RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 BATF3Q9NR55 127 aa10.49□□□□□ -0.73
NHLRC3-203ENST00000470258 NOP53Q9NZM5 478 aaKnown RBP10.49□□□□□ -0.73
NHLRC3-203ENST00000470258 CD2APQ9Y5K6 639 aa10.49□□□□□ -0.73
NHLRC3-203ENST00000470258 MYO5AQ9Y4I1 1855 aaKnown RBP10.49□□□□□ -0.73
NHLRC3-203ENST00000470258 KLHL33A6NCF5 533 aa10.49□□□□□ -0.73
NHLRC3-203ENST00000470258 TOM1O60784 492 aa10.49□□□□□ -0.73
NHLRC3-203ENST00000470258 DNAJC8O75937 253 aaPredicted RBP10.49□□□□□ -0.73
NHLRC3-203ENST00000470258 IFNAR2P48551 515 aa10.49□□□□□ -0.73
NHLRC3-203ENST00000470258 NLRP5P59047 1200 aa10.49□□□□□ -0.73
NHLRC3-203ENST00000470258 ERVK-9P63128 1117 aa10.49□□□□□ -0.73
NHLRC3-203ENST00000470258 NBPF20Q3BBV1 942 aa10.49□□□□□ -0.73
NHLRC3-203ENST00000470258 GNPTABQ3T906 1256 aa10.49□□□□□ -0.73
NHLRC3-203ENST00000470258 ARMC3Q5W041 872 aa10.49□□□□□ -0.73
NHLRC3-203ENST00000470258 MAGEB6Q8N7X4 407 aa10.49□□□□□ -0.73
NHLRC3-203ENST00000470258 HPS3Q969F9 1004 aa10.49□□□□□ -0.73
NHLRC3-203ENST00000470258 ELAC2Q9BQ52 826 aaKnown RBP10.49□□□□□ -0.73
NHLRC3-203ENST00000470258 CCDC113Q9H0I3 377 aa10.49□□□□□ -0.73
NHLRC3-203ENST00000470258 GOLPH3Q9H4A6 298 aa10.49□□□□□ -0.73
NHLRC3-203ENST00000470258 CNNM2Q9H8M5 875 aa10.49□□□□□ -0.73
NHLRC3-203ENST00000470258 NLRP2Q9NX02 1062 aa10.49□□□□□ -0.73
NHLRC3-203ENST00000470258 UBAP1LF5GYI3 381 aa10.48□□□□□ -0.73
NHLRC3-203ENST00000470258 KCNK3O14649 394 aa10.48□□□□□ -0.73
NHLRC3-203ENST00000470258 HSPA9P38646 679 aaKnown RBP10.48□□□□□ -0.73
NHLRC3-203ENST00000470258 ATP2C1P98194 919 aaPredicted RBP10.48□□□□□ -0.73
NHLRC3-203ENST00000470258 ANKRD40Q6AI12 368 aa10.48□□□□□ -0.73
NHLRC3-203ENST00000470258 MREGQ8N565 214 aa10.48□□□□□ -0.73
NHLRC3-203ENST00000470258 LRRC45Q96CN5 670 aa10.48□□□□□ -0.73
NHLRC3-203ENST00000470258 CHMP6Q96FZ7 201 aa10.48□□□□□ -0.73
NHLRC3-203ENST00000470258 NLRP3Q96P20 1036 aa10.48□□□□□ -0.73
NHLRC3-203ENST00000470258 STRBPQ96SI9 672 aaKnown RBP10.48□□□□□ -0.73
NHLRC3-203ENST00000470258 GOPCQ9HD26 462 aa10.48□□□□□ -0.73
NHLRC3-203ENST00000470258 PLCB1Q9NQ66 1216 aa10.48□□□□□ -0.73
NHLRC3-203ENST00000470258 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.48□□□□□ -0.73
NHLRC3-203ENST00000470258 TRPM3Q9HCF6 1732 aaPredicted RBP10.48□□□□□ -0.73
NHLRC3-203ENST00000470258 UBA7P41226 1012 aa10.48□□□□□ -0.73
NHLRC3-203ENST00000470258 PDE4DQ08499 809 aa10.48□□□□□ -0.73
NHLRC3-203ENST00000470258 UAP1Q16222 522 aaPredicted RBP10.48□□□□□ -0.73
NHLRC3-203ENST00000470258 IL17AQ16552 155 aa10.48□□□□□ -0.73
NHLRC3-203ENST00000470258 TTI2Q6NXR4 508 aa10.48□□□□□ -0.73
NHLRC3-203ENST00000470258 CADPS2Q86UW7 1296 aa10.48□□□□□ -0.73
NHLRC3-203ENST00000470258 KIF2BQ8N4N8 673 aa10.48□□□□□ -0.73
NHLRC3-203ENST00000470258 MIGA1Q8NAN2 632 aa10.48□□□□□ -0.73
NHLRC3-203ENST00000470258 ZNF570Q96NI8 536 aa10.48□□□□□ -0.73
NHLRC3-203ENST00000470258 DPH5Q9H2P9 285 aa10.48□□□□□ -0.73
NHLRC3-203ENST00000470258 CNNM1Q9NRU3 951 aa10.48□□□□□ -0.73
NHLRC3-203ENST00000470258 PLAGL2Q9UPG8 496 aa10.48□□□□□ -0.73
NHLRC3-203ENST00000470258 CEP104O60308 925 aa10.48□□□□□ -0.73
NHLRC3-203ENST00000470258 SNUPNO95149 360 aaKnown RBP10.48□□□□□ -0.73
NHLRC3-203ENST00000470258 DRD4P21917 467 aa10.48□□□□□ -0.73
NHLRC3-203ENST00000470258 FLT3P36888 993 aa10.48□□□□□ -0.73
NHLRC3-203ENST00000470258 KCNJ2P63252 427 aa10.48□□□□□ -0.73
NHLRC3-203ENST00000470258 LACTB2Q53H82 288 aaPredicted RBP10.48□□□□□ -0.73
NHLRC3-203ENST00000470258 TAX1BP1Q86VP1 789 aa10.48□□□□□ -0.73
NHLRC3-203ENST00000470258 SPICE1Q8N0Z3 855 aa10.48□□□□□ -0.73
NHLRC3-203ENST00000470258 CCDC26Q8TAB7 109 aa10.48□□□□□ -0.73
NHLRC3-203ENST00000470258 DUSP9Q99956 384 aaKnown RBP10.48□□□□□ -0.73
NHLRC3-203ENST00000470258 KDM4CQ9H3R0 1056 aa10.48□□□□□ -0.73
NHLRC3-203ENST00000470258 PNMA2Q9UL42 364 aa10.48□□□□□ -0.73
NHLRC3-203ENST00000470258 CIAO1O76071 339 aa10.47□□□□□ -0.73
NHLRC3-203ENST00000470258 ASIC1P78348 528 aa10.47□□□□□ -0.73
NHLRC3-203ENST00000470258 IFIT5Q13325 482 aaKnown RBP10.47□□□□□ -0.73
NHLRC3-203ENST00000470258 BIRC3Q13489 604 aa10.47□□□□□ -0.73
NHLRC3-203ENST00000470258 EMC10Q5UCC4 262 aa10.47□□□□□ -0.73
NHLRC3-203ENST00000470258 LDHAL6AQ6ZMR3 332 aa10.47□□□□□ -0.73
NHLRC3-203ENST00000470258 LRP10Q7Z4F1 713 aa10.47□□□□□ -0.73
NHLRC3-203ENST00000470258 FAM89AQ96GI7 184 aa10.47□□□□□ -0.73
NHLRC3-203ENST00000470258 PHF20Q9BVI0 1012 aa10.47□□□□□ -0.73
NHLRC3-203ENST00000470258 DDX47Q9H0S4 455 aaKnown RBP10.47□□□□□ -0.73
NHLRC3-203ENST00000470258 EBF2Q9HAK2 575 aa10.47□□□□□ -0.73
NHLRC3-203ENST00000470258 SAMD15Q9P1V8 674 aa10.47□□□□□ -0.73
NHLRC3-203ENST00000470258 SWAP70Q9UH65 585 aa10.47□□□□□ -0.73
NHLRC3-203ENST00000470258 PHF8Q9UPP1 1060 aa10.47□□□□□ -0.73
NHLRC3-203ENST00000470258 FAM170AA1A519 330 aa10.47□□□□□ -0.73
NHLRC3-203ENST00000470258 A8MUI8 341 aa10.47□□□□□ -0.73
NHLRC3-203ENST00000470258 F8W031 263 aaPredicted RBP10.47□□□□□ -0.73
NHLRC3-203ENST00000470258 PPIP5K2O43314 1243 aa10.47□□□□□ -0.73
NHLRC3-203ENST00000470258 EVI5O60447 810 aa10.47□□□□□ -0.73
NHLRC3-203ENST00000470258 MMEP08473 750 aa10.47□□□□□ -0.73
NHLRC3-203ENST00000470258 DHX9Q08211 1270 aaKnown RBP10.47□□□□□ -0.73
NHLRC3-203ENST00000470258 SEMA3FQ13275 785 aa10.47□□□□□ -0.73
NHLRC3-203ENST00000470258 ARMC9Q7Z3E5 817 aa10.47□□□□□ -0.73
NHLRC3-203ENST00000470258 FAM114A1Q8IWE2 563 aa10.47□□□□□ -0.73
NHLRC3-203ENST00000470258 HELBQ8NG08 1087 aaPredicted RBP10.47□□□□□ -0.73
NHLRC3-203ENST00000470258 P2RX5Q93086 422 aa10.47□□□□□ -0.73
NHLRC3-203ENST00000470258 XPO6Q96QU8 1125 aaKnown RBP10.47□□□□□ -0.73
NHLRC3-203ENST00000470258 PSMD1Q99460 953 aa10.47□□□□□ -0.73
NHLRC3-203ENST00000470258 RNF26Q9BY78 433 aaPredicted RBP10.47□□□□□ -0.73
NHLRC3-203ENST00000470258 NEUROG2Q9H2A3 272 aa10.47□□□□□ -0.73
NHLRC3-203ENST00000470258 LRRC4CQ9HCJ2 640 aa10.47□□□□□ -0.73
NHLRC3-203ENST00000470258 TNKSO95271 1327 aa10.47□□□□□ -0.73
NHLRC3-203ENST00000470258 DAPK3O43293 454 aa10.46□□□□□ -0.73
NHLRC3-203ENST00000470258 ORC4O43929 436 aa10.46□□□□□ -0.73
NHLRC3-203ENST00000470258 FCER1AP12319 257 aa10.46□□□□□ -0.73
NHLRC3-203ENST00000470258 PHKA1P46020 1223 aa10.46□□□□□ -0.73
NHLRC3-203ENST00000470258 RWDD2BP57060 319 aa10.46□□□□□ -0.73
NHLRC3-203ENST00000470258 PKN1Q16512 942 aa10.46□□□□□ -0.73
NHLRC3-203ENST00000470258 CDCA2Q69YH5 1023 aaPredicted RBP10.46□□□□□ -0.73
NHLRC3-203ENST00000470258 MIS18BP1Q6P0N0 1132 aa10.46□□□□□ -0.73
NHLRC3-203ENST00000470258 CCDC155Q8N6L0 562 aa10.46□□□□□ -0.73
NHLRC3-203ENST00000470258 UHMK1Q8TAS1 419 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms