RNA–Protein interactions for RNA: ENST00000472103.5

SMARCD3-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-207ENST00000472103 PRKAR2AP13861 404 aaKnown RBP16.72■□□□□ 0.27
SMARCD3-207ENST00000472103 U2AF2P26368 475 aaKnown RBP eCLIP16.72■□□□□ 0.27
SMARCD3-207ENST00000472103 CCND2P30279 289 aa16.72■□□□□ 0.27
SMARCD3-207ENST00000472103 CCND3P30281 292 aaPredicted RBP16.72■□□□□ 0.27
SMARCD3-207ENST00000472103 NONOQ15233 471 aaKnown RBP eCLIP16.72■□□□□ 0.27
SMARCD3-207ENST00000472103 PWP2Q15269 919 aaKnown RBP16.72■□□□□ 0.27
SMARCD3-207ENST00000472103 SAFBQ15424 915 aaKnown RBP eCLIP16.72■□□□□ 0.27
SMARCD3-207ENST00000472103 MAP3K21Q5TCX8 1036 aa16.72■□□□□ 0.27
SMARCD3-207ENST00000472103 MFSD14CQ5VZR4 134 aa16.72■□□□□ 0.27
SMARCD3-207ENST00000472103 PCNX4Q63HM2 1172 aa16.72■□□□□ 0.27
SMARCD3-207ENST00000472103 MCTP1Q6DN14 999 aa16.72■□□□□ 0.27
SMARCD3-207ENST00000472103 TAPT1Q6NXT6 567 aa16.72■□□□□ 0.27
SMARCD3-207ENST00000472103 FERMT3Q86UX7 667 aa16.72■□□□□ 0.27
SMARCD3-207ENST00000472103 TRMT44Q8IYL2 757 aaKnown RBP16.72■□□□□ 0.27
SMARCD3-207ENST00000472103 CYP2W1Q8TAV3 490 aa16.72■□□□□ 0.27
SMARCD3-207ENST00000472103 FOXP1Q9H334 677 aaPredicted RBP16.72■□□□□ 0.27
SMARCD3-207ENST00000472103 UBIAD1Q9Y5Z9 338 aa16.72■□□□□ 0.27
SMARCD3-207ENST00000472103 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.71■□□□□ 0.27
SMARCD3-207ENST00000472103 ADCY6O43306 1168 aa16.71■□□□□ 0.27
SMARCD3-207ENST00000472103 ARIH2O95376 493 aa16.71■□□□□ 0.27
SMARCD3-207ENST00000472103 CYP3A4P08684 503 aa16.71■□□□□ 0.27
SMARCD3-207ENST00000472103 ITGB5P18084 799 aa16.71■□□□□ 0.27
SMARCD3-207ENST00000472103 DDIT3P35638 169 aa16.71■□□□□ 0.27
SMARCD3-207ENST00000472103 RESTQ13127 1097 aa16.71■□□□□ 0.27
SMARCD3-207ENST00000472103 SEMA3FQ13275 785 aa16.71■□□□□ 0.27
SMARCD3-207ENST00000472103 ACVR2BQ13705 512 aa16.71■□□□□ 0.27
SMARCD3-207ENST00000472103 MTFR1Q15390 333 aa16.71■□□□□ 0.27
SMARCD3-207ENST00000472103 STXBP2Q15833 593 aa16.71■□□□□ 0.27
SMARCD3-207ENST00000472103 PKN2Q16513 984 aaKnown RBP16.71■□□□□ 0.27
SMARCD3-207ENST00000472103 COL13A1Q5TAT6 717 aaPredicted RBP16.71■□□□□ 0.27
SMARCD3-207ENST00000472103 FOXD4L5Q5VV16 416 aaPredicted RBP16.71■□□□□ 0.27
SMARCD3-207ENST00000472103 FOXD4L4Q8WXT5 416 aaPredicted RBP16.71■□□□□ 0.27
SMARCD3-207ENST00000472103 ZHX1Q9UKY1 873 aaPredicted RBP16.71■□□□□ 0.27
SMARCD3-207ENST00000472103 FAM86B1E9PN63 330 aa16.7■□□□□ 0.26
SMARCD3-207ENST00000472103 TDP2O95551 362 aa16.7■□□□□ 0.26
SMARCD3-207ENST00000472103 MYCP01106 439 aaPredicted RBP16.7■□□□□ 0.26
SMARCD3-207ENST00000472103 FAM86B2P0C5J1 330 aa16.7■□□□□ 0.26
SMARCD3-207ENST00000472103 PDCP20941 246 aa16.7■□□□□ 0.26
SMARCD3-207ENST00000472103 ADCYAP1R1P41586 468 aa16.7■□□□□ 0.26
SMARCD3-207ENST00000472103 SLC9C1Q4G0N8 1177 aa16.7■□□□□ 0.26
SMARCD3-207ENST00000472103 MCTP2Q6DN12 878 aa16.7■□□□□ 0.26
SMARCD3-207ENST00000472103 SEPT14Q6ZU15 432 aa16.7■□□□□ 0.26
SMARCD3-207ENST00000472103 NOSTRINQ8IVI9 506 aa16.7■□□□□ 0.26
SMARCD3-207ENST00000472103 LENG1Q96BZ8 264 aaPredicted RBP16.7■□□□□ 0.26
SMARCD3-207ENST00000472103 MXRA8Q9BRK3 442 aa16.7■□□□□ 0.26
SMARCD3-207ENST00000472103 WDR11Q9BZH6 1224 aa16.7■□□□□ 0.26
SMARCD3-207ENST00000472103 ABHD16BQ9H3Z7 469 aa16.7■□□□□ 0.26
SMARCD3-207ENST00000472103 EHMT1Q9H9B1 1298 aa16.7■□□□□ 0.26
SMARCD3-207ENST00000472103 ZDHHC9Q9Y397 364 aa16.7■□□□□ 0.26
SMARCD3-207ENST00000472103 DOCK5Q9H7D0 1870 aa16.69■□□□□ 0.26
SMARCD3-207ENST00000472103 IGLV3-22A0A075B6J6 115 aa16.69■□□□□ 0.26
SMARCD3-207ENST00000472103 EIF3JO75822 258 aaKnown RBP16.69■□□□□ 0.26
SMARCD3-207ENST00000472103 CIITAP33076 1130 aa16.69■□□□□ 0.26
SMARCD3-207ENST00000472103 TOB1P50616 345 aaPredicted RBP16.69■□□□□ 0.26
SMARCD3-207ENST00000472103 NBR1Q14596 966 aa16.69■□□□□ 0.26
SMARCD3-207ENST00000472103 GJC2Q5T442 439 aaPredicted RBP16.69■□□□□ 0.26
SMARCD3-207ENST00000472103 ANO1Q5XXA6 986 aa16.69■□□□□ 0.26
SMARCD3-207ENST00000472103 FAM173BQ6P4H8 233 aa16.69■□□□□ 0.26
SMARCD3-207ENST00000472103 NEK8Q86SG6 692 aa16.69■□□□□ 0.26
SMARCD3-207ENST00000472103 COPS5Q92905 334 aa16.69■□□□□ 0.26
SMARCD3-207ENST00000472103 INPP4AQ96PE3 977 aaPredicted RBP16.69■□□□□ 0.26
SMARCD3-207ENST00000472103 UIMC1Q96RL1 719 aa16.69■□□□□ 0.26
SMARCD3-207ENST00000472103 UNC93B1Q9H1C4 597 aa16.69■□□□□ 0.26
SMARCD3-207ENST00000472103 VTA1Q9NP79 307 aa16.69■□□□□ 0.26
SMARCD3-207ENST00000472103 RBM47A0AV96 593 aaKnown RBP16.68■□□□□ 0.26
SMARCD3-207ENST00000472103 B4DLN1 442 aa16.68■□□□□ 0.26
SMARCD3-207ENST00000472103 ARP10275 920 aa16.68■□□□□ 0.26
SMARCD3-207ENST00000472103 ATP2B1P20020 1258 aa16.68■□□□□ 0.26
SMARCD3-207ENST00000472103 GNL2Q13823 731 aaKnown RBP16.68■□□□□ 0.26
SMARCD3-207ENST00000472103 LETM2Q2VYF4 491 aa16.68■□□□□ 0.26
SMARCD3-207ENST00000472103 CCDC144BQ3MJ40 725 aa16.68■□□□□ 0.26
SMARCD3-207ENST00000472103 LENG9Q96B70 501 aa16.68■□□□□ 0.26
SMARCD3-207ENST00000472103 ARMC5Q96C12 935 aa16.68■□□□□ 0.26
SMARCD3-207ENST00000472103 ZNF333Q96JL9 665 aa16.68■□□□□ 0.26
SMARCD3-207ENST00000472103 BCAS3Q9H6U6 928 aa16.68■□□□□ 0.26
SMARCD3-207ENST00000472103 JADE2Q9NQC1 790 aa16.68■□□□□ 0.26
SMARCD3-207ENST00000472103 CNPY2Q9Y2B0 182 aa16.68■□□□□ 0.26
SMARCD3-207ENST00000472103 HTTP42858 3142 aa16.68■□□□□ 0.26
SMARCD3-207ENST00000472103 POTEFA5A3E0 1075 aa16.67■□□□□ 0.26
SMARCD3-207ENST00000472103 MEIS1O00470 390 aa16.67■□□□□ 0.26
SMARCD3-207ENST00000472103 SLC37A4O43826 429 aa16.67■□□□□ 0.26
SMARCD3-207ENST00000472103 ATP9AO75110 1047 aa16.67■□□□□ 0.26
SMARCD3-207ENST00000472103 BRD1O95696 1058 aa16.67■□□□□ 0.26
SMARCD3-207ENST00000472103 SMPD1P17405 629 aa16.67■□□□□ 0.26
SMARCD3-207ENST00000472103 USP11P51784 963 aa16.67■□□□□ 0.26
SMARCD3-207ENST00000472103 IRX5P78411 483 aaPredicted RBP16.67■□□□□ 0.26
SMARCD3-207ENST00000472103 SP2Q02086 613 aa16.67■□□□□ 0.26
SMARCD3-207ENST00000472103 LY6KQ17RY6 165 aa16.67■□□□□ 0.26
SMARCD3-207ENST00000472103 CEP55Q53EZ4 464 aa16.67■□□□□ 0.26
SMARCD3-207ENST00000472103 XRRA1Q6P2D8 792 aa16.67■□□□□ 0.26
SMARCD3-207ENST00000472103 CCDC62Q6P9F0 684 aa16.67■□□□□ 0.26
SMARCD3-207ENST00000472103 MBOAT7Q96N66 472 aa16.67■□□□□ 0.26
SMARCD3-207ENST00000472103 MPHOSPH6Q99547 160 aaKnown RBP16.67■□□□□ 0.26
SMARCD3-207ENST00000472103 NRBP1Q9UHY1 535 aa16.67■□□□□ 0.26
SMARCD3-207ENST00000472103 FRMPD3Q5JV73 1810 aa16.67■□□□□ 0.26
SMARCD3-207ENST00000472103 MYH15Q9Y2K3 1946 aa16.66■□□□□ 0.26
SMARCD3-207ENST00000472103 SORBS3O60504 671 aa16.66■□□□□ 0.26
SMARCD3-207ENST00000472103 ZSCAN22P10073 491 aaPredicted RBP16.66■□□□□ 0.26
SMARCD3-207ENST00000472103 CNGA1P29973 690 aa16.66■□□□□ 0.26
SMARCD3-207ENST00000472103 ICAM3P32942 547 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms