RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 RCAN3Q9UKA8 241 aa11.02□□□□□ -0.65
VCL-204ENST00000472585 NOD1Q9Y239 953 aa11.02□□□□□ -0.65
VCL-204ENST00000472585 FAM50BQ9Y247 325 aa11.02□□□□□ -0.65
VCL-204ENST00000472585 PCDHB15Q9Y5E8 787 aa11.02□□□□□ -0.65
VCL-204ENST00000472585 ZNF318Q5VUA4 2279 aa11.02□□□□□ -0.65
VCL-204ENST00000472585 FRMPD2Q68DX3 1309 aaPredicted RBP11.02□□□□□ -0.65
VCL-204ENST00000472585 PTPRSQ13332 1948 aa11.01□□□□□ -0.65
VCL-204ENST00000472585 SIP14410 1827 aa11.01□□□□□ -0.65
VCL-204ENST00000472585 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.01□□□□□ -0.65
VCL-204ENST00000472585 PTPDC1A2A3K4 754 aa11.01□□□□□ -0.65
VCL-204ENST00000472585 TSPY2A6NKD2 308 aa11.01□□□□□ -0.65
VCL-204ENST00000472585 RANBP6O60518 1105 aaKnown RBP11.01□□□□□ -0.65
VCL-204ENST00000472585 CALML3P27482 149 aa11.01□□□□□ -0.65
VCL-204ENST00000472585 CPT1AP50416 773 aa11.01□□□□□ -0.65
VCL-204ENST00000472585 RPS6P62753 249 aaKnown RBP11.01□□□□□ -0.65
VCL-204ENST00000472585 BRDTQ58F21 947 aaPredicted RBP11.01□□□□□ -0.65
VCL-204ENST00000472585 IER5LQ5T953 404 aa11.01□□□□□ -0.65
VCL-204ENST00000472585 SYDE2Q5VT97 1194 aa11.01□□□□□ -0.65
VCL-204ENST00000472585 OR6J1Q8NGC5 347 aa11.01□□□□□ -0.65
VCL-204ENST00000472585 DHX38Q92620 1227 aaKnown RBP11.01□□□□□ -0.65
VCL-204ENST00000472585 KAT2BQ92831 832 aa11.01□□□□□ -0.65
VCL-204ENST00000472585 ZFP91Q96JP5 570 aaPredicted RBP11.01□□□□□ -0.65
VCL-204ENST00000472585 TGS1Q96RS0 853 aaKnown RBP11.01□□□□□ -0.65
VCL-204ENST00000472585 NACAP1Q9BZK3 213 aa11.01□□□□□ -0.65
VCL-204ENST00000472585 CPVLQ9H3G5 476 aa11.01□□□□□ -0.65
VCL-204ENST00000472585 SALL3Q9BXA9 1300 aa11.01□□□□□ -0.65
VCL-204ENST00000472585 ZDBF2Q9HCK1 2354 aa11.01□□□□□ -0.65
VCL-204ENST00000472585 GRXCR2A6NFK2 248 aa11□□□□□ -0.65
VCL-204ENST00000472585 ORC4O43929 436 aa11□□□□□ -0.65
VCL-204ENST00000472585 CCDC96Q2M329 555 aa11□□□□□ -0.65
VCL-204ENST00000472585 NFRKBQ6P4R8 1299 aa11□□□□□ -0.65
VCL-204ENST00000472585 CCDC62Q6P9F0 684 aa11□□□□□ -0.65
VCL-204ENST00000472585 EP400NLQ6ZTU2 488 aa11□□□□□ -0.65
VCL-204ENST00000472585 CCDC155Q8N6L0 562 aa11□□□□□ -0.65
VCL-204ENST00000472585 DCAF4Q8WV16 495 aa11□□□□□ -0.65
VCL-204ENST00000472585 FSD1Q9BTV5 496 aa11□□□□□ -0.65
VCL-204ENST00000472585 UPF3BQ9BZI7 483 aaKnown RBP11□□□□□ -0.65
VCL-204ENST00000472585 SUGCTQ9HAC7 445 aa11□□□□□ -0.65
VCL-204ENST00000472585 COL20A1Q9P218 1284 aa11□□□□□ -0.65
VCL-204ENST00000472585 SCN10AQ9Y5Y9 1956 aa10.99□□□□□ -0.65
VCL-204ENST00000472585 ST18O60284 1047 aa10.99□□□□□ -0.65
VCL-204ENST00000472585 FGAP02671 866 aa10.99□□□□□ -0.65
VCL-204ENST00000472585 SLC3A2P08195 630 aaKnown RBP10.99□□□□□ -0.65
VCL-204ENST00000472585 SNHG28P0DPA3 235 aa10.99□□□□□ -0.65
VCL-204ENST00000472585 PDHBP11177 359 aa10.99□□□□□ -0.65
VCL-204ENST00000472585 ERVK-21P61565 698 aa10.99□□□□□ -0.65
VCL-204ENST00000472585 WDR5P61964 334 aaKnown RBP10.99□□□□□ -0.65
VCL-204ENST00000472585 DEFB103AP81534 67 aa10.99□□□□□ -0.65
VCL-204ENST00000472585 HIC1Q14526 733 aa10.99□□□□□ -0.65
VCL-204ENST00000472585 ALX1Q15699 326 aa10.99□□□□□ -0.65
VCL-204ENST00000472585 LY6KQ17RY6 165 aa10.99□□□□□ -0.65
VCL-204ENST00000472585 LRRFIP1Q32MZ4 808 aaKnown RBP10.99□□□□□ -0.65
VCL-204ENST00000472585 GDF6Q6KF10 455 aaPredicted RBP10.99□□□□□ -0.65
VCL-204ENST00000472585 TRAF7Q6Q0C0 670 aa10.99□□□□□ -0.65
VCL-204ENST00000472585 RNF207Q6ZRF8 634 aa10.99□□□□□ -0.65
VCL-204ENST00000472585 WNT8BQ93098 351 aa10.99□□□□□ -0.65
VCL-204ENST00000472585 RAD9AQ99638 391 aa10.99□□□□□ -0.65
VCL-204ENST00000472585 CHMP4BQ9H444 224 aaKnown RBP10.99□□□□□ -0.65
VCL-204ENST00000472585 TCP11L1Q9NUJ3 509 aa10.99□□□□□ -0.65
VCL-204ENST00000472585 ADD3Q9UEY8 706 aaKnown RBP10.99□□□□□ -0.65
VCL-204ENST00000472585 CTNNA3Q9UI47 895 aa10.99□□□□□ -0.65
VCL-204ENST00000472585 TTC41PQ6P2S7 1318 aa10.99□□□□□ -0.65
VCL-204ENST00000472585 RAD50Q92878 1312 aa10.99□□□□□ -0.65
VCL-204ENST00000472585 TRIOO75962 3097 aa10.99□□□□□ -0.65
VCL-204ENST00000472585 LOC102724159A0A0B4J2E5 919 aa10.98□□□□□ -0.65
VCL-204ENST00000472585 POTEB3A0JP26 581 aa10.98□□□□□ -0.65
VCL-204ENST00000472585 NBNO60934 754 aa10.98□□□□□ -0.65
VCL-204ENST00000472585 TXNP10599 105 aaKnown RBP10.98□□□□□ -0.65
VCL-204ENST00000472585 TOP1P11387 765 aaKnown RBP10.98□□□□□ -0.65
VCL-204ENST00000472585 CHMP4BP1P59074 171 aa10.98□□□□□ -0.65
VCL-204ENST00000472585 ARHGAP1Q07960 439 aa10.98□□□□□ -0.65
VCL-204ENST00000472585 ZNF543Q08ER8 600 aa10.98□□□□□ -0.65
VCL-204ENST00000472585 PWP2Q15269 919 aaKnown RBP10.98□□□□□ -0.65
VCL-204ENST00000472585 PTGISQ16647 500 aa10.98□□□□□ -0.65
VCL-204ENST00000472585 PTPROQ16827 1216 aa10.98□□□□□ -0.65
VCL-204ENST00000472585 POTEBQ6S5H4 581 aa10.98□□□□□ -0.65
VCL-204ENST00000472585 HFE2Q6ZVN8 426 aa10.98□□□□□ -0.65
VCL-204ENST00000472585 FBXO22Q8NEZ5 403 aa10.98□□□□□ -0.65
VCL-204ENST00000472585 AFG1LQ8WV93 481 aa10.98□□□□□ -0.65
VCL-204ENST00000472585 GPATCH3Q96I76 525 aa10.98□□□□□ -0.65
VCL-204ENST00000472585 FAM227BQ96M60 508 aa10.98□□□□□ -0.65
VCL-204ENST00000472585 TAAR1Q96RJ0 339 aa10.98□□□□□ -0.65
VCL-204ENST00000472585 PRKAG3Q9UGI9 489 aa10.98□□□□□ -0.65
VCL-204ENST00000472585 CACNA1AO00555 2505 aa10.97□□□□□ -0.65
VCL-204ENST00000472585 SPTBN4Q9H254 2564 aa10.97□□□□□ -0.65
VCL-204ENST00000472585 A0A0D9SFI3 127 aa10.97□□□□□ -0.65
VCL-204ENST00000472585 H3BQ06 376 aaPredicted RBP10.97□□□□□ -0.65
VCL-204ENST00000472585 KPNA6O60684 536 aa10.97□□□□□ -0.65
VCL-204ENST00000472585 GOLGA8HP0CJ92 632 aa10.97□□□□□ -0.65
VCL-204ENST00000472585 ZNF200P98182 395 aaPredicted RBP10.97□□□□□ -0.65
VCL-204ENST00000472585 PTPN11Q06124 597 aaPredicted RBP10.97□□□□□ -0.65
VCL-204ENST00000472585 PDE4DQ08499 809 aa10.97□□□□□ -0.65
VCL-204ENST00000472585 MBTPS1Q14703 1052 aa10.97□□□□□ -0.65
VCL-204ENST00000472585 PPP2R5BQ15173 497 aa10.97□□□□□ -0.65
VCL-204ENST00000472585 RRP12Q5JTH9 1297 aaKnown RBP10.97□□□□□ -0.65
VCL-204ENST00000472585 CNKSR3Q6P9H4 555 aa10.97□□□□□ -0.65
VCL-204ENST00000472585 ZNF589Q86UQ0 364 aaPredicted RBP10.97□□□□□ -0.65
VCL-204ENST00000472585 CAGE1Q8TC20 777 aa10.97□□□□□ -0.65
VCL-204ENST00000472585 AFAP1L1Q8TED9 768 aa10.97□□□□□ -0.65
VCL-204ENST00000472585 SCFD2Q8WU76 684 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms