RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 TRIM9Q9C026 710 aa7.21□□□□□ -1.25
SPEN-204ENST00000471538 TMX4Q9H1E5 349 aaPredicted RBP7.21□□□□□ -1.25
SPEN-204ENST00000471538 GPCPD1Q9NPB8 672 aa7.21□□□□□ -1.25
SPEN-204ENST00000471538 BLOC1S4Q9NUP1 217 aa7.21□□□□□ -1.25
SPEN-204ENST00000471538 PI4KBQ9UBF8 816 aa7.21□□□□□ -1.25
SPEN-204ENST00000471538 PHLPP2Q6ZVD8 1323 aa7.21□□□□□ -1.26
SPEN-204ENST00000471538 MYH7BA7E2Y1 1941 aa7.21□□□□□ -1.26
SPEN-204ENST00000471538 YDJCA8MPS7 323 aa7.2□□□□□ -1.26
SPEN-204ENST00000471538 USP17L10C9JJH3 530 aa7.2□□□□□ -1.26
SPEN-204ENST00000471538 AKR1B15C9JRZ8 316 aaPredicted RBP7.2□□□□□ -1.26
SPEN-204ENST00000471538 H7C1D1 291 aa7.2□□□□□ -1.26
SPEN-204ENST00000471538 MFAP3LO75121 409 aa7.2□□□□□ -1.26
SPEN-204ENST00000471538 COBLO75128 1261 aa7.2□□□□□ -1.26
SPEN-204ENST00000471538 TDP2O95551 362 aa7.2□□□□□ -1.26
SPEN-204ENST00000471538 GYPCP04921 128 aa7.2□□□□□ -1.26
SPEN-204ENST00000471538 EEF2P13639 858 aaKnown RBP7.2□□□□□ -1.26
SPEN-204ENST00000471538 TECP42680 631 aa7.2□□□□□ -1.26
SPEN-204ENST00000471538 COPB1P53618 953 aaKnown RBP7.2□□□□□ -1.26
SPEN-204ENST00000471538 PMS1P54277 932 aaKnown RBP7.2□□□□□ -1.26
SPEN-204ENST00000471538 CACNB3P54284 484 aa7.2□□□□□ -1.26
SPEN-204ENST00000471538 ETF1P62495 437 aaKnown RBP7.2□□□□□ -1.26
SPEN-204ENST00000471538 RBL2Q08999 1139 aa7.2□□□□□ -1.26
SPEN-204ENST00000471538 GRB10Q13322 594 aa7.2□□□□□ -1.26
SPEN-204ENST00000471538 AOC3Q16853 763 aa7.2□□□□□ -1.26
SPEN-204ENST00000471538 TMEM119Q4V9L6 283 aa7.2□□□□□ -1.26
SPEN-204ENST00000471538 TCP11X2Q5H9J9 407 aa7.2□□□□□ -1.26
SPEN-204ENST00000471538 PPP1R15BQ5SWA1 713 aa7.2□□□□□ -1.26
SPEN-204ENST00000471538 TTI2Q6NXR4 508 aa7.2□□□□□ -1.26
SPEN-204ENST00000471538 CNNM4Q6P4Q7 775 aa7.2□□□□□ -1.26
SPEN-204ENST00000471538 DCAF4Q8WV16 495 aa7.2□□□□□ -1.26
SPEN-204ENST00000471538 MBOAT7Q96N66 472 aa7.2□□□□□ -1.26
SPEN-204ENST00000471538 CRISPLD2Q9H0B8 497 aa7.2□□□□□ -1.26
SPEN-204ENST00000471538 PRDM10Q9NQV6 1147 aa7.2□□□□□ -1.26
SPEN-204ENST00000471538 PPP2R2CQ9Y2T4 447 aa7.2□□□□□ -1.26
SPEN-204ENST00000471538 CNTNAP1P78357 1384 aa7.2□□□□□ -1.26
SPEN-204ENST00000471538 COL4A5P29400 1685 aa7.2□□□□□ -1.26
SPEN-204ENST00000471538 TRIM49BA6NDI0 452 aa7.19□□□□□ -1.26
SPEN-204ENST00000471538 FAM196BA6NMK8 535 aa7.19□□□□□ -1.26
SPEN-204ENST00000471538 KCNJ18B7U540 433 aa7.19□□□□□ -1.26
SPEN-204ENST00000471538 ZSCAN12O43309 604 aa7.19□□□□□ -1.26
SPEN-204ENST00000471538 ENTPD3O75355 529 aa7.19□□□□□ -1.26
SPEN-204ENST00000471538 SLC16A2P36021 539 aa7.19□□□□□ -1.26
SPEN-204ENST00000471538 VEGFBP49765 207 aa7.19□□□□□ -1.26
SPEN-204ENST00000471538 FXR1P51114 621 aaKnown RBP eCLIP7.19□□□□□ -1.26
SPEN-204ENST00000471538 JAG1P78504 1218 aa7.19□□□□□ -1.26
SPEN-204ENST00000471538 KCNJ12Q14500 433 aa7.19□□□□□ -1.26
SPEN-204ENST00000471538 PDIA5Q14554 519 aa7.19□□□□□ -1.26
SPEN-204ENST00000471538 RRP1BQ14684 758 aaKnown RBP7.19□□□□□ -1.26
SPEN-204ENST00000471538 CALCRLQ16602 461 aa7.19□□□□□ -1.26
SPEN-204ENST00000471538 UBE2SQ16763 222 aa7.19□□□□□ -1.26
SPEN-204ENST00000471538 CCDC96Q2M329 555 aa7.19□□□□□ -1.26
SPEN-204ENST00000471538 QRICH1Q2TAL8 776 aa7.19□□□□□ -1.26
SPEN-204ENST00000471538 CERKLQ49MI3 558 aaPredicted RBP7.19□□□□□ -1.26
SPEN-204ENST00000471538 FILIP1LQ4L180 1135 aa7.19□□□□□ -1.26
SPEN-204ENST00000471538 HYIQ5T013 277 aa7.19□□□□□ -1.26
SPEN-204ENST00000471538 RAD9BQ6WBX8 426 aa7.19□□□□□ -1.26
SPEN-204ENST00000471538 SYT10Q6XYQ8 523 aa7.19□□□□□ -1.26
SPEN-204ENST00000471538 TOGARAM2Q6ZUX3 1019 aa7.19□□□□□ -1.26
SPEN-204ENST00000471538 TMEM179Q6ZVK1 233 aa7.19□□□□□ -1.26
SPEN-204ENST00000471538 KCTD1Q719H9 257 aa7.19□□□□□ -1.26
SPEN-204ENST00000471538 GMCL1P1Q8NEA9 526 aa7.19□□□□□ -1.26
SPEN-204ENST00000471538 ZNF507Q8TCN5 953 aa7.19□□□□□ -1.26
SPEN-204ENST00000471538 CRYGNQ8WXF5 182 aa7.19□□□□□ -1.26
SPEN-204ENST00000471538 ZNF592Q92610 1267 aa7.19□□□□□ -1.26
SPEN-204ENST00000471538 HAS1Q92839 578 aa7.19□□□□□ -1.26
SPEN-204ENST00000471538 CUL5Q93034 780 aa7.19□□□□□ -1.26
SPEN-204ENST00000471538 CCDC51Q96ER9 411 aa7.19□□□□□ -1.26
SPEN-204ENST00000471538 DHTKD1Q96HY7 919 aaPredicted RBP7.19□□□□□ -1.26
SPEN-204ENST00000471538 GMCL1Q96IK5 515 aa7.19□□□□□ -1.26
SPEN-204ENST00000471538 PLIN2Q99541 437 aa7.19□□□□□ -1.26
SPEN-204ENST00000471538 DUSP9Q99956 384 aaKnown RBP7.19□□□□□ -1.26
SPEN-204ENST00000471538 NAA15Q9BXJ9 866 aaKnown RBP7.19□□□□□ -1.26
SPEN-204ENST00000471538 THAP9Q9H5L6 903 aa7.19□□□□□ -1.26
SPEN-204ENST00000471538 KANSL2Q9H9L4 492 aa7.19□□□□□ -1.26
SPEN-204ENST00000471538 STK17AQ9UEE5 414 aa7.19□□□□□ -1.26
SPEN-204ENST00000471538 PASKQ96RG2 1323 aa7.19□□□□□ -1.26
SPEN-204ENST00000471538 CYP3A7-CYP3A51PA0A087WV96 503 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 A0A1W2PQC6 194 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 GOLGA6L9A6NEM1 432 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 MYMKA6NI61 221 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 LGALS16A8MUM7 142 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 MPHOSPH10O00566 681 aaKnown RBP7.18□□□□□ -1.26
SPEN-204ENST00000471538 SLU7O95391 586 aaKnown RBP7.18□□□□□ -1.26
SPEN-204ENST00000471538 HSPA8P11142 646 aaKnown RBP7.18□□□□□ -1.26
SPEN-204ENST00000471538 GCFC2P16383 781 aaKnown RBP7.18□□□□□ -1.26
SPEN-204ENST00000471538 CYP3A7P24462 503 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 CCNE1P24864 410 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 EEF1GP26641 437 aaKnown RBP7.18□□□□□ -1.26
SPEN-204ENST00000471538 CCT6AP40227 531 aaKnown RBP7.18□□□□□ -1.26
SPEN-204ENST00000471538 PPP1R2P41236 205 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 TXKP42681 527 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 TNNI2P48788 182 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 MMP14P50281 582 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 MRPL12P52815 198 aaKnown RBP7.18□□□□□ -1.26
SPEN-204ENST00000471538 LBX1P52954 281 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 EHHADHQ08426 723 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 TCP10Q12799 353 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 STK4Q13043 487 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 TRIM14Q14142 442 aa7.18□□□□□ -1.26
SPEN-204ENST00000471538 MTF1Q14872 753 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms