RNA–Protein interactions for RNA: ENST00000470160.1

KDM3A-210, Transcript of lysine demethylase 3A, humanhuman

TSL 2

Gene KDM3A, Length 2,955 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-210ENST00000470160 POLR2MP0CAP2 368 aa7.91□□□□□ -1.14
KDM3A-210ENST00000470160 USP17L24Q0WX57 530 aa7.91□□□□□ -1.14
KDM3A-210ENST00000470160 PSMD2Q13200 908 aa7.91□□□□□ -1.14
KDM3A-210ENST00000470160 USP17L6PQ6QN14 398 aa7.91□□□□□ -1.14
KDM3A-210ENST00000470160 ARHGAP27Q6ZUM4 889 aa7.91□□□□□ -1.14
KDM3A-210ENST00000470160 APTXQ7Z2E3 356 aaKnown RBP7.91□□□□□ -1.14
KDM3A-210ENST00000470160 LDHDQ86WU2 507 aa7.91□□□□□ -1.14
KDM3A-210ENST00000470160 RBM46Q8TBY0 533 aaKnown RBP7.91□□□□□ -1.14
KDM3A-210ENST00000470160 SLC5A5Q92911 643 aa7.91□□□□□ -1.14
KDM3A-210ENST00000470160 CALML4Q96GE6 196 aa7.91□□□□□ -1.14
KDM3A-210ENST00000470160 POLR3CQ9BUI4 534 aaPredicted RBP7.91□□□□□ -1.14
KDM3A-210ENST00000470160 TRIM9Q9C026 710 aa7.91□□□□□ -1.14
KDM3A-210ENST00000470160 LRWD1Q9UFC0 647 aa7.91□□□□□ -1.14
KDM3A-210ENST00000470160 GJA3Q9Y6H8 435 aa7.91□□□□□ -1.14
KDM3A-210ENST00000470160 LRRC37A2A6NM11 1700 aa7.91□□□□□ -1.14
KDM3A-210ENST00000470160 WDR81Q562E7 1941 aa7.91□□□□□ -1.14
KDM3A-210ENST00000470160 FRMD3A2A2Y4 597 aa7.9□□□□□ -1.14
KDM3A-210ENST00000470160 CBFA2T2O43439 604 aa7.9□□□□□ -1.14
KDM3A-210ENST00000470160 SETQ01105 290 aaPredicted RBP7.9□□□□□ -1.14
KDM3A-210ENST00000470160 PPP2R5CQ13362 524 aa7.9□□□□□ -1.14
KDM3A-210ENST00000470160 KARSQ15046 597 aaKnown RBP7.9□□□□□ -1.14
KDM3A-210ENST00000470160 ADSSL1Q8N142 457 aa7.9□□□□□ -1.14
KDM3A-210ENST00000470160 RAD54LQ92698 747 aa7.9□□□□□ -1.14
KDM3A-210ENST00000470160 PRDM4Q9UKN5 801 aa7.9□□□□□ -1.14
KDM3A-210ENST00000470160 VAV3Q9UKW4 847 aa7.9□□□□□ -1.14
KDM3A-210ENST00000470160 SPDYE3A6NKU9 549 aa7.9□□□□□ -1.15
KDM3A-210ENST00000470160 MEIS1O00470 390 aa7.9□□□□□ -1.15
KDM3A-210ENST00000470160 IRF6O14896 467 aa7.9□□□□□ -1.15
KDM3A-210ENST00000470160 YBX3P16989 372 aaKnown RBP eCLIP7.9□□□□□ -1.15
KDM3A-210ENST00000470160 PLCG1P19174 1290 aa7.9□□□□□ -1.15
KDM3A-210ENST00000470160 VCAM1P19320 739 aa7.9□□□□□ -1.15
KDM3A-210ENST00000470160 EPS15P42566 896 aa7.9□□□□□ -1.15
KDM3A-210ENST00000470160 ERCC4Q92889 916 aaPredicted RBP7.9□□□□□ -1.15
KDM3A-210ENST00000470160 DHTKD1Q96HY7 919 aaPredicted RBP7.9□□□□□ -1.15
KDM3A-210ENST00000470160 TTC12Q9H892 705 aaPredicted RBP7.9□□□□□ -1.15
KDM3A-210ENST00000470160 PCDHA12Q9UN75 941 aa7.9□□□□□ -1.15
KDM3A-210ENST00000470160 RPA1P27694 616 aa7.89□□□□□ -1.15
KDM3A-210ENST00000470160 DSG3P32926 999 aa7.89□□□□□ -1.15
KDM3A-210ENST00000470160 TECP42680 631 aa7.89□□□□□ -1.15
KDM3A-210ENST00000470160 KRT79Q5XKE5 535 aa7.89□□□□□ -1.15
KDM3A-210ENST00000470160 CATSPERGQ6ZRH7 1159 aa7.89□□□□□ -1.15
KDM3A-210ENST00000470160 UNC13DQ70J99 1090 aa7.89□□□□□ -1.15
KDM3A-210ENST00000470160 PDILTQ8N807 584 aa7.89□□□□□ -1.15
KDM3A-210ENST00000470160 NOC3LQ8WTT2 800 aaKnown RBP7.89□□□□□ -1.15
KDM3A-210ENST00000470160 SPTLC3Q9NUV7 552 aa7.89□□□□□ -1.15
KDM3A-210ENST00000470160 GGA3Q9NZ52 723 aa7.89□□□□□ -1.15
KDM3A-210ENST00000470160 FAM86B1E9PN63 330 aa7.89□□□□□ -1.15
KDM3A-210ENST00000470160 PSMD10O75832 226 aa7.89□□□□□ -1.15
KDM3A-210ENST00000470160 FAM86B2P0C5J1 330 aa7.89□□□□□ -1.15
KDM3A-210ENST00000470160 CD44P16070 742 aaKnown RBP7.89□□□□□ -1.15
KDM3A-210ENST00000470160 PBX1P40424 430 aa7.89□□□□□ -1.15
KDM3A-210ENST00000470160 GSDMDP57764 484 aa7.89□□□□□ -1.15
KDM3A-210ENST00000470160 FANCCQ00597 558 aa7.89□□□□□ -1.15
KDM3A-210ENST00000470160 FMR1Q06787 632 aaKnown RBP eCLIP7.89□□□□□ -1.15
KDM3A-210ENST00000470160 KRT26Q7Z3Y9 468 aa7.89□□□□□ -1.15
KDM3A-210ENST00000470160 GRAMD1CQ8IYS0 662 aa7.89□□□□□ -1.15
KDM3A-210ENST00000470160 RIT2Q99578 217 aa7.89□□□□□ -1.15
KDM3A-210ENST00000470160 TRIM5Q9C035 493 aa7.89□□□□□ -1.15
KDM3A-210ENST00000470160 TUFT1Q9NNX1 390 aa7.89□□□□□ -1.15
KDM3A-210ENST00000470160 PPP1R1BQ9UD71 204 aaPredicted RBP7.89□□□□□ -1.15
KDM3A-210ENST00000470160 LIMA1Q9UHB6 759 aaKnown RBP7.89□□□□□ -1.15
KDM3A-210ENST00000470160 A0A1B0GTH6 734 aa7.89□□□□□ -1.15
KDM3A-210ENST00000470160 PP2D1A8MPX8 630 aa7.89□□□□□ -1.15
KDM3A-210ENST00000470160 VWA5AO00534 786 aa7.89□□□□□ -1.15
KDM3A-210ENST00000470160 TXKP42681 527 aa7.89□□□□□ -1.15
KDM3A-210ENST00000470160 MAP3K9P80192 1104 aa7.89□□□□□ -1.15
KDM3A-210ENST00000470160 TBX2Q13207 712 aaPredicted RBP7.89□□□□□ -1.15
KDM3A-210ENST00000470160 PCNX4Q63HM2 1172 aa7.89□□□□□ -1.15
KDM3A-210ENST00000470160 HAUS3Q68CZ6 603 aa7.89□□□□□ -1.15
KDM3A-210ENST00000470160 SV2BQ7L1I2 683 aa7.89□□□□□ -1.15
KDM3A-210ENST00000470160 ZC3H3Q8IXZ2 948 aaKnown RBP7.89□□□□□ -1.15
KDM3A-210ENST00000470160 NEK9Q8TD19 979 aa7.89□□□□□ -1.15
KDM3A-210ENST00000470160 LARP4BQ92615 738 aaKnown RBP7.89□□□□□ -1.15
KDM3A-210ENST00000470160 UBIAD1Q9Y5Z9 338 aa7.89□□□□□ -1.15
KDM3A-210ENST00000470160 SNCAIPQ9Y6H5 919 aa7.89□□□□□ -1.15
KDM3A-210ENST00000470160 BIN1O00499 593 aa7.88□□□□□ -1.15
KDM3A-210ENST00000470160 MSH4O15457 936 aa7.88□□□□□ -1.15
KDM3A-210ENST00000470160 RRP9O43818 475 aaKnown RBP7.88□□□□□ -1.15
KDM3A-210ENST00000470160 LMOD1P29536 600 aaPredicted RBP7.88□□□□□ -1.15
KDM3A-210ENST00000470160 SPAG1Q07617 926 aa7.88□□□□□ -1.15
KDM3A-210ENST00000470160 NR1I3Q14994 352 aa7.88□□□□□ -1.15
KDM3A-210ENST00000470160 KMT5BQ4FZB7 885 aa7.88□□□□□ -1.15
KDM3A-210ENST00000470160 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.88□□□□□ -1.15
KDM3A-210ENST00000470160 SPICE1Q8N0Z3 855 aa7.88□□□□□ -1.15
KDM3A-210ENST00000470160 PROCA1Q8NCQ7 364 aaPredicted RBP7.88□□□□□ -1.15
KDM3A-210ENST00000470160 DNAJC19Q96DA6 116 aa7.88□□□□□ -1.15
KDM3A-210ENST00000470160 CTAGE1Q96RT6 745 aa7.88□□□□□ -1.15
KDM3A-210ENST00000470160 RRAGDQ9NQL2 400 aaPredicted RBP7.88□□□□□ -1.15
KDM3A-210ENST00000470160 PICK1Q9NRD5 415 aa7.88□□□□□ -1.15
KDM3A-210ENST00000470160 KCNH4Q9UQ05 1017 aa7.88□□□□□ -1.15
KDM3A-210ENST00000470160 ITIH6Q6UXX5 1313 aa7.88□□□□□ -1.15
KDM3A-210ENST00000470160 CXCL11O14625 94 aa7.88□□□□□ -1.15
KDM3A-210ENST00000470160 MAFGO15525 162 aa7.88□□□□□ -1.15
KDM3A-210ENST00000470160 ZBED4O75132 1171 aa7.88□□□□□ -1.15
KDM3A-210ENST00000470160 STAM2O75886 525 aa7.88□□□□□ -1.15
KDM3A-210ENST00000470160 LYPLA2O95372 231 aa7.88□□□□□ -1.15
KDM3A-210ENST00000470160 SPATA31C1P0DKV0 1188 aa7.88□□□□□ -1.15
KDM3A-210ENST00000470160 AFMP43652 599 aa7.88□□□□□ -1.15
KDM3A-210ENST00000470160 PPATQ06203 517 aa7.88□□□□□ -1.15
KDM3A-210ENST00000470160 CEP55Q53EZ4 464 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms