RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 ZSWIM6Q9HCJ5 1215 aa13.7□□□□□ -0.22
CLRN1-205ENST00000472224 PDRG1Q9NUG6 133 aa13.7□□□□□ -0.22
CLRN1-205ENST00000472224 COL20A1Q9P218 1284 aa13.7□□□□□ -0.22
CLRN1-205ENST00000472224 GBF1Q92538 1859 aa13.7□□□□□ -0.22
CLRN1-205ENST00000472224 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.69□□□□□ -0.22
CLRN1-205ENST00000472224 B4DLN1 442 aa13.69□□□□□ -0.22
CLRN1-205ENST00000472224 GCOM1H8Y6P7 765 aaPredicted RBP13.69□□□□□ -0.22
CLRN1-205ENST00000472224 POLR2MP0CAP2 368 aa13.69□□□□□ -0.22
CLRN1-205ENST00000472224 SMARCA1P28370 1054 aa13.69□□□□□ -0.22
CLRN1-205ENST00000472224 ADCYAP1R1P41586 468 aa13.69□□□□□ -0.22
CLRN1-205ENST00000472224 MRPL12P52815 198 aaKnown RBP13.69□□□□□ -0.22
CLRN1-205ENST00000472224 LRRC41Q15345 812 aa13.69□□□□□ -0.22
CLRN1-205ENST00000472224 C1orf53Q5VUE5 145 aa13.69□□□□□ -0.22
CLRN1-205ENST00000472224 FCHSD1Q86WN1 690 aa13.69□□□□□ -0.22
CLRN1-205ENST00000472224 ARRDC4Q8NCT1 418 aa13.69□□□□□ -0.22
CLRN1-205ENST00000472224 RGS22Q8NE09 1264 aa13.69□□□□□ -0.22
CLRN1-205ENST00000472224 DNERQ8NFT8 737 aa13.69□□□□□ -0.22
CLRN1-205ENST00000472224 GPKOWQ92917 476 aaPredicted RBP eCLIP13.69□□□□□ -0.22
CLRN1-205ENST00000472224 RMDN3Q96TC7 470 aa13.69□□□□□ -0.22
CLRN1-205ENST00000472224 LARP6Q9BRS8 491 aaKnown RBP13.69□□□□□ -0.22
CLRN1-205ENST00000472224 TM6SF1Q9BZW5 370 aa13.69□□□□□ -0.22
CLRN1-205ENST00000472224 KATNBL1Q9H079 304 aa13.69□□□□□ -0.22
CLRN1-205ENST00000472224 VTA1Q9NP79 307 aa13.69□□□□□ -0.22
CLRN1-205ENST00000472224 MYH7BA7E2Y1 1941 aa13.68□□□□□ -0.22
CLRN1-205ENST00000472224 SYNRGQ9UMZ2 1314 aa13.68□□□□□ -0.22
CLRN1-205ENST00000472224 ADCY6O43306 1168 aa13.68□□□□□ -0.22
CLRN1-205ENST00000472224 PTGS1P23219 599 aa13.68□□□□□ -0.22
CLRN1-205ENST00000472224 CDC27P30260 824 aa13.68□□□□□ -0.22
CLRN1-205ENST00000472224 HSD17B4P51659 736 aa13.68□□□□□ -0.22
CLRN1-205ENST00000472224 MRPS5P82675 430 aaKnown RBP13.68□□□□□ -0.22
CLRN1-205ENST00000472224 TNFAIP2Q03169 654 aa13.68□□□□□ -0.22
CLRN1-205ENST00000472224 TLE2Q04725 743 aa13.68□□□□□ -0.22
CLRN1-205ENST00000472224 TOB2Q14106 344 aaPredicted RBP13.68□□□□□ -0.22
CLRN1-205ENST00000472224 C8orf34Q49A92 452 aa13.68□□□□□ -0.22
CLRN1-205ENST00000472224 RNF180Q86T96 592 aa13.68□□□□□ -0.22
CLRN1-205ENST00000472224 NSUN6Q8TEA1 469 aaKnown RBP13.68□□□□□ -0.22
CLRN1-205ENST00000472224 FERMT2Q96AC1 680 aa13.68□□□□□ -0.22
CLRN1-205ENST00000472224 TIFAQ96CG3 184 aa13.68□□□□□ -0.22
CLRN1-205ENST00000472224 SPC25Q9HBM1 224 aa13.68□□□□□ -0.22
CLRN1-205ENST00000472224 PDGFCQ9NRA1 345 aa13.68□□□□□ -0.22
CLRN1-205ENST00000472224 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.67□□□□□ -0.22
CLRN1-205ENST00000472224 CCDC196A0A1B0GTZ2 297 aa13.67□□□□□ -0.22
CLRN1-205ENST00000472224 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.67□□□□□ -0.22
CLRN1-205ENST00000472224 PPFIA3O75145 1194 aa13.67□□□□□ -0.22
CLRN1-205ENST00000472224 DUSP11O75319 330 aaKnown RBP13.67□□□□□ -0.22
CLRN1-205ENST00000472224 C6orf222P0C671 652 aaPredicted RBP13.67□□□□□ -0.22
CLRN1-205ENST00000472224 ADD1P35611 737 aaKnown RBP13.67□□□□□ -0.22
CLRN1-205ENST00000472224 PBX2P40425 430 aa13.67□□□□□ -0.22
CLRN1-205ENST00000472224 RCAN1P53805 252 aa13.67□□□□□ -0.22
CLRN1-205ENST00000472224 ANAPC15P60006 121 aa13.67□□□□□ -0.22
CLRN1-205ENST00000472224 CCT2P78371 535 aaKnown RBP13.67□□□□□ -0.22
CLRN1-205ENST00000472224 STK3Q13188 491 aa13.67□□□□□ -0.22
CLRN1-205ENST00000472224 ADGRE1Q14246 886 aa13.67□□□□□ -0.22
CLRN1-205ENST00000472224 TLK2Q86UE8 772 aa13.67□□□□□ -0.22
CLRN1-205ENST00000472224 SMARCC2Q8TAQ2 1214 aa13.67□□□□□ -0.22
CLRN1-205ENST00000472224 MORC4Q8TE76 937 aa13.67□□□□□ -0.22
CLRN1-205ENST00000472224 CUL5Q93034 780 aa13.67□□□□□ -0.22
CLRN1-205ENST00000472224 PRDM12Q9H4Q4 367 aa13.67□□□□□ -0.22
CLRN1-205ENST00000472224 NCOA5Q9HCD5 579 aaKnown RBP13.67□□□□□ -0.22
CLRN1-205ENST00000472224 PXMP2Q9NR77 195 aa13.67□□□□□ -0.22
CLRN1-205ENST00000472224 FAM217BQ9NTX9 383 aaPredicted RBP13.67□□□□□ -0.22
CLRN1-205ENST00000472224 TRANK1O15050 2925 aa13.67□□□□□ -0.22
CLRN1-205ENST00000472224 LOC102724159A0A0B4J2E5 919 aa13.66□□□□□ -0.22
CLRN1-205ENST00000472224 MYADML2A6NDP7 307 aa13.66□□□□□ -0.22
CLRN1-205ENST00000472224 MYCLP12524 364 aaPredicted RBP13.66□□□□□ -0.22
CLRN1-205ENST00000472224 SMPD1P17405 629 aa13.66□□□□□ -0.22
CLRN1-205ENST00000472224 EDNRBP24530 442 aa13.66□□□□□ -0.22
CLRN1-205ENST00000472224 NAPAP54920 295 aa13.66□□□□□ -0.22
CLRN1-205ENST00000472224 IRX5P78411 483 aaPredicted RBP13.66□□□□□ -0.22
CLRN1-205ENST00000472224 GSE1Q14687 1217 aa13.66□□□□□ -0.22
CLRN1-205ENST00000472224 PPP2R5BQ15173 497 aa13.66□□□□□ -0.22
CLRN1-205ENST00000472224 PWP2Q15269 919 aaKnown RBP13.66□□□□□ -0.22
CLRN1-205ENST00000472224 CCDC85BQ15834 202 aaPredicted RBP13.66□□□□□ -0.22
CLRN1-205ENST00000472224 WWC2Q6AWC2 1192 aa13.66□□□□□ -0.22
CLRN1-205ENST00000472224 TAPT1Q6NXT6 567 aa13.66□□□□□ -0.22
CLRN1-205ENST00000472224 C1QTNF1Q9BXJ1 281 aa13.66□□□□□ -0.22
CLRN1-205ENST00000472224 AGXT2Q9BYV1 514 aa13.66□□□□□ -0.22
CLRN1-205ENST00000472224 WDR11Q9BZH6 1224 aa13.66□□□□□ -0.22
CLRN1-205ENST00000472224 MAF1Q9H063 256 aa13.66□□□□□ -0.22
CLRN1-205ENST00000472224 AP5M1Q9H0R1 490 aa13.66□□□□□ -0.22
CLRN1-205ENST00000472224 ARIH1Q9Y4X5 557 aaPredicted RBP13.66□□□□□ -0.22
CLRN1-205ENST00000472224 GTF3C3Q9Y5Q9 886 aa13.66□□□□□ -0.22
CLRN1-205ENST00000472224 V9GY48 417 aaPredicted RBP13.66□□□□□ -0.22
CLRN1-205ENST00000472224 NID2Q14112 1375 aa13.66□□□□□ -0.22
CLRN1-205ENST00000472224 DOCK5Q9H7D0 1870 aa13.65□□□□□ -0.22
CLRN1-205ENST00000472224 GRXCR1A8MXD5 290 aa13.65□□□□□ -0.22
CLRN1-205ENST00000472224 KIAA0355O15063 1070 aa13.65□□□□□ -0.22
CLRN1-205ENST00000472224 ADAMTS4O75173 837 aa13.65□□□□□ -0.22
CLRN1-205ENST00000472224 CLTBP09497 229 aa13.65□□□□□ -0.22
CLRN1-205ENST00000472224 PDIA3P30101 505 aaKnown RBP13.65□□□□□ -0.22
CLRN1-205ENST00000472224 BEX3Q00994 111 aa13.65□□□□□ -0.22
CLRN1-205ENST00000472224 AKAP17AQ02040 695 aaKnown RBP13.65□□□□□ -0.22
CLRN1-205ENST00000472224 FPGSQ05932 587 aa13.65□□□□□ -0.22
CLRN1-205ENST00000472224 FUT2Q10981 343 aa13.65□□□□□ -0.22
CLRN1-205ENST00000472224 STXBP2Q15833 593 aa13.65□□□□□ -0.22
CLRN1-205ENST00000472224 UBE2SQ16763 222 aa13.65□□□□□ -0.22
CLRN1-205ENST00000472224 TMEM63BQ5T3F8 832 aa13.65□□□□□ -0.22
CLRN1-205ENST00000472224 USP17L6PQ6QN14 398 aa13.65□□□□□ -0.22
CLRN1-205ENST00000472224 SEPT14Q6ZU15 432 aa13.65□□□□□ -0.22
CLRN1-205ENST00000472224 FBXL16Q8N461 479 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms