RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 MYADML2A6NDP7 307 aa20.32■□□□□ 0.84
VPS72-204ENST00000471423 ARIH2O95376 493 aa20.32■□□□□ 0.84
VPS72-204ENST00000471423 DUSP28Q4G0W2 176 aa20.32■□□□□ 0.84
VPS72-204ENST00000471423 NECAB2Q7Z6G3 386 aa20.32■□□□□ 0.84
VPS72-204ENST00000471423 RNF180Q86T96 592 aa20.32■□□□□ 0.84
VPS72-204ENST00000471423 TEX2Q8IWB9 1127 aa20.32■□□□□ 0.84
VPS72-204ENST00000471423 CCDC83Q8IWF9 413 aa20.32■□□□□ 0.84
VPS72-204ENST00000471423 NSUN7Q8NE18 718 aaKnown RBP20.32■□□□□ 0.84
VPS72-204ENST00000471423 PGBD1Q96JS3 809 aa20.32■□□□□ 0.84
VPS72-204ENST00000471423 UPF3AQ9H1J1 476 aaKnown RBP20.32■□□□□ 0.84
VPS72-204ENST00000471423 C11orf49Q9H6J7 331 aa20.32■□□□□ 0.84
VPS72-204ENST00000471423 C6orf50Q9HD87 102 aa20.32■□□□□ 0.84
VPS72-204ENST00000471423 SH3GLB2Q9NR46 395 aa20.32■□□□□ 0.84
VPS72-204ENST00000471423 TMEM260Q9NX78 707 aa20.32■□□□□ 0.84
VPS72-204ENST00000471423 ADAMTS3O15072 1205 aa20.31■□□□□ 0.84
VPS72-204ENST00000471423 RGS20O76081 388 aa20.31■□□□□ 0.84
VPS72-204ENST00000471423 CD2BP2O95400 341 aaKnown RBP20.31■□□□□ 0.84
VPS72-204ENST00000471423 C6orf222P0C671 652 aaPredicted RBP20.31■□□□□ 0.84
VPS72-204ENST00000471423 TXNP10599 105 aaKnown RBP20.31■□□□□ 0.84
VPS72-204ENST00000471423 CLK2P49760 499 aaKnown RBP20.31■□□□□ 0.84
VPS72-204ENST00000471423 GJA9P57773 515 aa20.31■□□□□ 0.84
VPS72-204ENST00000471423 MRPS9P82933 396 aaKnown RBP20.31■□□□□ 0.84
VPS72-204ENST00000471423 TTLL4Q14679 1199 aa20.31■□□□□ 0.84
VPS72-204ENST00000471423 PCNX4Q63HM2 1172 aa20.31■□□□□ 0.84
VPS72-204ENST00000471423 ZSCAN31Q96LW9 406 aaPredicted RBP20.31■□□□□ 0.84
VPS72-204ENST00000471423 ANO3Q9BYT9 981 aa20.31■□□□□ 0.84
VPS72-204ENST00000471423 SPC25Q9HBM1 224 aa20.31■□□□□ 0.84
VPS72-204ENST00000471423 ORC3Q9UBD5 711 aaPredicted RBP20.31■□□□□ 0.84
VPS72-204ENST00000471423 JAK2O60674 1132 aa20.3■□□□□ 0.84
VPS72-204ENST00000471423 FOSP01100 380 aaPredicted RBP20.3■□□□□ 0.84
VPS72-204ENST00000471423 COL6A1P12109 1028 aa20.3■□□□□ 0.84
VPS72-204ENST00000471423 GNA11P29992 359 aa20.3■□□□□ 0.84
VPS72-204ENST00000471423 NLRP5P59047 1200 aa20.3■□□□□ 0.84
VPS72-204ENST00000471423 AP3B2Q13367 1082 aa20.3■□□□□ 0.84
VPS72-204ENST00000471423 JAKMIP3Q5VZ66 844 aa20.3■□□□□ 0.84
VPS72-204ENST00000471423 REXO1Q8N1G1 1221 aaKnown RBP20.3■□□□□ 0.84
VPS72-204ENST00000471423 COPS5Q92905 334 aa20.3■□□□□ 0.84
VPS72-204ENST00000471423 AP5M1Q9H0R1 490 aa20.3■□□□□ 0.84
VPS72-204ENST00000471423 EHMT1Q9H9B1 1298 aa20.3■□□□□ 0.84
VPS72-204ENST00000471423 SH2B1Q9NRF2 756 aaPredicted RBP20.3■□□□□ 0.84
VPS72-204ENST00000471423 MRVI1Q9Y6F6 885 aa20.3■□□□□ 0.84
VPS72-204ENST00000471423 CTAGE5O15320 804 aa20.29■□□□□ 0.84
VPS72-204ENST00000471423 DYNC1LI2O43237 492 aaPredicted RBP20.29■□□□□ 0.84
VPS72-204ENST00000471423 FDPSP14324 419 aaKnown RBP20.29■□□□□ 0.84
VPS72-204ENST00000471423 CST5P28325 142 aaPredicted RBP20.29■□□□□ 0.84
VPS72-204ENST00000471423 LY6KQ17RY6 165 aa20.29■□□□□ 0.84
VPS72-204ENST00000471423 CCDC62Q6P9F0 684 aa20.29■□□□□ 0.84
VPS72-204ENST00000471423 KLHDC9Q8NEP7 349 aa20.29■□□□□ 0.84
VPS72-204ENST00000471423 BICD2Q8TD16 824 aa20.29■□□□□ 0.84
VPS72-204ENST00000471423 RASGRP4Q8TDF6 673 aa20.29■□□□□ 0.84
VPS72-204ENST00000471423 INPP4AQ96PE3 977 aaPredicted RBP20.29■□□□□ 0.84
VPS72-204ENST00000471423 RTEL1Q9NZ71 1219 aa20.29■□□□□ 0.84
VPS72-204ENST00000471423 Q9Y3F1 56 aa20.29■□□□□ 0.84
VPS72-204ENST00000471423 NKRFO15226 690 aaKnown RBP eCLIP20.28■□□□□ 0.84
VPS72-204ENST00000471423 STAM2O75886 525 aa20.28■□□□□ 0.84
VPS72-204ENST00000471423 BEX3Q00994 111 aa20.28■□□□□ 0.84
VPS72-204ENST00000471423 XRRA1Q6P2D8 792 aa20.28■□□□□ 0.84
VPS72-204ENST00000471423 IL27Q8NEV9 243 aa20.28■□□□□ 0.84
VPS72-204ENST00000471423 OR6J1Q8NGC5 347 aa20.28■□□□□ 0.84
VPS72-204ENST00000471423 ALG1Q9BT22 464 aa20.28■□□□□ 0.84
VPS72-204ENST00000471423 SENP6Q9GZR1 1112 aaPredicted RBP20.28■□□□□ 0.84
VPS72-204ENST00000471423 NKX3-2P78367 333 aa20.27■□□□□ 0.84
VPS72-204ENST00000471423 KCNA10Q16322 511 aa20.27■□□□□ 0.84
VPS72-204ENST00000471423 FSCN1Q16658 493 aaKnown RBP20.27■□□□□ 0.84
VPS72-204ENST00000471423 GNPTABQ3T906 1256 aa20.27■□□□□ 0.84
VPS72-204ENST00000471423 GNASQ5JWF2 1037 aa20.27■□□□□ 0.84
VPS72-204ENST00000471423 CCSAPQ6IQ19 270 aaPredicted RBP20.27■□□□□ 0.84
VPS72-204ENST00000471423 WASF1Q92558 559 aa20.27■□□□□ 0.84
VPS72-204ENST00000471423 FERMT2Q96AC1 680 aa20.27■□□□□ 0.84
VPS72-204ENST00000471423 HTATIP2Q9BUP3 242 aa20.27■□□□□ 0.84
VPS72-204ENST00000471423 GJB4Q9NTQ9 266 aa20.27■□□□□ 0.84
VPS72-204ENST00000471423 DDX41Q9UJV9 622 aaKnown RBP20.27■□□□□ 0.84
VPS72-204ENST00000471423 PCDHA4Q9UN74 947 aa20.27■□□□□ 0.84
VPS72-204ENST00000471423 KCNJ14Q9UNX9 436 aa20.27■□□□□ 0.84
VPS72-204ENST00000471423 PHF24Q9UPV7 400 aa20.27■□□□□ 0.84
VPS72-204ENST00000471423 TNRC18O15417 2968 aaPredicted RBP20.27■□□□□ 0.83
VPS72-204ENST00000471423 XBP1P17861 261 aa20.26■□□□□ 0.83
VPS72-204ENST00000471423 SREBF1P36956 1147 aa20.26■□□□□ 0.83
VPS72-204ENST00000471423 FAM177A1Q8N128 213 aaPredicted RBP20.26■□□□□ 0.83
VPS72-204ENST00000471423 PCSK9Q8NBP7 692 aaKnown RBP20.26■□□□□ 0.83
VPS72-204ENST00000471423 TSEN34Q9BSV6 310 aaKnown RBP20.26■□□□□ 0.83
VPS72-204ENST00000471423 A0A1W2PQ45 241 aaPredicted RBP20.25■□□□□ 0.83
VPS72-204ENST00000471423 A0A1W2PQY0 241 aa20.25■□□□□ 0.83
VPS72-204ENST00000471423 MOXD2PA6NHM9 499 aa20.25■□□□□ 0.83
VPS72-204ENST00000471423 GH1P01241 217 aa20.25■□□□□ 0.83
VPS72-204ENST00000471423 ASGR1P07306 291 aa20.25■□□□□ 0.83
VPS72-204ENST00000471423 UBA1P22314 1058 aaKnown RBP20.25■□□□□ 0.83
VPS72-204ENST00000471423 ACLYP53396 1101 aa20.25■□□□□ 0.83
VPS72-204ENST00000471423 ARHGAP1Q07960 439 aa20.25■□□□□ 0.83
VPS72-204ENST00000471423 SEMA3FQ13275 785 aa20.25■□□□□ 0.83
VPS72-204ENST00000471423 NPY5RQ15761 445 aa20.25■□□□□ 0.83
VPS72-204ENST00000471423 MCTP2Q6DN12 878 aa20.25■□□□□ 0.83
VPS72-204ENST00000471423 KCNV1Q6PIU1 500 aa20.25■□□□□ 0.83
VPS72-204ENST00000471423 DAGLBQ8NCG7 672 aa20.25■□□□□ 0.83
VPS72-204ENST00000471423 TMX3Q96JJ7 454 aa20.25■□□□□ 0.83
VPS72-204ENST00000471423 LLPHQ9BRT6 129 aaKnown RBP20.25■□□□□ 0.83
VPS72-204ENST00000471423 PHF20Q9BVI0 1012 aa20.25■□□□□ 0.83
VPS72-204ENST00000471423 ALPK3Q96L96 1907 aa20.25■□□□□ 0.83
VPS72-204ENST00000471423 FIBPO43427 364 aa20.24■□□□□ 0.83
VPS72-204ENST00000471423 SORBS3O60504 671 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms