RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 KCNV1Q6PIU1 500 aa17.31■□□□□ 0.36
SNX13-205ENST00000471744 CCDC83Q8IWF9 413 aa17.31■□□□□ 0.36
SNX13-205ENST00000471744 REXO1Q8N1G1 1221 aaKnown RBP17.31■□□□□ 0.36
SNX13-205ENST00000471744 XPNPEP3Q9NQH7 507 aa17.31■□□□□ 0.36
SNX13-205ENST00000471744 PCDHA6Q9UN73 950 aa17.31■□□□□ 0.36
SNX13-205ENST00000471744 PCDHA8Q9Y5H6 950 aa17.31■□□□□ 0.36
SNX13-205ENST00000471744 MYH7BA7E2Y1 1941 aa17.3■□□□□ 0.36
SNX13-205ENST00000471744 FARP2O94887 1054 aaPredicted RBP17.3■□□□□ 0.36
SNX13-205ENST00000471744 MYCLP12524 364 aaPredicted RBP17.3■□□□□ 0.36
SNX13-205ENST00000471744 ADCYAP1R1P41586 468 aa17.3■□□□□ 0.36
SNX13-205ENST00000471744 CLK2P49760 499 aaKnown RBP17.3■□□□□ 0.36
SNX13-205ENST00000471744 RGS19P49795 217 aa17.3■□□□□ 0.36
SNX13-205ENST00000471744 GNPTABQ3T906 1256 aa17.3■□□□□ 0.36
SNX13-205ENST00000471744 DUSP28Q4G0W2 176 aa17.3■□□□□ 0.36
SNX13-205ENST00000471744 RNF180Q86T96 592 aa17.3■□□□□ 0.36
SNX13-205ENST00000471744 WDR11Q9BZH6 1224 aa17.3■□□□□ 0.36
SNX13-205ENST00000471744 DDX49Q9Y6V7 483 aaKnown RBP17.3■□□□□ 0.36
SNX13-205ENST00000471744 DNM1LO00429 736 aa17.29■□□□□ 0.36
SNX13-205ENST00000471744 TGFB3P10600 412 aa17.29■□□□□ 0.36
SNX13-205ENST00000471744 ST3GAL1Q11201 340 aa17.29■□□□□ 0.36
SNX13-205ENST00000471744 ANO1Q5XXA6 986 aa17.29■□□□□ 0.36
SNX13-205ENST00000471744 DAGLBQ8NCG7 672 aa17.29■□□□□ 0.36
SNX13-205ENST00000471744 ALG1Q9BT22 464 aa17.29■□□□□ 0.36
SNX13-205ENST00000471744 ANO3Q9BYT9 981 aa17.29■□□□□ 0.36
SNX13-205ENST00000471744 UPF3AQ9H1J1 476 aaKnown RBP17.29■□□□□ 0.36
SNX13-205ENST00000471744 PDGFCQ9NRA1 345 aa17.29■□□□□ 0.36
SNX13-205ENST00000471744 PCDHA4Q9UN74 947 aa17.29■□□□□ 0.36
SNX13-205ENST00000471744 GNEQ9Y223 722 aaKnown RBP17.29■□□□□ 0.36
SNX13-205ENST00000471744 KBTBD13C9JR72 458 aa17.28■□□□□ 0.36
SNX13-205ENST00000471744 SMPD1P17405 629 aa17.28■□□□□ 0.36
SNX13-205ENST00000471744 CST5P28325 142 aaPredicted RBP17.28■□□□□ 0.36
SNX13-205ENST00000471744 GJA9P57773 515 aa17.28■□□□□ 0.36
SNX13-205ENST00000471744 NKX3-2P78367 333 aa17.28■□□□□ 0.36
SNX13-205ENST00000471744 SEPT14Q6ZU15 432 aa17.28■□□□□ 0.36
SNX13-205ENST00000471744 TLK2Q86UE8 772 aa17.28■□□□□ 0.36
SNX13-205ENST00000471744 NLRX1Q86UT6 975 aa17.28■□□□□ 0.36
SNX13-205ENST00000471744 IL31RAQ8NI17 732 aa17.28■□□□□ 0.36
SNX13-205ENST00000471744 TMX3Q96JJ7 454 aa17.28■□□□□ 0.36
SNX13-205ENST00000471744 AP5M1Q9H0R1 490 aa17.28■□□□□ 0.36
SNX13-205ENST00000471744 KIF3AQ9Y496 699 aa17.28■□□□□ 0.36
SNX13-205ENST00000471744 SYNRGQ9UMZ2 1314 aa17.27■□□□□ 0.36
SNX13-205ENST00000471744 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.27■□□□□ 0.36
SNX13-205ENST00000471744 ADAMTS4O75173 837 aa17.27■□□□□ 0.36
SNX13-205ENST00000471744 TXNP10599 105 aaKnown RBP17.27■□□□□ 0.36
SNX13-205ENST00000471744 FDPSP14324 419 aaKnown RBP17.27■□□□□ 0.36
SNX13-205ENST00000471744 SREBF1P36956 1147 aa17.27■□□□□ 0.36
SNX13-205ENST00000471744 TRIM29Q14134 588 aa17.27■□□□□ 0.36
SNX13-205ENST00000471744 LRRC41Q15345 812 aa17.27■□□□□ 0.36
SNX13-205ENST00000471744 BRDTQ58F21 947 aaPredicted RBP17.27■□□□□ 0.36
SNX13-205ENST00000471744 JAKMIP3Q5VZ66 844 aa17.27■□□□□ 0.36
SNX13-205ENST00000471744 NECAB2Q7Z6G3 386 aa17.27■□□□□ 0.36
SNX13-205ENST00000471744 BLIDQ8IZY5 108 aa17.27■□□□□ 0.36
SNX13-205ENST00000471744 PCSK9Q8NBP7 692 aaKnown RBP17.27■□□□□ 0.36
SNX13-205ENST00000471744 CDHR1Q96JP9 859 aa17.27■□□□□ 0.36
SNX13-205ENST00000471744 AIFM3Q96NN9 605 aa17.27■□□□□ 0.36
SNX13-205ENST00000471744 INPP4AQ96PE3 977 aaPredicted RBP17.27■□□□□ 0.36
SNX13-205ENST00000471744 TSEN34Q9BSV6 310 aaKnown RBP17.27■□□□□ 0.36
SNX13-205ENST00000471744 PHF20Q9BVI0 1012 aa17.27■□□□□ 0.36
SNX13-205ENST00000471744 BRMS1Q9HCU9 246 aa17.27■□□□□ 0.36
SNX13-205ENST00000471744 MRVI1Q9Y6F6 885 aa17.27■□□□□ 0.36
SNX13-205ENST00000471744 PDE4DIPQ5VU43 2346 aa17.26■□□□□ 0.35
SNX13-205ENST00000471744 ADCY6O43306 1168 aa17.26■□□□□ 0.35
SNX13-205ENST00000471744 ZEB2O60315 1214 aa17.26■□□□□ 0.35
SNX13-205ENST00000471744 JAK2O60674 1132 aa17.26■□□□□ 0.35
SNX13-205ENST00000471744 CD2BP2O95400 341 aaKnown RBP17.26■□□□□ 0.35
SNX13-205ENST00000471744 PGK1P00558 417 aa17.26■□□□□ 0.35
SNX13-205ENST00000471744 C6orf222P0C671 652 aaPredicted RBP17.26■□□□□ 0.35
SNX13-205ENST00000471744 ICAM3P32942 547 aa17.26■□□□□ 0.35
SNX13-205ENST00000471744 MRPS9P82933 396 aaKnown RBP17.26■□□□□ 0.35
SNX13-205ENST00000471744 CCDC62Q6P9F0 684 aa17.26■□□□□ 0.35
SNX13-205ENST00000471744 UBE2Q1Q7Z7E8 422 aa17.26■□□□□ 0.35
SNX13-205ENST00000471744 FAM184AQ8NB25 1140 aa17.26■□□□□ 0.35
SNX13-205ENST00000471744 GPRASP2Q96D09 838 aa17.26■□□□□ 0.35
SNX13-205ENST00000471744 MOXD2PA6NHM9 499 aa17.25■□□□□ 0.35
SNX13-205ENST00000471744 MAFGO15525 162 aa17.25■□□□□ 0.35
SNX13-205ENST00000471744 DYNC1LI2O43237 492 aaPredicted RBP17.25■□□□□ 0.35
SNX13-205ENST00000471744 FIBPO43427 364 aa17.25■□□□□ 0.35
SNX13-205ENST00000471744 RGS20O76081 388 aa17.25■□□□□ 0.35
SNX13-205ENST00000471744 GH1P01241 217 aa17.25■□□□□ 0.35
SNX13-205ENST00000471744 GJC2Q5T442 439 aaPredicted RBP17.25■□□□□ 0.35
SNX13-205ENST00000471744 KLHDC9Q8NEP7 349 aa17.25■□□□□ 0.35
SNX13-205ENST00000471744 LENG1Q96BZ8 264 aaPredicted RBP17.25■□□□□ 0.35
SNX13-205ENST00000471744 TMEM260Q9NX78 707 aa17.25■□□□□ 0.35
SNX13-205ENST00000471744 DDX41Q9UJV9 622 aaKnown RBP17.25■□□□□ 0.35
SNX13-205ENST00000471744 CYP3A4P08684 503 aa17.24■□□□□ 0.35
SNX13-205ENST00000471744 MNX1P50219 401 aaPredicted RBP17.24■□□□□ 0.35
SNX13-205ENST00000471744 CPT1AP50416 773 aa17.24■□□□□ 0.35
SNX13-205ENST00000471744 ARHGAP4P98171 946 aa17.24■□□□□ 0.35
SNX13-205ENST00000471744 GNASQ5JWF2 1037 aa17.24■□□□□ 0.35
SNX13-205ENST00000471744 KRT25Q7Z3Z0 450 aa17.24■□□□□ 0.35
SNX13-205ENST00000471744 GIMAP8Q8ND71 665 aaPredicted RBP17.24■□□□□ 0.35
SNX13-205ENST00000471744 OR6J1Q8NGC5 347 aa17.24■□□□□ 0.35
SNX13-205ENST00000471744 PAWRQ96IZ0 340 aaKnown RBP17.24■□□□□ 0.35
SNX13-205ENST00000471744 PGBD1Q96JS3 809 aa17.24■□□□□ 0.35
SNX13-205ENST00000471744 HTATIP2Q9BUP3 242 aa17.24■□□□□ 0.35
SNX13-205ENST00000471744 C11orf49Q9H6J7 331 aa17.24■□□□□ 0.35
SNX13-205ENST00000471744 KCNJ14Q9UNX9 436 aa17.24■□□□□ 0.35
SNX13-205ENST00000471744 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.24■□□□□ 0.35
SNX13-205ENST00000471744 UBIAD1Q9Y5Z9 338 aa17.24■□□□□ 0.35
SNX13-205ENST00000471744 SPATA31C2B4DYI2 1134 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms