RNA–Protein interactions for RNA: ENST00000471681.5

CCDC66-213, Transcript of coiled-coil domain containing 66, humanhuman

TSL 5

Gene CCDC66, Length 3,120 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-213ENST00000471681 USP17L18D6R9N7 530 aa3.99□□□□□ -1.77
CCDC66-213ENST00000471681 USP17L22D6RA61 530 aa3.99□□□□□ -1.77
CCDC66-213ENST00000471681 USP17L17D6RBQ6 530 aa3.99□□□□□ -1.77
CCDC66-213ENST00000471681 USP17L19D6RCP7 530 aa3.99□□□□□ -1.77
CCDC66-213ENST00000471681 USP17L20D6RJB6 530 aa3.99□□□□□ -1.77
CCDC66-213ENST00000471681 MBD4O95243 580 aa3.99□□□□□ -1.77
CCDC66-213ENST00000471681 PDHBP11177 359 aa3.99□□□□□ -1.77
CCDC66-213ENST00000471681 XRCC6P12956 609 aaKnown RBP eCLIP3.99□□□□□ -1.77
CCDC66-213ENST00000471681 PDIA3P30101 505 aaKnown RBP3.99□□□□□ -1.77
CCDC66-213ENST00000471681 ADD1P35611 737 aaKnown RBP3.99□□□□□ -1.77
CCDC66-213ENST00000471681 USP11P51784 963 aa3.99□□□□□ -1.77
CCDC66-213ENST00000471681 GTF2IP78347 998 aa3.99□□□□□ -1.77
CCDC66-213ENST00000471681 USP17L24Q0WX57 530 aa3.99□□□□□ -1.77
CCDC66-213ENST00000471681 GRB14Q14449 540 aa3.99□□□□□ -1.77
CCDC66-213ENST00000471681 SNX17Q15036 470 aa3.99□□□□□ -1.77
CCDC66-213ENST00000471681 CDC37Q16543 378 aaPredicted RBP3.99□□□□□ -1.77
CCDC66-213ENST00000471681 SPRYD7Q5W111 196 aa3.99□□□□□ -1.77
CCDC66-213ENST00000471681 SAPCD2Q86UD0 394 aa3.99□□□□□ -1.77
CCDC66-213ENST00000471681 AFAP1L1Q8TED9 768 aa3.99□□□□□ -1.77
CCDC66-213ENST00000471681 SNRNP27Q8WVK2 155 aaKnown RBP3.99□□□□□ -1.77
CCDC66-213ENST00000471681 TSC1Q92574 1164 aa3.99□□□□□ -1.77
CCDC66-213ENST00000471681 ZFRQ96KR1 1074 aaKnown RBP3.99□□□□□ -1.77
CCDC66-213ENST00000471681 AGBL1Q96MI9 1066 aa3.99□□□□□ -1.77
CCDC66-213ENST00000471681 DUSP9Q99956 384 aaKnown RBP3.99□□□□□ -1.77
CCDC66-213ENST00000471681 LNPKQ9C0E8 428 aa3.99□□□□□ -1.77
CCDC66-213ENST00000471681 RSPH9Q9H1X1 276 aaPredicted RBP3.99□□□□□ -1.77
CCDC66-213ENST00000471681 IL21Q9HBE4 155 aa3.99□□□□□ -1.77
CCDC66-213ENST00000471681 MED4Q9NPJ6 270 aa3.99□□□□□ -1.77
CCDC66-213ENST00000471681 RIC8AQ9NPQ8 531 aa3.99□□□□□ -1.77
CCDC66-213ENST00000471681 SUFUQ9UMX1 484 aa3.99□□□□□ -1.77
CCDC66-213ENST00000471681 RABL2BQ9UNT1 228 aa3.99□□□□□ -1.77
CCDC66-213ENST00000471681 COL4A2P08572 1712 aa3.99□□□□□ -1.77
CCDC66-213ENST00000471681 ATP8B3O60423 1300 aa3.99□□□□□ -1.77
CCDC66-213ENST00000471681 COL1A2P08123 1366 aa3.99□□□□□ -1.77
CCDC66-213ENST00000471681 HMGB1P1B2RPK0 211 aaPredicted RBP3.99□□□□□ -1.77
CCDC66-213ENST00000471681 STRNO43815 780 aa3.99□□□□□ -1.77
CCDC66-213ENST00000471681 ICAM1P05362 532 aa3.99□□□□□ -1.77
CCDC66-213ENST00000471681 MYL1P05976 194 aa3.99□□□□□ -1.77
CCDC66-213ENST00000471681 HLA-DOAP06340 250 aa3.99□□□□□ -1.77
CCDC66-213ENST00000471681 ADRB2P07550 413 aa3.99□□□□□ -1.77
CCDC66-213ENST00000471681 COL6A1P12109 1028 aa3.99□□□□□ -1.77
CCDC66-213ENST00000471681 PKN2Q16513 984 aaKnown RBP3.99□□□□□ -1.77
CCDC66-213ENST00000471681 ARL6IP4Q66PJ3 421 aaKnown RBP3.99□□□□□ -1.77
CCDC66-213ENST00000471681 CYB5R4Q7L1T6 521 aa3.99□□□□□ -1.77
CCDC66-213ENST00000471681 KLHL23Q8NBE8 558 aa3.99□□□□□ -1.77
CCDC66-213ENST00000471681 CLEC4DQ8WXI8 215 aa3.99□□□□□ -1.77
CCDC66-213ENST00000471681 WASF1Q92558 559 aa3.99□□□□□ -1.77
CCDC66-213ENST00000471681 CLP1Q92989 425 aaKnown RBP3.99□□□□□ -1.77
CCDC66-213ENST00000471681 MROH8Q9H579 483 aa3.99□□□□□ -1.77
CCDC66-213ENST00000471681 USP40Q9NVE5 1235 aa3.99□□□□□ -1.77
CCDC66-213ENST00000471681 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.99□□□□□ -1.77
CCDC66-213ENST00000471681 ZSWIM5Q9P217 1185 aa3.99□□□□□ -1.77
CCDC66-213ENST00000471681 USP25Q9UHP3 1055 aa3.99□□□□□ -1.77
CCDC66-213ENST00000471681 LIMCH1Q9UPQ0 1083 aa3.99□□□□□ -1.77
CCDC66-213ENST00000471681 PLXNA3P51805 1871 aa3.98□□□□□ -1.77
CCDC66-213ENST00000471681 OPLAHO14841 1288 aa3.98□□□□□ -1.77
CCDC66-213ENST00000471681 CASQ1P31415 396 aa3.98□□□□□ -1.77
CCDC66-213ENST00000471681 NOP2P46087 812 aaKnown RBP3.98□□□□□ -1.77
CCDC66-213ENST00000471681 IREB2P48200 963 aaKnown RBP3.98□□□□□ -1.77
CCDC66-213ENST00000471681 RAD51AP2Q09MP3 1159 aa3.98□□□□□ -1.77
CCDC66-213ENST00000471681 PABPC4Q13310 644 aaKnown RBP eCLIP3.98□□□□□ -1.77
CCDC66-213ENST00000471681 NR6A1Q15406 480 aa3.98□□□□□ -1.77
CCDC66-213ENST00000471681 ZNF792Q3KQV3 632 aa3.98□□□□□ -1.77
CCDC66-213ENST00000471681 NT5DC1Q5TFE4 455 aa3.98□□□□□ -1.77
CCDC66-213ENST00000471681 KCNV1Q6PIU1 500 aa3.98□□□□□ -1.77
CCDC66-213ENST00000471681 APOA5Q6Q788 366 aa3.98□□□□□ -1.77
CCDC66-213ENST00000471681 SMIM5Q71RC9 77 aa3.98□□□□□ -1.77
CCDC66-213ENST00000471681 CRACR2BQ8N4Y2 399 aaPredicted RBP3.98□□□□□ -1.77
CCDC66-213ENST00000471681 UHMK1Q8TAS1 419 aaKnown RBP3.98□□□□□ -1.77
CCDC66-213ENST00000471681 SPATA20Q8TB22 786 aa3.98□□□□□ -1.77
CCDC66-213ENST00000471681 LRCH3Q96II8 777 aa3.98□□□□□ -1.77
CCDC66-213ENST00000471681 FGD4Q96M96 766 aa3.98□□□□□ -1.77
CCDC66-213ENST00000471681 INO80BQ9C086 356 aaPredicted RBP3.98□□□□□ -1.77
CCDC66-213ENST00000471681 RETREG1Q9H6L5 497 aa3.98□□□□□ -1.77
CCDC66-213ENST00000471681 MAGEF1Q9HAY2 307 aa3.98□□□□□ -1.77
CCDC66-213ENST00000471681 ANO2Q9NQ90 1003 aa3.98□□□□□ -1.77
CCDC66-213ENST00000471681 BARHL2Q9NY43 387 aa3.98□□□□□ -1.77
CCDC66-213ENST00000471681 KIAA1468Q9P260 1216 aa3.98□□□□□ -1.77
CCDC66-213ENST00000471681 ABCF2Q9UG63 623 aa3.98□□□□□ -1.77
CCDC66-213ENST00000471681 PPP1R9AQ9ULJ8 1098 aa3.98□□□□□ -1.77
CCDC66-213ENST00000471681 SQORQ9Y6N5 450 aa3.98□□□□□ -1.77
CCDC66-213ENST00000471681 FAM196BA6NMK8 535 aa3.98□□□□□ -1.77
CCDC66-213ENST00000471681 CFAP99D6REC4 459 aa3.98□□□□□ -1.77
CCDC66-213ENST00000471681 C3orf80F5H4A9 247 aa3.98□□□□□ -1.77
CCDC66-213ENST00000471681 ZNF213O14771 459 aa3.98□□□□□ -1.77
CCDC66-213ENST00000471681 NKRFO15226 690 aaKnown RBP eCLIP3.98□□□□□ -1.77
CCDC66-213ENST00000471681 TIMM44O43615 452 aa3.98□□□□□ -1.77
CCDC66-213ENST00000471681 LGR5O75473 907 aa3.98□□□□□ -1.77
CCDC66-213ENST00000471681 CDKL5O76039 1030 aa3.98□□□□□ -1.77
CCDC66-213ENST00000471681 BMP15O95972 392 aa3.98□□□□□ -1.77
CCDC66-213ENST00000471681 MAPTP10636 758 aaKnown RBP3.98□□□□□ -1.77
CCDC66-213ENST00000471681 CETPP11597 493 aa3.98□□□□□ -1.77
CCDC66-213ENST00000471681 GCFC2P16383 781 aaKnown RBP3.98□□□□□ -1.77
CCDC66-213ENST00000471681 PLCD1P51178 756 aa3.98□□□□□ -1.77
CCDC66-213ENST00000471681 RTP1P59025 263 aa3.98□□□□□ -1.77
CCDC66-213ENST00000471681 PTK7Q13308 1070 aa3.98□□□□□ -1.77
CCDC66-213ENST00000471681 PCBP1Q15365 356 aaKnown RBP eCLIP3.98□□□□□ -1.77
CCDC66-213ENST00000471681 FAM110CQ1W6H9 321 aa3.98□□□□□ -1.77
CCDC66-213ENST00000471681 SWT1Q5T5J6 900 aaKnown RBP3.98□□□□□ -1.77
CCDC66-213ENST00000471681 LARP1BQ659C4 914 aaKnown RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms