RNA–Protein interactions for RNA: ENST00000471724.5

SSR4-207, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-207ENST00000471724 PGBD1Q96JS3 809 aa16.02■□□□□ 0.16
SSR4-207ENST00000471724 DAXXQ9UER7 740 aaPredicted RBP16.02■□□□□ 0.16
SSR4-207ENST00000471724 VPS37CA5D8V6 355 aaPredicted RBP16.01■□□□□ 0.15
SSR4-207ENST00000471724 BTBD18B2RXH4 712 aa16.01■□□□□ 0.15
SSR4-207ENST00000471724 EIF3JO75822 258 aaKnown RBP16.01■□□□□ 0.15
SSR4-207ENST00000471724 SNAI1O95863 264 aaPredicted RBP16.01■□□□□ 0.15
SSR4-207ENST00000471724 CACNB2Q08289 660 aaPredicted RBP16.01■□□□□ 0.15
SSR4-207ENST00000471724 NR5A1Q13285 461 aa16.01■□□□□ 0.15
SSR4-207ENST00000471724 ACVR2BQ13705 512 aa16.01■□□□□ 0.15
SSR4-207ENST00000471724 VSIG10LQ86VR7 867 aa16.01■□□□□ 0.15
SSR4-207ENST00000471724 FBXO16Q8IX29 292 aaPredicted RBP16.01■□□□□ 0.15
SSR4-207ENST00000471724 OXER1Q8TDS5 423 aa16.01■□□□□ 0.15
SSR4-207ENST00000471724 TNFRSF25Q93038 417 aa16.01■□□□□ 0.15
SSR4-207ENST00000471724 NAP1L4Q99733 375 aaKnown RBP16.01■□□□□ 0.15
SSR4-207ENST00000471724 TSHZ2Q9NRE2 1034 aa16.01■□□□□ 0.15
SSR4-207ENST00000471724 ZHX1Q9UKY1 873 aaPredicted RBP16.01■□□□□ 0.15
SSR4-207ENST00000471724 DOCK5Q9H7D0 1870 aa16■□□□□ 0.15
SSR4-207ENST00000471724 POTEFA5A3E0 1075 aa16■□□□□ 0.15
SSR4-207ENST00000471724 ADAMTS3O15072 1205 aa16■□□□□ 0.15
SSR4-207ENST00000471724 MSCO60682 206 aa16■□□□□ 0.15
SSR4-207ENST00000471724 CYP3A4P08684 503 aa16■□□□□ 0.15
SSR4-207ENST00000471724 AKR1A1P14550 325 aa16■□□□□ 0.15
SSR4-207ENST00000471724 MCTP1Q6DN14 999 aa16■□□□□ 0.15
SSR4-207ENST00000471724 PIK3AP1Q6ZUJ8 805 aa16■□□□□ 0.15
SSR4-207ENST00000471724 NLRX1Q86UT6 975 aa16■□□□□ 0.15
SSR4-207ENST00000471724 NOSTRINQ8IVI9 506 aa16■□□□□ 0.15
SSR4-207ENST00000471724 TBCKQ8TEA7 893 aa16■□□□□ 0.15
SSR4-207ENST00000471724 SCFD2Q8WU76 684 aa16■□□□□ 0.15
SSR4-207ENST00000471724 CRYGNQ8WXF5 182 aa16■□□□□ 0.15
SSR4-207ENST00000471724 CDHR1Q96JP9 859 aa16■□□□□ 0.15
SSR4-207ENST00000471724 INPP4AQ96PE3 977 aaPredicted RBP16■□□□□ 0.15
SSR4-207ENST00000471724 KATNBL1Q9H079 304 aa16■□□□□ 0.15
SSR4-207ENST00000471724 HMX1Q9NP08 348 aaPredicted RBP16■□□□□ 0.15
SSR4-207ENST00000471724 KIAA0100Q14667 2235 aaKnown RBP16■□□□□ 0.15
SSR4-207ENST00000471724 STX6O43752 255 aa15.99■□□□□ 0.15
SSR4-207ENST00000471724 CCL5P13501 91 aa15.99■□□□□ 0.15
SSR4-207ENST00000471724 GCFC2P16383 781 aaKnown RBP15.99■□□□□ 0.15
SSR4-207ENST00000471724 SYT1P21579 422 aa15.99■□□□□ 0.15
SSR4-207ENST00000471724 U2AF2P26368 475 aaKnown RBP eCLIP15.99■□□□□ 0.155e-15■■■□□ 14.8
SSR4-207ENST00000471724 USP11P51784 963 aa15.99■□□□□ 0.15
SSR4-207ENST00000471724 MRPS9P82933 396 aaKnown RBP15.99■□□□□ 0.15
SSR4-207ENST00000471724 SETQ01105 290 aaPredicted RBP15.99■□□□□ 0.15
SSR4-207ENST00000471724 TRIM32Q13049 653 aa15.99■□□□□ 0.15
SSR4-207ENST00000471724 KCNV1Q6PIU1 500 aa15.99■□□□□ 0.15
SSR4-207ENST00000471724 MOXD1Q6UVY6 613 aa15.99■□□□□ 0.15
SSR4-207ENST00000471724 EEPD1Q7L9B9 569 aa15.99■□□□□ 0.15
SSR4-207ENST00000471724 NIPA1Q7RTP0 329 aa15.99■□□□□ 0.15
SSR4-207ENST00000471724 NEK8Q86SG6 692 aa15.99■□□□□ 0.15
SSR4-207ENST00000471724 SPRYD3Q8NCJ5 442 aa15.99■□□□□ 0.15
SSR4-207ENST00000471724 GPRASP2Q96D09 838 aa15.99■□□□□ 0.15
SSR4-207ENST00000471724 NOL7Q9UMY1 257 aaKnown RBP15.99■□□□□ 0.15
SSR4-207ENST00000471724 SEPT4O43236 478 aa15.98■□□□□ 0.15
SSR4-207ENST00000471724 FIBPO43427 364 aa15.98■□□□□ 0.15
SSR4-207ENST00000471724 MYCP01106 439 aaPredicted RBP15.98■□□□□ 0.15
SSR4-207ENST00000471724 GJB1P08034 283 aa15.98■□□□□ 0.15
SSR4-207ENST00000471724 ZNF865P0CJ78 1059 aaPredicted RBP15.98■□□□□ 0.15
SSR4-207ENST00000471724 ZNF76P36508 570 aa15.98■□□□□ 0.15
SSR4-207ENST00000471724 TTLL4Q14679 1199 aa15.98■□□□□ 0.15
SSR4-207ENST00000471724 MTFR1Q15390 333 aa15.98■□□□□ 0.15
SSR4-207ENST00000471724 INF2Q27J81 1249 aa15.98■□□□□ 0.15
SSR4-207ENST00000471724 CEP55Q53EZ4 464 aa15.98■□□□□ 0.15
SSR4-207ENST00000471724 BRAPQ7Z569 592 aa15.98■□□□□ 0.15
SSR4-207ENST00000471724 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.98■□□□□ 0.15
SSR4-207ENST00000471724 RNF208Q9H0X6 261 aa15.98■□□□□ 0.15
SSR4-207ENST00000471724 FAM184BQ9ULE4 1060 aa15.98■□□□□ 0.15
SSR4-207ENST00000471724 RBM19Q9Y4C8 960 aaKnown RBP15.98■□□□□ 0.15
SSR4-207ENST00000471724 UBIAD1Q9Y5Z9 338 aa15.98■□□□□ 0.15
SSR4-207ENST00000471724 DDX49Q9Y6V7 483 aaKnown RBP15.98■□□□□ 0.15
SSR4-207ENST00000471724 RBM47A0AV96 593 aaKnown RBP15.97■□□□□ 0.15
SSR4-207ENST00000471724 NKRFO15226 690 aaKnown RBP eCLIP15.97■□□□□ 0.15
SSR4-207ENST00000471724 MAFGO15525 162 aa15.97■□□□□ 0.15
SSR4-207ENST00000471724 CNGA1P29973 690 aa15.97■□□□□ 0.15
SSR4-207ENST00000471724 CCND3P30281 292 aaPredicted RBP15.97■□□□□ 0.15
SSR4-207ENST00000471724 CIITAP33076 1130 aa15.97■□□□□ 0.15
SSR4-207ENST00000471724 TRAPPC10P48553 1259 aa15.97■□□□□ 0.15
SSR4-207ENST00000471724 MTMR1Q13613 665 aa15.97■□□□□ 0.15
SSR4-207ENST00000471724 CCDC144BQ3MJ40 725 aa15.97■□□□□ 0.15
SSR4-207ENST00000471724 MXRA8Q9BRK3 442 aa15.97■□□□□ 0.15
SSR4-207ENST00000471724 MRVI1Q9Y6F6 885 aa15.97■□□□□ 0.15
SSR4-207ENST00000471724 KIF28PB7ZC32 967 aa15.96■□□□□ 0.15
SSR4-207ENST00000471724 TGFB3P10600 412 aa15.96■□□□□ 0.15
SSR4-207ENST00000471724 EN2P19622 333 aaPredicted RBP15.96■□□□□ 0.15
SSR4-207ENST00000471724 ICAM3P32942 547 aa15.96■□□□□ 0.15
SSR4-207ENST00000471724 GJA8P48165 433 aa15.96■□□□□ 0.15
SSR4-207ENST00000471724 ORC2Q13416 577 aaPredicted RBP15.96■□□□□ 0.15
SSR4-207ENST00000471724 PRAMEF19Q5SWL8 479 aa15.96■□□□□ 0.15
SSR4-207ENST00000471724 IQSEC1Q6DN90 963 aa15.96■□□□□ 0.15
SSR4-207ENST00000471724 TAPT1Q6NXT6 567 aa15.96■□□□□ 0.15
SSR4-207ENST00000471724 SEPT14Q6ZU15 432 aa15.96■□□□□ 0.15
SSR4-207ENST00000471724 TRPV1Q8NER1 839 aa15.96■□□□□ 0.15
SSR4-207ENST00000471724 WDR11Q9BZH6 1224 aa15.96■□□□□ 0.15
SSR4-207ENST00000471724 JADE2Q9NQC1 790 aa15.96■□□□□ 0.15
SSR4-207ENST00000471724 PAK6Q9NQU5 681 aaPredicted RBP15.96■□□□□ 0.15
SSR4-207ENST00000471724 DDX20Q9UHI6 824 aaKnown RBP15.96■□□□□ 0.15
SSR4-207ENST00000471724 MTMR6Q9Y217 621 aa15.96■□□□□ 0.15
SSR4-207ENST00000471724 IGLV3-22A0A075B6J6 115 aa15.95■□□□□ 0.14
SSR4-207ENST00000471724 FAM205CA6NFA0 338 aa15.95■□□□□ 0.14
SSR4-207ENST00000471724 RGS20O76081 388 aa15.95■□□□□ 0.14
SSR4-207ENST00000471724 RARBP10826 455 aa15.95■□□□□ 0.14
SSR4-207ENST00000471724 ITGB5P18084 799 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms