RNA–Protein interactions for RNA: ENST00000471143.5

TSC2-212, Transcript of TSC complex subunit 2, humanhuman

TSL 4

Gene TSC2, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-212ENST00000471143 TCEANC2Q96MN5 208 aa13.88□□□□□ -0.19
TSC2-212ENST00000471143 ALDH8A1Q9H2A2 487 aaPredicted RBP13.88□□□□□ -0.19
TSC2-212ENST00000471143 BRPF3Q9ULD4 1205 aa13.88□□□□□ -0.19
TSC2-212ENST00000471143 LAMA2P24043 3122 aaKnown RBP13.88□□□□□ -0.19
TSC2-212ENST00000471143 MEIS2O14770 477 aa13.87□□□□□ -0.19
TSC2-212ENST00000471143 HMGB1P09429 215 aaKnown RBP13.87□□□□□ -0.19
TSC2-212ENST00000471143 CYP2C18P33260 490 aa13.87□□□□□ -0.19
TSC2-212ENST00000471143 HSPA4P34932 840 aa13.87□□□□□ -0.19
TSC2-212ENST00000471143 NBPF20Q3BBV1 942 aa13.87□□□□□ -0.19
TSC2-212ENST00000471143 TMTC3Q6ZXV5 915 aa13.87□□□□□ -0.19
TSC2-212ENST00000471143 EMID1Q96A84 441 aaPredicted RBP13.87□□□□□ -0.19
TSC2-212ENST00000471143 ZFP91Q96JP5 570 aaPredicted RBP13.87□□□□□ -0.19
TSC2-212ENST00000471143 PPP1R12CQ9BZL4 782 aa13.87□□□□□ -0.19
TSC2-212ENST00000471143 SEC63Q9UGP8 760 aaKnown RBP13.87□□□□□ -0.19
TSC2-212ENST00000471143 MRVI1Q9Y6F6 885 aa13.87□□□□□ -0.19
TSC2-212ENST00000471143 hCG_1642624A0A1W2PR95 340 aa13.86□□□□□ -0.19
TSC2-212ENST00000471143 PIK3CDO00329 1044 aa13.86□□□□□ -0.19
TSC2-212ENST00000471143 SUPT20HL2P0C7V6 817 aa13.86□□□□□ -0.19
TSC2-212ENST00000471143 TGFB3P10600 412 aa13.86□□□□□ -0.19
TSC2-212ENST00000471143 CSF2RAP15509 400 aa13.86□□□□□ -0.19
TSC2-212ENST00000471143 CCND2P30279 289 aa13.86□□□□□ -0.19
TSC2-212ENST00000471143 MRPS9P82933 396 aaKnown RBP13.86□□□□□ -0.19
TSC2-212ENST00000471143 SP2Q02086 613 aa13.86□□□□□ -0.19
TSC2-212ENST00000471143 LAMC2Q13753 1193 aa13.86□□□□□ -0.19
TSC2-212ENST00000471143 KCNV1Q6PIU1 500 aa13.86□□□□□ -0.19
TSC2-212ENST00000471143 USP17L6PQ6QN14 398 aa13.86□□□□□ -0.19
TSC2-212ENST00000471143 MICU3Q86XE3 530 aa13.86□□□□□ -0.19
TSC2-212ENST00000471143 DHX37Q8IY37 1157 aaKnown RBP13.86□□□□□ -0.19
TSC2-212ENST00000471143 TMEM199Q8N511 208 aa13.86□□□□□ -0.19
TSC2-212ENST00000471143 DEFB123Q8N688 67 aa13.86□□□□□ -0.19
TSC2-212ENST00000471143 HIPK3Q9H422 1215 aa13.86□□□□□ -0.19
TSC2-212ENST00000471143 SNX14Q9Y5W7 946 aa13.86□□□□□ -0.19
TSC2-212ENST00000471143 MCM3APO60318 1980 aa13.85□□□□□ -0.19
TSC2-212ENST00000471143 MMP3P08254 477 aa13.85□□□□□ -0.19
TSC2-212ENST00000471143 CPA1P15085 419 aa13.85□□□□□ -0.19
TSC2-212ENST00000471143 CASTP20810 708 aaKnown RBP13.85□□□□□ -0.19
TSC2-212ENST00000471143 FUT2Q10981 343 aa13.85□□□□□ -0.19
TSC2-212ENST00000471143 PPIGQ13427 754 aaKnown RBP eCLIP13.85□□□□□ -0.197e-7■■■■□ 22.8
TSC2-212ENST00000471143 CELF3Q5SZQ8 465 aaKnown RBP13.85□□□□□ -0.19
TSC2-212ENST00000471143 MYSM1Q5VVJ2 828 aa13.85□□□□□ -0.19
TSC2-212ENST00000471143 ERICH6BQ5W0A0 696 aa13.85□□□□□ -0.19
TSC2-212ENST00000471143 NFRKBQ6P4R8 1299 aa13.85□□□□□ -0.19
TSC2-212ENST00000471143 Q7L0L9 218 aa13.85□□□□□ -0.19
TSC2-212ENST00000471143 SMARCC2Q8TAQ2 1214 aa13.85□□□□□ -0.19
TSC2-212ENST00000471143 PPP1R13LQ8WUF5 828 aa13.85□□□□□ -0.19
TSC2-212ENST00000471143 KAT2BQ92831 832 aa13.85□□□□□ -0.19
TSC2-212ENST00000471143 CUL5Q93034 780 aa13.85□□□□□ -0.19
TSC2-212ENST00000471143 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.85□□□□□ -0.194e-7■■□□□ 13.2
TSC2-212ENST00000471143 NOC4LQ9BVI4 516 aaKnown RBP13.85□□□□□ -0.19
TSC2-212ENST00000471143 PSTPIP2Q9H939 334 aa13.85□□□□□ -0.19
TSC2-212ENST00000471143 FAM217BQ9NTX9 383 aaPredicted RBP13.85□□□□□ -0.19
TSC2-212ENST00000471143 TRMT13Q9NUP7 481 aaKnown RBP13.85□□□□□ -0.19
TSC2-212ENST00000471143 PPP4R2Q9NY27 417 aa13.85□□□□□ -0.19
TSC2-212ENST00000471143 LCTP09848 1927 aa13.85□□□□□ -0.19
TSC2-212ENST00000471143 FRMPD4Q14CM0 1322 aa13.85□□□□□ -0.19
TSC2-212ENST00000471143 UMODL1Q5DID0 1318 aa13.85□□□□□ -0.19
TSC2-212ENST00000471143 ZBTB43O43298 467 aa13.84□□□□□ -0.19
TSC2-212ENST00000471143 REC8O95072 547 aa13.84□□□□□ -0.19
TSC2-212ENST00000471143 CYP2C9P11712 490 aa13.84□□□□□ -0.19
TSC2-212ENST00000471143 PTPN11Q06124 597 aaPredicted RBP13.84□□□□□ -0.19
TSC2-212ENST00000471143 DGKDQ16760 1214 aa13.84□□□□□ -0.19
TSC2-212ENST00000471143 TMEM240Q5SV17 173 aa13.84□□□□□ -0.19
TSC2-212ENST00000471143 FAM109BQ6ICB4 259 aaPredicted RBP13.84□□□□□ -0.19
TSC2-212ENST00000471143 PPTC7Q8NI37 304 aa13.84□□□□□ -0.19
TSC2-212ENST00000471143 GPKOWQ92917 476 aaPredicted RBP eCLIP13.84□□□□□ -0.19
TSC2-212ENST00000471143 RNPC3Q96LT9 517 aaKnown RBP13.84□□□□□ -0.19
TSC2-212ENST00000471143 JAKMIP1Q96N16 626 aaKnown RBP13.84□□□□□ -0.19
TSC2-212ENST00000471143 INPP4AQ96PE3 977 aaPredicted RBP13.84□□□□□ -0.19
TSC2-212ENST00000471143 RBM28Q9NW13 759 aaKnown RBP13.84□□□□□ -0.19
TSC2-212ENST00000471143 MTMR10Q9NXD2 777 aa13.84□□□□□ -0.19
TSC2-212ENST00000471143 RTEL1Q9NZ71 1219 aa13.84□□□□□ -0.19
TSC2-212ENST00000471143 V9GY48 417 aaPredicted RBP13.84□□□□□ -0.19
TSC2-212ENST00000471143 KLF18A0A0U1RQI7 1052 aa13.83□□□□□ -0.2
TSC2-212ENST00000471143 SPATA31C2B4DYI2 1134 aa13.83□□□□□ -0.2
TSC2-212ENST00000471143 PPFIA4O75335 1185 aa13.83□□□□□ -0.2
TSC2-212ENST00000471143 STAM2O75886 525 aa13.83□□□□□ -0.2
TSC2-212ENST00000471143 GGPS1O95749 300 aa13.83□□□□□ -0.2
TSC2-212ENST00000471143 ACRP10323 421 aa13.83□□□□□ -0.2
TSC2-212ENST00000471143 CDC27P30260 824 aa13.83□□□□□ -0.2
TSC2-212ENST00000471143 ICAM3P32942 547 aa13.83□□□□□ -0.2
TSC2-212ENST00000471143 CCL23P55773 120 aa13.83□□□□□ -0.2
TSC2-212ENST00000471143 SMAD3P84022 425 aaKnown RBP13.83□□□□□ -0.2
TSC2-212ENST00000471143 RTN1Q16799 776 aa13.83□□□□□ -0.2
TSC2-212ENST00000471143 HSDL1Q3SXM5 330 aa13.83□□□□□ -0.2
TSC2-212ENST00000471143 FAM47CQ5HY64 1035 aa13.83□□□□□ -0.2
TSC2-212ENST00000471143 ZNF365Q70YC5 407 aa13.83□□□□□ -0.2
TSC2-212ENST00000471143 WNT8AQ9H1J5 351 aa13.83□□□□□ -0.2
TSC2-212ENST00000471143 BCAS3Q9H6U6 928 aa13.83□□□□□ -0.2
TSC2-212ENST00000471143 IL23AQ9NPF7 189 aa13.83□□□□□ -0.2
TSC2-212ENST00000471143 EPB41L2O43491 1005 aaKnown RBP13.82□□□□□ -0.2
TSC2-212ENST00000471143 HOXD8P13378 290 aaPredicted RBP13.82□□□□□ -0.2
TSC2-212ENST00000471143 ADD1P35611 737 aaKnown RBP13.82□□□□□ -0.2
TSC2-212ENST00000471143 RCAN1P53805 252 aa13.82□□□□□ -0.2
TSC2-212ENST00000471143 CHMP4BP1P59074 171 aa13.82□□□□□ -0.2
TSC2-212ENST00000471143 SEMA3FQ13275 785 aa13.82□□□□□ -0.2
TSC2-212ENST00000471143 GNPTABQ3T906 1256 aa13.82□□□□□ -0.2
TSC2-212ENST00000471143 RASIP1Q5U651 963 aa13.82□□□□□ -0.2
TSC2-212ENST00000471143 PCNX4Q63HM2 1172 aa13.82□□□□□ -0.2
TSC2-212ENST00000471143 XRRA1Q6P2D8 792 aa13.82□□□□□ -0.2
TSC2-212ENST00000471143 BLOC1S2Q6QNY1 142 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms