDN2Q9UHV9 154 aa5.88□□□□□ -1.47
COMMD3-211ENST00000472673 TRAV20A0A0B4J274 112 aa5.87□□□□□ -1.47
COMMD3-211ENST00000472673 FGFR1P11362 822 aa5.87□□□□□ -1.47
COMMD3-211ENST00000472673 PABPC1P11940 636 aaKnown RBP5.87□□□□□ -1.47
COMMD3-211ENST00000472673 MC3RP41968 323 aa5.87□□□□□ -1.47
COMMD3-211ENST00000472673 LSAMPQ13449 338 aa5.87□□□□□ -1.47
COMMD3-211ENST00000472673 SF3A1Q15459 793 aaKnown RBP5.87□□□□□ -1.47
COMMD3-211ENST00000472673 MTERF2Q49AM1 385 aa5.87□□□□□ -1.47
COMMD3-211ENST00000472673 YOD1Q5VVQ6 348 aaPredicted RBP5.87□□□□□ -1.47
COMMD3-211ENST00000472673 NSMFQ6X4W1 530 aa5.87□□□□□ -1.47
COMMD3-211ENST00000472673 SEC14L1Q92503 715 aa5.87□□□□□ -1.47
COMMD3-211ENST00000472673 ZNF669Q96BR6 464 aaPredicted RBP5.87□□□□□ -1.47
COMMD3-211ENST00000472673 SPATA9Q9BWV2 254 aa5.87□□□□□ -1.47
COMMD3-211ENST00000472673 CCDC113Q9H0I3 377 aa5.87□□□□□ -1.47
COMMD3-211ENST00000472673 CLDND1Q9NY35 253 aa5.87□□□□□ -1.47
COMMD3-211ENST00000472673 COA3Q9Y2R0 106 aaPredicted RBP5.87□□□□□ -1.47
COMMD3-211ENST00000472673 NPFFR2Q9Y5X5 522 aa5.87□□□□□ -1.47
COMMD3-211ENST00000472673 SGSM2O43147 1006 aa5.86□□□□□ -1.47
COMMD3-211ENST00000472673 FOXO4P98177 505 aa5.86□□□□□ -1.47
COMMD3-211ENST00000472673 SSRP1Q08945 709 aaKnown RBP5.86□□□□□ -1.47
COMMD3-211ENST00000472673 IFRD2Q12894 506 aaPredicted RBP5.86□□□□□ -1.47
COMMD3-211ENST00000472673 RASGRF1Q13972 1273 aa5.86□□□□□ -1.47
COMMD3-211ENST00000472673 VMACQ2NL98 169 aa5.86□□□□□ -1.47
COMMD3-211ENST00000472673 FBLN7Q53RD9 439 aa5.86□□□□□ -1.47
COMMD3-211ENST00000472673 RIOX2Q8IUF8 465 aa5.86□□□□□ -1.47
COMMD3-211ENST00000472673 Q8N1Y9 231 aa5.86□□□□□ -1.47
COMMD3-211ENST00000472673 NLGN1Q8N2Q7 840 aa5.86□□□□□ -1.47
COMMD3-211ENST00000472673 OSBP2Q969R2 916 aa5.86□□□□□ -1.47
COMMD3-211ENST00000472673 PHF20Q9BVI0 1012 aa5.86□□□□□ -1.47
COMMD3-211ENST00000472673 X6R8D5 127 aa5.86□□□□□ -1.47
COMMD3-211ENST00000472673 BLACEA4D250 179 aa5.85□□□□□ -1.47
COMMD3-211ENST00000472673 H7BY64 318 aa5.85□□□□□ -1.47
COMMD3-211ENST00000472673 SLC6A11P48066 632 aa5.85□□□□□ -1.47
COMMD3-211ENST00000472673 RBL2Q08999 1139 aa5.85□□□□□ -1.47
COMMD3-211ENST00000472673 MILR1Q7Z6M3 343 aa5.85□□□□□ -1.47
COMMD3-211ENST00000472673 PMFBP1Q8TBY8 1022 aa5.85□□□□□ -1.47
COMMD3-211ENST00000472673 GPR27Q9NS67 375 aa5.85□□□□□ -1.47
COMMD3-211ENST00000472673 PALD1Q9ULE6 856 aa5.85□□□□□ -1.47
COMMD3-211ENST00000472673 DIAPH1O60610 1272 aaKnown RBP5.84□□□□□ -1.47
COMMD3-211ENST00000472673 MSCO60682 206 aa5.84□□□□□ -1.47
COMMD3-211ENST00000472673 BMP7P18075 431 aa5.84□□□□□ -1.47
COMMD3-211ENST00000472673 CACNB2Q08289 660 aaPredicted RBP5.84□□□□□ -1.47
COMMD3-211ENST00000472673 SERINC3Q13530 473 aa5.84□□□□□ -1.47
COMMD3-211ENST00000472673 NTRK3Q16288 839 aa5.84□□□□□ -1.47
COMMD3-211ENST00000472673 KCNT2Q6UVM3 1135 aa5.84□□□□□ -1.47
COMMD3-211ENST00000472673 B3GNT8Q7Z7M8 397 aa5.84□□□□□ -1.47
COMMD3-211ENST00000472673 SMARCC2Q8TAQ2 1214 aa5.84□□□□□ -1.47
COMMD3-211ENST00000472673 DCAF4Q8WV16 495 aa5.84□□□□□ -1.47
COMMD3-211ENST00000472673 CPA5Q8WXQ8 436 aa5.84□□□□□ -1.47
COMMD3-211ENST00000472673 DEPDC7Q96QD5 511 aa5.84□□□□□ -1.47
COMMD3-211ENST00000472673 CDC6Q99741 560 aa5.84□□□□□ -1.47
COMMD3-211ENST00000472673 PMF1-BGLAPU3KQ54 211 aa5.84□□□□□ -1.47
COMMD3-211ENST00000472673 FAM221BA6H8Z2 402 aa5.83□□□□□ -1.48
COMMD3-211ENST00000472673 ADCY3O60266 1144 aa5.83□□□□□ -1.48
COMMD3-211ENST00000472673 DGKIO75912 1065 aa5.83□□□□□ -1.48
COMMD3-211ENST00000472673 PLA2G1BP04054 148 aaKnown RBP5.83□□□□□ -1.48
COMMD3-211ENST00000472673 RASA3Q14644 834 aa5.83□□□□□ -1.48
COMMD3-211ENST00000472673 CHRNA2Q15822 529 aa5.83□□□□□ -1.48
COMMD3-211ENST00000472673 RSPO2Q6UXX9 243 aaPredicted RBP5.83□□□□□ -1.48
COMMD3-211ENST00000472673 ETV3LQ6ZN32 361 aa5.83□□□□□ -1.48
COMMD3-211ENST00000472673 FNIP1Q8TF40 1166 aa5.83□□□□□ -1.48
COMMD3-211ENST00000472673 EPB41L1Q9H4G0 881 aa5.83□□□□□ -1.48
COMMD3-211ENST00000472673 PPARGC1AQ9UBK2 798 aaKnown RBP5.83□□□□□ -1.48
COMMD3-211ENST00000472673 KDM2BQ8NHM5 1336 aa5.82□□□□□ -1.48
COMMD3-211ENST00000472673 HGSO14964 777 aaPredicted RBP5.82□□□□□ -1.48
COMMD3-211ENST00000472673 TRIM13O60858 407 aa5.82□□□□□ -1.48
COMMD3-211ENST00000472673 C8BP07358 591 aa5.82□□□□□ -1.48
COMMD3-211ENST00000472673 CYP2C8P10632 490 aa5.82□□□□□ -1.48
COMMD3-211ENST00000472673 SOGA3Q5TF21 947 aa5.82□□□□□ -1.48
COMMD3-211ENST00000472673 STEAP3Q658P3 488 aa5.82□□□□□ -1.48
COMMD3-211ENST00000472673 SCUBE1Q8IWY4 988 aa5.82□□□□□ -1.48
COMMD3-211ENST00000472673 ZBTB38Q8NAP3 1195 aaPredicted RBP5.82□□□□□ -1.48
COMMD3-211ENST00000472673 SREK1Q8WXA9 508 aaKnown RBP5.82□□□□□ -1.48
COMMD3-211ENST00000472673 DDX11Q96FC9 970 aa5.82□□□□□ -1.48
COMMD3-211ENST00000472673 IPO9Q96P70 1041 aaKnown RBP5.82□□□□□ -1.48
COMMD3-211ENST00000472673 NOX5Q96PH1 765 aa5.82□□□□□ -1.48
COMMD3-211ENST00000472673 SRPK1Q96SB4 655 aaKnown RBP5.82□□□□□ -1.48
COMMD3-211ENST00000472673 DNAJC2Q99543 621 aaKnown RBP5.82□□□□□ -1.48
COMMD3-211ENST00000472673 YIPF4Q9BSR8 244 aa5.82□□□□□ -1.48
COMMD3-211ENST00000472673 JAM3Q9BX67 310 aa5.82□□□□□ -1.48
COMMD3-211ENST00000472673 ZCCHC4Q9H5U6 513 aa5.82□□□□□ -1.48
COMMD3-211ENST00000472673 SNTG2Q9NY99 539 aa5.82□□□□□ -1.48
COMMD3-211ENST00000472673 ADAMTS20P59510 1910 aa5.82□□□□□ -1.48
COMMD3-211ENST00000472673 TRBV23-1A0A0A0MS06 115 aa5.81□□□□□ -1.48
COMMD3-211ENST00000472673 INHBBP09529 407 aa5.81□□□□□ -1.48
COMMD3-211ENST00000472673 FAM153BP0C7A2 387 aa5.81□□□□□ -1.48
COMMD3-211ENST00000472673 HTRA3P83110 453 aa5.81□□□□□ -1.48
COMMD3-211ENST00000472673 KIZQ2M2Z5 673 aa5.81□□□□□ -1.48
COMMD3-211ENST00000472673 FAM209AQ5JX71 171 aa5.81□□□□□ -1.48
COMMD3-211ENST00000472673 STYK1Q6J9G0 422 aa5.81□□□□□ -1.48
COMMD3-211ENST00000472673 CD300LDQ6UXZ3 194 aa5.81□□□□□ -1.48
COMMD3-211ENST00000472673 LBX2Q6XYB7 198 aa5.81□□□□□ -1.48
COMMD3-211ENST00000472673 DPH6Q7L8W6 267 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms