RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 CCND2P30279 289 aa18.1■□□□□ 0.49
HDAC6-218ENST00000470942 PSMC6P62333 389 aa18.1■□□□□ 0.49
HDAC6-218ENST00000470942 APOBRQ0VD83 1088 aa18.1■□□□□ 0.49
HDAC6-218ENST00000470942 ITGA7Q13683 1181 aa18.1■□□□□ 0.49
HDAC6-218ENST00000470942 CCDC62Q6P9F0 684 aa18.1■□□□□ 0.49
HDAC6-218ENST00000470942 VSIG10LQ86VR7 867 aa18.1■□□□□ 0.49
HDAC6-218ENST00000470942 TDHQ8IZJ6 230 aa18.1■□□□□ 0.49
HDAC6-218ENST00000470942 BRF1Q92994 677 aa18.1■□□□□ 0.49
HDAC6-218ENST00000470942 MRVI1Q9Y6F6 885 aa18.1■□□□□ 0.49
HDAC6-218ENST00000470942 KIAA0355O15063 1070 aa18.09■□□□□ 0.49
HDAC6-218ENST00000470942 GH1P01241 217 aa18.09■□□□□ 0.49
HDAC6-218ENST00000470942 USP17L6PQ6QN14 398 aa18.09■□□□□ 0.49
HDAC6-218ENST00000470942 IL31RAQ8NI17 732 aa18.09■□□□□ 0.49
HDAC6-218ENST00000470942 ZFP91Q96JP5 570 aaPredicted RBP18.09■□□□□ 0.49
HDAC6-218ENST00000470942 USP26Q9BXU7 913 aa18.09■□□□□ 0.49
HDAC6-218ENST00000470942 CNTNAP5Q8WYK1 1306 aa18.08■□□□□ 0.49
HDAC6-218ENST00000470942 A6NJR5 290 aa18.08■□□□□ 0.48
HDAC6-218ENST00000470942 METAP2P50579 478 aaKnown RBP eCLIP18.08■□□□□ 0.48
HDAC6-218ENST00000470942 PURAQ00577 322 aaKnown RBP18.08■□□□□ 0.48
HDAC6-218ENST00000470942 HEATR3Q7Z4Q2 680 aa18.08■□□□□ 0.48
HDAC6-218ENST00000470942 GPKOWQ92917 476 aaPredicted RBP eCLIP18.08■□□□□ 0.48
HDAC6-218ENST00000470942 MTG1Q9BT17 334 aaPredicted RBP18.08■□□□□ 0.48
HDAC6-218ENST00000470942 SEZ6LQ9BYH1 1024 aa18.08■□□□□ 0.48
HDAC6-218ENST00000470942 PSTPIP2Q9H939 334 aa18.08■□□□□ 0.48
HDAC6-218ENST00000470942 DDX41Q9UJV9 622 aaKnown RBP18.08■□□□□ 0.48
HDAC6-218ENST00000470942 GRIN2DO15399 1336 aa18.07■□□□□ 0.48
HDAC6-218ENST00000470942 MEIS2O14770 477 aa18.07■□□□□ 0.48
HDAC6-218ENST00000470942 KPNA6O60684 536 aa18.07■□□□□ 0.48
HDAC6-218ENST00000470942 SLC34A2O95436 690 aa18.07■□□□□ 0.48
HDAC6-218ENST00000470942 ITGB8P26012 769 aa18.07■□□□□ 0.48
HDAC6-218ENST00000470942 CDC27P30260 824 aa18.07■□□□□ 0.48
HDAC6-218ENST00000470942 ARHGAP1Q07960 439 aa18.07■□□□□ 0.48
HDAC6-218ENST00000470942 KCNV1Q6PIU1 500 aa18.07■□□□□ 0.48
HDAC6-218ENST00000470942 FAM126BQ8IXS8 530 aa18.07■□□□□ 0.48
HDAC6-218ENST00000470942 SLC43A3Q8NBI5 491 aa18.07■□□□□ 0.48
HDAC6-218ENST00000470942 AFG1LQ8WV93 481 aa18.07■□□□□ 0.48
HDAC6-218ENST00000470942 V9GY48 417 aaPredicted RBP18.07■□□□□ 0.48
HDAC6-218ENST00000470942 PIK3CDO00329 1044 aa18.06■□□□□ 0.48
HDAC6-218ENST00000470942 RGS20O76081 388 aa18.06■□□□□ 0.48
HDAC6-218ENST00000470942 ADD1P35611 737 aaKnown RBP18.06■□□□□ 0.48
HDAC6-218ENST00000470942 RCAN1P53805 252 aa18.06■□□□□ 0.48
HDAC6-218ENST00000470942 CHMP4BP1P59074 171 aa18.06■□□□□ 0.48
HDAC6-218ENST00000470942 DHX37Q8IY37 1157 aaKnown RBP18.06■□□□□ 0.48
HDAC6-218ENST00000470942 FAM217BQ9NTX9 383 aaPredicted RBP18.06■□□□□ 0.48
HDAC6-218ENST00000470942 TBX21Q9UL17 535 aa18.06■□□□□ 0.48
HDAC6-218ENST00000470942 CCDC196A0A1B0GTZ2 297 aa18.05■□□□□ 0.48
HDAC6-218ENST00000470942 SORBS3O60504 671 aa18.05■□□□□ 0.48
HDAC6-218ENST00000470942 TIMP1P01033 207 aa18.05■□□□□ 0.48
HDAC6-218ENST00000470942 CD4P01730 458 aa18.05■□□□□ 0.48
HDAC6-218ENST00000470942 MMP3P08254 477 aa18.05■□□□□ 0.48
HDAC6-218ENST00000470942 NAPAP54920 295 aa18.05■□□□□ 0.48
HDAC6-218ENST00000470942 LAMC2Q13753 1193 aa18.05■□□□□ 0.48
HDAC6-218ENST00000470942 UBE2SQ16763 222 aa18.05■□□□□ 0.48
HDAC6-218ENST00000470942 FAM47CQ5HY64 1035 aa18.05■□□□□ 0.48
HDAC6-218ENST00000470942 WWC2Q6AWC2 1192 aa18.05■□□□□ 0.48
HDAC6-218ENST00000470942 RUFY3Q7L099 469 aa18.05■□□□□ 0.48
HDAC6-218ENST00000470942 PPP1R12CQ9BZL4 782 aa18.05■□□□□ 0.48
HDAC6-218ENST00000470942 TRPV6Q9H1D0 765 aa18.05■□□□□ 0.48
HDAC6-218ENST00000470942 RTEL1Q9NZ71 1219 aa18.05■□□□□ 0.48
HDAC6-218ENST00000470942 CYP46A1Q9Y6A2 500 aa18.05■□□□□ 0.48
HDAC6-218ENST00000470942 SCN10AQ9Y5Y9 1956 aa18.04■□□□□ 0.48
HDAC6-218ENST00000470942 FRMPD4Q14CM0 1322 aa18.04■□□□□ 0.48
HDAC6-218ENST00000470942 SOX1O00570 391 aaPredicted RBP18.04■□□□□ 0.48
HDAC6-218ENST00000470942 GGPS1O95749 300 aa18.04■□□□□ 0.48
HDAC6-218ENST00000470942 MRPS9P82933 396 aaKnown RBP18.04■□□□□ 0.48
HDAC6-218ENST00000470942 FPGSQ05932 587 aa18.04■□□□□ 0.48
HDAC6-218ENST00000470942 FUT2Q10981 343 aa18.04■□□□□ 0.48
HDAC6-218ENST00000470942 NBPF20Q3BBV1 942 aa18.04■□□□□ 0.48
HDAC6-218ENST00000470942 GNPTABQ3T906 1256 aa18.04■□□□□ 0.48
HDAC6-218ENST00000470942 FBXL16Q8N461 479 aa18.04■□□□□ 0.48
HDAC6-218ENST00000470942 PPP1R13LQ8WUF5 828 aa18.04■□□□□ 0.48
HDAC6-218ENST00000470942 ZSWIM6Q9HCJ5 1215 aa18.04■□□□□ 0.48
HDAC6-218ENST00000470942 DOCK5Q9H7D0 1870 aa18.03■□□□□ 0.48
HDAC6-218ENST00000470942 SPDYE3A6NKU9 549 aa18.03■□□□□ 0.48
HDAC6-218ENST00000470942 B4GALT4O60513 344 aa18.03■□□□□ 0.48
HDAC6-218ENST00000470942 STAM2O75886 525 aa18.03■□□□□ 0.48
HDAC6-218ENST00000470942 TGFB3P10600 412 aa18.03■□□□□ 0.48
HDAC6-218ENST00000470942 SP2Q02086 613 aa18.03■□□□□ 0.48
HDAC6-218ENST00000470942 DGKDQ16760 1214 aa18.03■□□□□ 0.48
HDAC6-218ENST00000470942 LRIT3Q3SXY7 679 aa18.03■□□□□ 0.48
HDAC6-218ENST00000470942 EMID1Q96A84 441 aaPredicted RBP18.03■□□□□ 0.48
HDAC6-218ENST00000470942 LRCH3Q96II8 777 aa18.03■□□□□ 0.48
HDAC6-218ENST00000470942 AGXT2Q9BYV1 514 aa18.03■□□□□ 0.48
HDAC6-218ENST00000470942 ALDH8A1Q9H2A2 487 aaPredicted RBP18.03■□□□□ 0.48
HDAC6-218ENST00000470942 MLXIPQ9HAP2 919 aa18.03■□□□□ 0.48
HDAC6-218ENST00000470942 hCG_1984214I3L0E3 225 aa18.02■□□□□ 0.48
HDAC6-218ENST00000470942 UBA1P22314 1058 aaKnown RBP18.02■□□□□ 0.48
HDAC6-218ENST00000470942 SHHQ15465 462 aa18.02■□□□□ 0.48
HDAC6-218ENST00000470942 C9orf50Q5SZB4 431 aa18.02■□□□□ 0.48
HDAC6-218ENST00000470942 CELF3Q5SZQ8 465 aaKnown RBP18.02■□□□□ 0.48
HDAC6-218ENST00000470942 MYSM1Q5VVJ2 828 aa18.02■□□□□ 0.48
HDAC6-218ENST00000470942 PCNX4Q63HM2 1172 aa18.02■□□□□ 0.48
HDAC6-218ENST00000470942 MFSD5Q6N075 450 aa18.02■□□□□ 0.48
HDAC6-218ENST00000470942 PPP1R18Q6NYC8 613 aa18.02■□□□□ 0.48
HDAC6-218ENST00000470942 XRRA1Q6P2D8 792 aa18.02■□□□□ 0.48
HDAC6-218ENST00000470942 ZNF713Q8N859 430 aaPredicted RBP18.02■□□□□ 0.48
HDAC6-218ENST00000470942 SPATA33Q96N06 139 aa18.02■□□□□ 0.48
HDAC6-218ENST00000470942 TM6SF1Q9BZW5 370 aa18.02■□□□□ 0.48
HDAC6-218ENST00000470942 TRMT13Q9NUP7 481 aaKnown RBP18.02■□□□□ 0.48
HDAC6-218ENST00000470942 PCDHA6Q9UN73 950 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms