RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 PLBD2Q8NHP8 589 aa4.49□□□□□ -1.69
XRN1-209ENST00000472625 XAGE3Q8WTP9 111 aa4.49□□□□□ -1.69
XRN1-209ENST00000472625 KCNB2Q92953 911 aa4.49□□□□□ -1.69
XRN1-209ENST00000472625 ISL2Q96A47 359 aa4.49□□□□□ -1.69
XRN1-209ENST00000472625 METTL22Q9BUU2 404 aaPredicted RBP4.49□□□□□ -1.69
XRN1-209ENST00000472625 KRTAP4-2Q9BYR5 136 aa4.49□□□□□ -1.69
XRN1-209ENST00000472625 CEP44Q9C0F1 390 aa4.49□□□□□ -1.69
XRN1-209ENST00000472625 ZNF408Q9H9D4 720 aa4.49□□□□□ -1.69
XRN1-209ENST00000472625 GBA2Q9HCG7 927 aaPredicted RBP4.49□□□□□ -1.69
XRN1-209ENST00000472625 PPP4R2Q9NY27 417 aa4.49□□□□□ -1.69
XRN1-209ENST00000472625 MIS18AQ9NYP9 233 aa4.49□□□□□ -1.69
XRN1-209ENST00000472625 CNOT7Q9UIV1 285 aaKnown RBP4.49□□□□□ -1.69
XRN1-209ENST00000472625 RNF114Q9Y508 228 aa4.49□□□□□ -1.69
XRN1-209ENST00000472625 CACNA1SQ13698 1873 aa4.49□□□□□ -1.69
XRN1-209ENST00000472625 CCDC88AQ3V6T2 1871 aa4.49□□□□□ -1.69
XRN1-209ENST00000472625 DDX60Q8IY21 1712 aaKnown RBP4.49□□□□□ -1.69
XRN1-209ENST00000472625 GFRA2O00451 464 aa4.48□□□□□ -1.69
XRN1-209ENST00000472625 TRAF5O00463 557 aa4.48□□□□□ -1.69
XRN1-209ENST00000472625 ECE2O60344 883 aa4.48□□□□□ -1.69
XRN1-209ENST00000472625 RAD17O75943 681 aa4.48□□□□□ -1.69
XRN1-209ENST00000472625 TFE3P19532 575 aaPredicted RBP4.48□□□□□ -1.69
XRN1-209ENST00000472625 GARTP22102 1010 aa4.48□□□□□ -1.69
XRN1-209ENST00000472625 SREBF2Q12772 1141 aa4.48□□□□□ -1.69
XRN1-209ENST00000472625 HP1BP3Q5SSJ5 553 aaPredicted RBP4.48□□□□□ -1.69
XRN1-209ENST00000472625 SCARA3Q6AZY7 606 aa4.48□□□□□ -1.69
XRN1-209ENST00000472625 TTBK2Q6IQ55 1244 aa4.48□□□□□ -1.69
XRN1-209ENST00000472625 LLGL2Q6P1M3 1020 aa4.48□□□□□ -1.69
XRN1-209ENST00000472625 AGMOQ6ZNB7 445 aa4.48□□□□□ -1.69
XRN1-209ENST00000472625 CYFIP1Q7L576 1253 aa4.48□□□□□ -1.69
XRN1-209ENST00000472625 COPS6Q7L5N1 327 aa4.48□□□□□ -1.69
XRN1-209ENST00000472625 LRP10Q7Z4F1 713 aa4.48□□□□□ -1.69
XRN1-209ENST00000472625 VSIG10LQ86VR7 867 aa4.48□□□□□ -1.69
XRN1-209ENST00000472625 FAM181AQ8N9Y4 354 aa4.48□□□□□ -1.69
XRN1-209ENST00000472625 ZBTB38Q8NAP3 1195 aaPredicted RBP4.48□□□□□ -1.69
XRN1-209ENST00000472625 RNF214Q8ND24 703 aa4.48□□□□□ -1.69
XRN1-209ENST00000472625 RHOVQ96L33 236 aa4.48□□□□□ -1.69
XRN1-209ENST00000472625 CDC5LQ99459 802 aaKnown RBP4.48□□□□□ -1.69
XRN1-209ENST00000472625 GLIS2Q9BZE0 524 aaPredicted RBP4.48□□□□□ -1.69
XRN1-209ENST00000472625 MCOLN1Q9GZU1 580 aa4.48□□□□□ -1.69
XRN1-209ENST00000472625 PODXL2Q9NZ53 605 aa4.48□□□□□ -1.69
XRN1-209ENST00000472625 TLR6Q9Y2C9 796 aa4.48□□□□□ -1.69
XRN1-209ENST00000472625 LRRC37AA6NMS7 1700 aa4.48□□□□□ -1.69
XRN1-209ENST00000472625 LTBP1Q14766 1721 aa4.48□□□□□ -1.69
XRN1-209ENST00000472625 COL1A1P02452 1464 aaPredicted RBP4.48□□□□□ -1.69
XRN1-209ENST00000472625 COL4A5P29400 1685 aa4.48□□□□□ -1.69
XRN1-209ENST00000472625 XDHP47989 1333 aa4.47□□□□□ -1.69
XRN1-209ENST00000472625 UNCXA6NJT0 531 aa4.47□□□□□ -1.69
XRN1-209ENST00000472625 DCDC2CA8MYV0 355 aa4.47□□□□□ -1.69
XRN1-209ENST00000472625 PSMD14O00487 310 aa4.47□□□□□ -1.69
XRN1-209ENST00000472625 CHL1O00533 1208 aa4.47□□□□□ -1.69
XRN1-209ENST00000472625 IRS4O14654 1257 aaPredicted RBP4.47□□□□□ -1.69
XRN1-209ENST00000472625 UFL1O94874 794 aa4.47□□□□□ -1.69
XRN1-209ENST00000472625 FAM87AP0C7U9 286 aa4.47□□□□□ -1.69
XRN1-209ENST00000472625 HCLS1P14317 486 aaPredicted RBP4.47□□□□□ -1.69
XRN1-209ENST00000472625 ZNF16P17020 682 aaPredicted RBP4.47□□□□□ -1.69
XRN1-209ENST00000472625 TMPOP42166 694 aaKnown RBP4.47□□□□□ -1.69
XRN1-209ENST00000472625 LIG3P49916 1009 aa4.47□□□□□ -1.69
XRN1-209ENST00000472625 RPS8P62241 208 aaKnown RBP4.47□□□□□ -1.69
XRN1-209ENST00000472625 RPS26P62854 115 aaKnown RBP4.47□□□□□ -1.69
XRN1-209ENST00000472625 GNAI1P63096 354 aa4.47□□□□□ -1.69
XRN1-209ENST00000472625 NEXNQ0ZGT2 675 aa4.47□□□□□ -1.69
XRN1-209ENST00000472625 AIMP1Q12904 312 aaKnown RBP4.47□□□□□ -1.69
XRN1-209ENST00000472625 PPM1JQ5JR12 505 aa4.47□□□□□ -1.69
XRN1-209ENST00000472625 ZBTB37Q5TC79 503 aa4.47□□□□□ -1.69
XRN1-209ENST00000472625 DUSP27Q5VZP5 1158 aa4.47□□□□□ -1.69
XRN1-209ENST00000472625 CTU1Q7Z7A3 348 aaKnown RBP4.47□□□□□ -1.69
XRN1-209ENST00000472625 HOMEZQ8IX15 550 aa4.47□□□□□ -1.69
XRN1-209ENST00000472625 CCDC191Q8NCU4 936 aa4.47□□□□□ -1.69
XRN1-209ENST00000472625 PHC3Q8NDX5 983 aa4.47□□□□□ -1.69
XRN1-209ENST00000472625 RUNDC1Q96C34 613 aa4.47□□□□□ -1.69
XRN1-209ENST00000472625 GCC1Q96CN9 775 aa4.47□□□□□ -1.69
XRN1-209ENST00000472625 CRELD1Q96HD1 420 aa4.47□□□□□ -1.69
XRN1-209ENST00000472625 THUMPD2Q9BTF0 503 aaKnown RBP4.47□□□□□ -1.69
XRN1-209ENST00000472625 NOC4LQ9BVI4 516 aaKnown RBP4.47□□□□□ -1.69
XRN1-209ENST00000472625 EMILIN2Q9BXX0 1053 aa4.47□□□□□ -1.69
XRN1-209ENST00000472625 FBRSQ9HAH7 460 aa4.47□□□□□ -1.69
XRN1-209ENST00000472625 PIDD1Q9HB75 910 aa4.47□□□□□ -1.69
XRN1-209ENST00000472625 GGA3Q9NZ52 723 aa4.47□□□□□ -1.69
XRN1-209ENST00000472625 CHPF2Q9P2E5 772 aa4.47□□□□□ -1.69
XRN1-209ENST00000472625 CYP8B1Q9UNU6 501 aa4.47□□□□□ -1.69
XRN1-209ENST00000472625 TTF2Q9UNY4 1162 aaKnown RBP4.47□□□□□ -1.69
XRN1-209ENST00000472625 MED23Q9ULK4 1368 aa4.47□□□□□ -1.69
XRN1-209ENST00000472625 DUOX1Q9NRD9 1551 aa4.47□□□□□ -1.69
XRN1-209ENST00000472625 ANKRD36CQ5JPF3 1778 aa4.47□□□□□ -1.69
XRN1-209ENST00000472625 NUP98P52948 1817 aa4.46□□□□□ -1.69
XRN1-209ENST00000472625 TRPM7Q96QT4 1865 aa4.46□□□□□ -1.7
XRN1-209ENST00000472625 PAPPA2Q9BXP8 1791 aa4.46□□□□□ -1.7
XRN1-209ENST00000472625 RTL9Q8NET4 1388 aa4.46□□□□□ -1.7
XRN1-209ENST00000472625 FAM221AA4D161 298 aa4.46□□□□□ -1.7
XRN1-209ENST00000472625 YDJCA8MPS7 323 aa4.46□□□□□ -1.7
XRN1-209ENST00000472625 PDE8AO60658 829 aa4.46□□□□□ -1.7
XRN1-209ENST00000472625 RNGTTO60942 597 aaKnown RBP4.46□□□□□ -1.7
XRN1-209ENST00000472625 LEFTY1O75610 366 aa4.46□□□□□ -1.7
XRN1-209ENST00000472625 PRNPP04156 253 aa4.46□□□□□ -1.7
XRN1-209ENST00000472625 VIL1P09327 827 aaKnown RBP4.46□□□□□ -1.7
XRN1-209ENST00000472625 CD96P40200 585 aa4.46□□□□□ -1.7
XRN1-209ENST00000472625 MFAP1P55081 439 aaKnown RBP4.46□□□□□ -1.7
XRN1-209ENST00000472625 ZNF280AP59817 542 aaPredicted RBP4.46□□□□□ -1.7
XRN1-209ENST00000472625 BNIP3Q12983 259 aa4.46□□□□□ -1.7
XRN1-209ENST00000472625 PSMD2Q13200 908 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms