RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 CCAR1Q8IX12 1150 aaKnown RBP6.48□□□□□ -1.37
HDAC8-216ENST00000470998 DEPDC4Q8N2C3 294 aa6.48□□□□□ -1.37
HDAC8-216ENST00000470998 FSIP1Q8NA03 581 aa6.48□□□□□ -1.37
HDAC8-216ENST00000470998 FANCBQ8NB91 859 aa6.48□□□□□ -1.37
HDAC8-216ENST00000470998 RNF214Q8ND24 703 aa6.48□□□□□ -1.37
HDAC8-216ENST00000470998 ENGASEQ8NFI3 743 aa6.48□□□□□ -1.37
HDAC8-216ENST00000470998 RNF217Q8TC41 542 aa6.48□□□□□ -1.37
HDAC8-216ENST00000470998 ADAMTS19Q8TE59 1207 aa6.48□□□□□ -1.37
HDAC8-216ENST00000470998 CLMNQ96JQ2 1002 aa6.48□□□□□ -1.37
HDAC8-216ENST00000470998 PGBD1Q96JS3 809 aa6.48□□□□□ -1.37
HDAC8-216ENST00000470998 ZSCAN10Q96SZ4 725 aaPredicted RBP6.48□□□□□ -1.37
HDAC8-216ENST00000470998 ZNF341Q9BYN7 854 aa6.48□□□□□ -1.37
HDAC8-216ENST00000470998 TMEM39BQ9GZU3 492 aa6.48□□□□□ -1.37
HDAC8-216ENST00000470998 ELP3Q9H9T3 547 aa6.48□□□□□ -1.37
HDAC8-216ENST00000470998 ZFYVE28Q9HCC9 887 aa6.48□□□□□ -1.37
HDAC8-216ENST00000470998 TOMM22Q9NS69 142 aa6.48□□□□□ -1.37
HDAC8-216ENST00000470998 NXF1Q9UBU9 619 aaKnown RBP6.48□□□□□ -1.37
HDAC8-216ENST00000470998 FZD1Q9UP38 647 aa6.48□□□□□ -1.37
HDAC8-216ENST00000470998 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.48□□□□□ -1.37
HDAC8-216ENST00000470998 A0A1B0GUL6 1792 aa6.48□□□□□ -1.37
HDAC8-216ENST00000470998 MYH7P12883 1935 aa6.48□□□□□ -1.37
HDAC8-216ENST00000470998 CCL15-CCL14A0A0B4J2E2 113 aa6.47□□□□□ -1.37
HDAC8-216ENST00000470998 GOLGA6L19H0YKK7 550 aa6.47□□□□□ -1.37
HDAC8-216ENST00000470998 ATP9BO43861 1147 aa6.47□□□□□ -1.37
HDAC8-216ENST00000470998 ENTPD3O75355 529 aa6.47□□□□□ -1.37
HDAC8-216ENST00000470998 MMP1P03956 469 aa6.47□□□□□ -1.37
HDAC8-216ENST00000470998 CETPP11597 493 aa6.47□□□□□ -1.37
HDAC8-216ENST00000470998 CALML3P27482 149 aa6.47□□□□□ -1.37
HDAC8-216ENST00000470998 PRDX5P30044 214 aa6.47□□□□□ -1.37
HDAC8-216ENST00000470998 GPC1P35052 558 aa6.47□□□□□ -1.37
HDAC8-216ENST00000470998 ZNF165P49910 485 aa6.47□□□□□ -1.37
HDAC8-216ENST00000470998 SP3Q02447 781 aa6.47□□□□□ -1.37
HDAC8-216ENST00000470998 MECOMQ03112 1051 aa6.47□□□□□ -1.37
HDAC8-216ENST00000470998 PPATQ06203 517 aa6.47□□□□□ -1.37
HDAC8-216ENST00000470998 PPIL2Q13356 520 aa6.47□□□□□ -1.37
HDAC8-216ENST00000470998 SNAPC2Q13487 334 aa6.47□□□□□ -1.37
HDAC8-216ENST00000470998 CCL15Q16663 113 aa6.47□□□□□ -1.37
HDAC8-216ENST00000470998 CT47A1Q5JQC4 288 aaPredicted RBP6.47□□□□□ -1.37
HDAC8-216ENST00000470998 NOL9Q5SY16 702 aaKnown RBP6.47□□□□□ -1.37
HDAC8-216ENST00000470998 KANK3Q6NY19 840 aa6.47□□□□□ -1.37
HDAC8-216ENST00000470998 USP17L2Q6R6M4 530 aa6.47□□□□□ -1.37
HDAC8-216ENST00000470998 CHST3Q7LGC8 479 aa6.47□□□□□ -1.37
HDAC8-216ENST00000470998 TRIM50Q86XT4 487 aa6.47□□□□□ -1.37
HDAC8-216ENST00000470998 FMR1NBQ8N0W7 255 aaPredicted RBP6.47□□□□□ -1.37
HDAC8-216ENST00000470998 CRACR2BQ8N4Y2 399 aaPredicted RBP6.47□□□□□ -1.37
HDAC8-216ENST00000470998 MIGA1Q8NAN2 632 aa6.47□□□□□ -1.37
HDAC8-216ENST00000470998 CTCFLQ8NI51 663 aaPredicted RBP6.47□□□□□ -1.37
HDAC8-216ENST00000470998 ANKS1AQ92625 1134 aa6.47□□□□□ -1.37
HDAC8-216ENST00000470998 CHAMP1Q96JM3 812 aa6.47□□□□□ -1.37
HDAC8-216ENST00000470998 WRNIP1Q96S55 665 aa6.47□□□□□ -1.37
HDAC8-216ENST00000470998 PTPN18Q99952 460 aa6.47□□□□□ -1.37
HDAC8-216ENST00000470998 LZTS2Q9BRK4 669 aa6.47□□□□□ -1.37
HDAC8-216ENST00000470998 IDI2Q9BXS1 227 aa6.47□□□□□ -1.37
HDAC8-216ENST00000470998 ZMYND15Q9H091 742 aa6.47□□□□□ -1.37
HDAC8-216ENST00000470998 DCP1AQ9NPI6 582 aaPredicted RBP6.47□□□□□ -1.37
HDAC8-216ENST00000470998 TCP11L1Q9NUJ3 509 aa6.47□□□□□ -1.37
HDAC8-216ENST00000470998 TFIP11Q9UBB9 837 aaKnown RBP6.47□□□□□ -1.37
HDAC8-216ENST00000470998 ZNF112Q9UJU3 913 aa6.47□□□□□ -1.37
HDAC8-216ENST00000470998 DAGLAQ9Y4D2 1042 aa6.47□□□□□ -1.37
HDAC8-216ENST00000470998 TRIM17Q9Y577 477 aa6.47□□□□□ -1.37
HDAC8-216ENST00000470998 MRVI1Q9Y6F6 885 aa6.47□□□□□ -1.37
HDAC8-216ENST00000470998 SNCAIPQ9Y6H5 919 aa6.47□□□□□ -1.37
HDAC8-216ENST00000470998 CASP8AP2Q9UKL3 1982 aa6.47□□□□□ -1.37
HDAC8-216ENST00000470998 GAKO14976 1311 aa6.47□□□□□ -1.37
HDAC8-216ENST00000470998 ECM29Q5VYK3 1845 aa6.46□□□□□ -1.37
HDAC8-216ENST00000470998 BECN2A8MW95 431 aa6.46□□□□□ -1.38
HDAC8-216ENST00000470998 hCG_1984214I3L0E3 225 aa6.46□□□□□ -1.38
HDAC8-216ENST00000470998 TERTO14746 1132 aaKnown RBP6.46□□□□□ -1.38
HDAC8-216ENST00000470998 PRPF3O43395 683 aaKnown RBP6.46□□□□□ -1.38
HDAC8-216ENST00000470998 NRDCO43847 1150 aa6.46□□□□□ -1.38
HDAC8-216ENST00000470998 RANBP6O60518 1105 aaKnown RBP6.46□□□□□ -1.38
HDAC8-216ENST00000470998 TLR2O60603 784 aa6.46□□□□□ -1.38
HDAC8-216ENST00000470998 ADCY5O95622 1261 aa6.46□□□□□ -1.38
HDAC8-216ENST00000470998 CDC27P30260 824 aa6.46□□□□□ -1.38
HDAC8-216ENST00000470998 RNF144AP50876 292 aaPredicted RBP6.46□□□□□ -1.38
HDAC8-216ENST00000470998 ATP1A2P50993 1020 aa6.46□□□□□ -1.38
HDAC8-216ENST00000470998 CACNB3P54284 484 aa6.46□□□□□ -1.38
HDAC8-216ENST00000470998 PRMT2P55345 433 aa6.46□□□□□ -1.38
HDAC8-216ENST00000470998 CRHR2Q13324 411 aa6.46□□□□□ -1.38
HDAC8-216ENST00000470998 ORC2Q13416 577 aaPredicted RBP6.46□□□□□ -1.38
HDAC8-216ENST00000470998 SNW1Q13573 536 aaKnown RBP6.46□□□□□ -1.38
HDAC8-216ENST00000470998 TAF1CQ15572 869 aaPredicted RBP6.46□□□□□ -1.38
HDAC8-216ENST00000470998 CDC42EP5Q6NZY7 148 aa6.46□□□□□ -1.38
HDAC8-216ENST00000470998 FAM173BQ6P4H8 233 aa6.46□□□□□ -1.38
HDAC8-216ENST00000470998 CTR9Q6PD62 1173 aa6.46□□□□□ -1.38
HDAC8-216ENST00000470998 TMTC3Q6ZXV5 915 aa6.46□□□□□ -1.38
HDAC8-216ENST00000470998 OTOP1Q7RTM1 612 aa6.46□□□□□ -1.38
HDAC8-216ENST00000470998 PRICKLE2Q7Z3G6 844 aa6.46□□□□□ -1.38
HDAC8-216ENST00000470998 DIS3L2Q8IYB7 885 aaKnown RBP6.46□□□□□ -1.38
HDAC8-216ENST00000470998 ZNF713Q8N859 430 aaPredicted RBP6.46□□□□□ -1.38
HDAC8-216ENST00000470998 ENAHQ8N8S7 591 aaPredicted RBP6.46□□□□□ -1.38
HDAC8-216ENST00000470998 KDF1Q8NAX2 398 aaPredicted RBP6.46□□□□□ -1.38
HDAC8-216ENST00000470998 CCDC12Q8WUD4 166 aaPredicted RBP6.46□□□□□ -1.38
HDAC8-216ENST00000470998 BRI3BPQ8WY22 251 aa6.46□□□□□ -1.38
HDAC8-216ENST00000470998 FERMT2Q96AC1 680 aa6.46□□□□□ -1.38
HDAC8-216ENST00000470998 MRFAP1L1Q96HT8 127 aa6.46□□□□□ -1.38
HDAC8-216ENST00000470998 SDF4Q9BRK5 362 aa6.46□□□□□ -1.38
HDAC8-216ENST00000470998 SLC26A6Q9BXS9 759 aa6.46□□□□□ -1.38
HDAC8-216ENST00000470998 EFCC1Q9HA90 598 aa6.46□□□□□ -1.38
HDAC8-216ENST00000470998 SH3GLB2Q9NR46 395 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms