RNA–Protein interactions for RNA: ENST00000470199.2

LMNA-211, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-211ENST00000470199 UPF3AQ9H1J1 476 aaKnown RBP20.5■□□□□ 0.87
LMNA-211ENST00000470199 C11orf49Q9H6J7 331 aa20.5■□□□□ 0.87
LMNA-211ENST00000470199 RTEL1Q9NZ71 1219 aa20.5■□□□□ 0.87
LMNA-211ENST00000470199 RBM27Q9P2N5 1060 aaKnown RBP20.5■□□□□ 0.87
LMNA-211ENST00000470199 DNM1LO00429 736 aa20.49■□□□□ 0.87
LMNA-211ENST00000470199 TNRC18O15417 2968 aaPredicted RBP20.49■□□□□ 0.87
LMNA-211ENST00000470199 DEXIO95424 95 aa20.49■□□□□ 0.87
LMNA-211ENST00000470199 CCND2P30279 289 aa20.49■□□□□ 0.87
LMNA-211ENST00000470199 CLK2P49760 499 aaKnown RBP20.49■□□□□ 0.87
LMNA-211ENST00000470199 GJA9P57773 515 aa20.49■□□□□ 0.87
LMNA-211ENST00000470199 LY6KQ17RY6 165 aa20.49■□□□□ 0.87
LMNA-211ENST00000470199 DUSP28Q4G0W2 176 aa20.49■□□□□ 0.87
LMNA-211ENST00000470199 JAKMIP3Q5VZ66 844 aa20.49■□□□□ 0.87
LMNA-211ENST00000470199 CCSAPQ6IQ19 270 aaPredicted RBP20.49■□□□□ 0.87
LMNA-211ENST00000470199 CCDC62Q6P9F0 684 aa20.49■□□□□ 0.87
LMNA-211ENST00000470199 TLK2Q86UE8 772 aa20.49■□□□□ 0.87
LMNA-211ENST00000470199 CCDC83Q8IWF9 413 aa20.49■□□□□ 0.87
LMNA-211ENST00000470199 NSUN7Q8NE18 718 aaKnown RBP20.49■□□□□ 0.87
LMNA-211ENST00000470199 RASGRP4Q8TDF6 673 aa20.49■□□□□ 0.87
LMNA-211ENST00000470199 FERMT2Q96AC1 680 aa20.49■□□□□ 0.87
LMNA-211ENST00000470199 ZMYND12Q9H0C1 365 aa20.49■□□□□ 0.87
LMNA-211ENST00000470199 C6orf222P0C671 652 aaPredicted RBP20.48■□□□□ 0.87
LMNA-211ENST00000470199 TXNP10599 105 aaKnown RBP20.48■□□□□ 0.87
LMNA-211ENST00000470199 CAPN2P17655 700 aa20.48■□□□□ 0.87
LMNA-211ENST00000470199 SCFD2Q8WU76 684 aa20.48■□□□□ 0.87
LMNA-211ENST00000470199 SENP6Q9GZR1 1112 aaPredicted RBP20.48■□□□□ 0.87
LMNA-211ENST00000470199 ESYT2A0FGR8 921 aa20.47■□□□□ 0.87
LMNA-211ENST00000470199 SPDYE3A6NKU9 549 aa20.47■□□□□ 0.87
LMNA-211ENST00000470199 KBTBD13C9JR72 458 aa20.47■□□□□ 0.87
LMNA-211ENST00000470199 SORBS3O60504 671 aa20.47■□□□□ 0.87
LMNA-211ENST00000470199 CDKL5O76039 1030 aa20.47■□□□□ 0.87
LMNA-211ENST00000470199 KCNA10Q16322 511 aa20.47■□□□□ 0.87
LMNA-211ENST00000470199 RNF180Q86T96 592 aa20.47■□□□□ 0.87
LMNA-211ENST00000470199 ANO3Q9BYT9 981 aa20.47■□□□□ 0.87
LMNA-211ENST00000470199 BCAS3Q9H6U6 928 aa20.47■□□□□ 0.87
LMNA-211ENST00000470199 ORC3Q9UBD5 711 aaPredicted RBP20.47■□□□□ 0.87
LMNA-211ENST00000470199 KCNJ14Q9UNX9 436 aa20.47■□□□□ 0.87
LMNA-211ENST00000470199 ATN1P54259 1190 aaPredicted RBP20.46■□□□□ 0.87
LMNA-211ENST00000470199 SP2Q02086 613 aa20.46■□□□□ 0.87
LMNA-211ENST00000470199 SEMA3FQ13275 785 aa20.46■□□□□ 0.87
LMNA-211ENST00000470199 TTLL4Q14679 1199 aa20.46■□□□□ 0.87
LMNA-211ENST00000470199 NPY5RQ15761 445 aa20.46■□□□□ 0.87
LMNA-211ENST00000470199 GNASQ5JWF2 1037 aa20.46■□□□□ 0.87
LMNA-211ENST00000470199 PCNX4Q63HM2 1172 aa20.46■□□□□ 0.87
LMNA-211ENST00000470199 AP5M1Q9H0R1 490 aa20.46■□□□□ 0.87
LMNA-211ENST00000470199 C6orf50Q9HD87 102 aa20.46■□□□□ 0.87
LMNA-211ENST00000470199 PCDH10Q9P2E7 1040 aa20.46■□□□□ 0.87
LMNA-211ENST00000470199 DDX41Q9UJV9 622 aaKnown RBP20.46■□□□□ 0.87
LMNA-211ENST00000470199 PHF24Q9UPV7 400 aa20.46■□□□□ 0.87
LMNA-211ENST00000470199 STK36Q9NRP7 1315 aa20.46■□□□□ 0.87
LMNA-211ENST00000470199 ACLYP53396 1101 aa20.45■□□□□ 0.86
LMNA-211ENST00000470199 NLRP5P59047 1200 aa20.45■□□□□ 0.86
LMNA-211ENST00000470199 NKX3-2P78367 333 aa20.45■□□□□ 0.86
LMNA-211ENST00000470199 LRRC26Q2I0M4 334 aa20.45■□□□□ 0.86
LMNA-211ENST00000470199 OR6J1Q8NGC5 347 aa20.45■□□□□ 0.86
LMNA-211ENST00000470199 CCDC12Q8WUD4 166 aaPredicted RBP20.45■□□□□ 0.86
LMNA-211ENST00000470199 SH3GLB2Q9NR46 395 aa20.45■□□□□ 0.86
LMNA-211ENST00000470199 MRVI1Q9Y6F6 885 aa20.45■□□□□ 0.86
LMNA-211ENST00000470199 ASGR1P07306 291 aa20.44■□□□□ 0.86
LMNA-211ENST00000470199 ITGB5P18084 799 aa20.44■□□□□ 0.86
LMNA-211ENST00000470199 CST5P28325 142 aaPredicted RBP20.44■□□□□ 0.86
LMNA-211ENST00000470199 FOSBP53539 338 aa20.44■□□□□ 0.86
LMNA-211ENST00000470199 ARHGAP1Q07960 439 aa20.44■□□□□ 0.86
LMNA-211ENST00000470199 FSCN1Q16658 493 aaKnown RBP20.44■□□□□ 0.86
LMNA-211ENST00000470199 CYP2W1Q8TAV3 490 aa20.44■□□□□ 0.86
LMNA-211ENST00000470199 ZSCAN31Q96LW9 406 aaPredicted RBP20.44■□□□□ 0.86
LMNA-211ENST00000470199 INPP4AQ96PE3 977 aaPredicted RBP20.44■□□□□ 0.86
LMNA-211ENST00000470199 Q9Y3F1 56 aa20.44■□□□□ 0.86
LMNA-211ENST00000470199 A0A1W2PQ45 241 aaPredicted RBP20.43■□□□□ 0.86
LMNA-211ENST00000470199 A0A1W2PQY0 241 aa20.43■□□□□ 0.86
LMNA-211ENST00000470199 ST18O60284 1047 aa20.43■□□□□ 0.86
LMNA-211ENST00000470199 FOSP01100 380 aaPredicted RBP20.43■□□□□ 0.86
LMNA-211ENST00000470199 REXO1Q8N1G1 1221 aaKnown RBP20.43■□□□□ 0.86
LMNA-211ENST00000470199 CCDC148Q8NFR7 591 aa20.43■□□□□ 0.86
LMNA-211ENST00000470199 ALG1Q9BT22 464 aa20.43■□□□□ 0.86
LMNA-211ENST00000470199 GLT8D2Q9H1C3 349 aa20.43■□□□□ 0.86
LMNA-211ENST00000470199 SPC25Q9HBM1 224 aa20.43■□□□□ 0.86
LMNA-211ENST00000470199 TELO2Q9Y4R8 837 aa20.43■□□□□ 0.86
LMNA-211ENST00000470199 UBIAD1Q9Y5Z9 338 aa20.43■□□□□ 0.86
LMNA-211ENST00000470199 KIAA1217Q5T5P2 1943 aa20.43■□□□□ 0.86
LMNA-211ENST00000470199 SPATA31C2B4DYI2 1134 aa20.42■□□□□ 0.86
LMNA-211ENST00000470199 EDIL3O43854 480 aa20.42■□□□□ 0.86
LMNA-211ENST00000470199 UBA1P22314 1058 aaKnown RBP20.42■□□□□ 0.86
LMNA-211ENST00000470199 GNA11P29992 359 aa20.42■□□□□ 0.86
LMNA-211ENST00000470199 SREBF1P36956 1147 aa20.42■□□□□ 0.86
LMNA-211ENST00000470199 AP3B2Q13367 1082 aa20.42■□□□□ 0.86
LMNA-211ENST00000470199 CXCL17Q6UXB2 119 aa20.42■□□□□ 0.86
LMNA-211ENST00000470199 DPF3Q92784 378 aa20.42■□□□□ 0.86
LMNA-211ENST00000470199 TSEN34Q9BSV6 310 aaKnown RBP20.42■□□□□ 0.86
LMNA-211ENST00000470199 PHF20Q9BVI0 1012 aa20.42■□□□□ 0.86
LMNA-211ENST00000470199 PCDHA4Q9UN74 947 aa20.42■□□□□ 0.86
LMNA-211ENST00000470199 M0R2N6 131 aa20.41■□□□□ 0.86
LMNA-211ENST00000470199 NKRFO15226 690 aaKnown RBP eCLIP20.41■□□□□ 0.86
LMNA-211ENST00000470199 GH1P01241 217 aa20.41■□□□□ 0.86
LMNA-211ENST00000470199 ICAM3P32942 547 aa20.41■□□□□ 0.86
LMNA-211ENST00000470199 ARHGAP4P98171 946 aa20.41■□□□□ 0.86
LMNA-211ENST00000470199 XRRA1Q6P2D8 792 aa20.41■□□□□ 0.86
LMNA-211ENST00000470199 SLC39A5Q6ZMH5 540 aa20.41■□□□□ 0.86
LMNA-211ENST00000470199 OXER1Q8TDS5 423 aa20.41■□□□□ 0.86
LMNA-211ENST00000470199 PPP1R13LQ8WUF5 828 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms