RNA–Protein interactions for RNA: ENST00000470115.1

GTF3C2-209, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-209ENST00000470115 TMEM199Q8N511 208 aa18.95■□□□□ 0.62
GTF3C2-209ENST00000470115 IL31RAQ8NI17 732 aa18.95■□□□□ 0.62
GTF3C2-209ENST00000470115 PPP1R13LQ8WUF5 828 aa18.95■□□□□ 0.62
GTF3C2-209ENST00000470115 RNPC3Q96LT9 517 aaKnown RBP18.95■□□□□ 0.62
GTF3C2-209ENST00000470115 DDX41Q9UJV9 622 aaKnown RBP18.95■□□□□ 0.62
GTF3C2-209ENST00000470115 SLC12A7Q9Y666 1083 aa18.95■□□□□ 0.62
GTF3C2-209ENST00000470115 RGS20O76081 388 aa18.94■□□□□ 0.62
GTF3C2-209ENST00000470115 EXOSC10Q01780 885 aaKnown RBP18.94■□□□□ 0.62
GTF3C2-209ENST00000470115 PPIGQ13427 754 aaKnown RBP eCLIP18.94■□□□□ 0.624e-7■■■□□ 18.1
GTF3C2-209ENST00000470115 ADCK5Q3MIX3 580 aa18.94■□□□□ 0.62
GTF3C2-209ENST00000470115 TSGA10IPQ3SY00 556 aa18.94■□□□□ 0.62
GTF3C2-209ENST00000470115 SGMS1Q86VZ5 419 aa18.94■□□□□ 0.62
GTF3C2-209ENST00000470115 FANCBQ8NB91 859 aa18.94■□□□□ 0.62
GTF3C2-209ENST00000470115 ZFP91Q96JP5 570 aaPredicted RBP18.94■□□□□ 0.62
GTF3C2-209ENST00000470115 HIPK3Q9H422 1215 aa18.94■□□□□ 0.62
GTF3C2-209ENST00000470115 TRMT13Q9NUP7 481 aaKnown RBP18.94■□□□□ 0.62
GTF3C2-209ENST00000470115 SEC63Q9UGP8 760 aaKnown RBP18.94■□□□□ 0.62
GTF3C2-209ENST00000470115 MRVI1Q9Y6F6 885 aa18.94■□□□□ 0.62
GTF3C2-209ENST00000470115 UMODL1Q5DID0 1318 aa18.94■□□□□ 0.62
GTF3C2-209ENST00000470115 KIAA1217Q5T5P2 1943 aa18.94■□□□□ 0.62
GTF3C2-209ENST00000470115 CHMP4BP1P59074 171 aa18.93■□□□□ 0.62
GTF3C2-209ENST00000470115 FAM47CQ5HY64 1035 aa18.93■□□□□ 0.62
GTF3C2-209ENST00000470115 ERICH6BQ5W0A0 696 aa18.93■□□□□ 0.62
GTF3C2-209ENST00000470115 CCDC82Q8N4S0 544 aa18.93■□□□□ 0.62
GTF3C2-209ENST00000470115 TCEANC2Q96MN5 208 aa18.93■□□□□ 0.62
GTF3C2-209ENST00000470115 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.93■□□□□ 0.624e-6■□□□□ 9.2
GTF3C2-209ENST00000470115 NOC4LQ9BVI4 516 aaKnown RBP18.93■□□□□ 0.62
GTF3C2-209ENST00000470115 MTMR10Q9NXD2 777 aa18.93■□□□□ 0.62
GTF3C2-209ENST00000470115 hCG_1642624A0A1W2PR95 340 aa18.92■□□□□ 0.62
GTF3C2-209ENST00000470115 MMP3P08254 477 aa18.92■□□□□ 0.62
GTF3C2-209ENST00000470115 ACRP10323 421 aa18.92■□□□□ 0.62
GTF3C2-209ENST00000470115 CYP2C9P11712 490 aa18.92■□□□□ 0.62
GTF3C2-209ENST00000470115 CCND2P30279 289 aa18.92■□□□□ 0.62
GTF3C2-209ENST00000470115 CCL23P55773 120 aa18.92■□□□□ 0.62
GTF3C2-209ENST00000470115 TMEM240Q5SV17 173 aa18.92■□□□□ 0.62
GTF3C2-209ENST00000470115 FAM109BQ6ICB4 259 aaPredicted RBP18.92■□□□□ 0.62
GTF3C2-209ENST00000470115 USP17L6PQ6QN14 398 aa18.92■□□□□ 0.62
GTF3C2-209ENST00000470115 SYNE3Q6ZMZ3 975 aa18.92■□□□□ 0.62
GTF3C2-209ENST00000470115 DHX32Q7L7V1 743 aaKnown RBP18.92■□□□□ 0.62
GTF3C2-209ENST00000470115 MICU3Q86XE3 530 aa18.92■□□□□ 0.62
GTF3C2-209ENST00000470115 SUPT20HL2P0C7V6 817 aa18.91■□□□□ 0.62
GTF3C2-209ENST00000470115 SMAD3P84022 425 aaKnown RBP18.91■□□□□ 0.62
GTF3C2-209ENST00000470115 LAMC2Q13753 1193 aa18.91■□□□□ 0.62
GTF3C2-209ENST00000470115 KRT32Q14532 448 aa18.91■□□□□ 0.62
GTF3C2-209ENST00000470115 NFRKBQ6P4R8 1299 aa18.91■□□□□ 0.62
GTF3C2-209ENST00000470115 APOA5Q6Q788 366 aa18.91■□□□□ 0.62
GTF3C2-209ENST00000470115 TMTC3Q6ZXV5 915 aa18.91■□□□□ 0.62
GTF3C2-209ENST00000470115 ZNF365Q70YC5 407 aa18.91■□□□□ 0.62
GTF3C2-209ENST00000470115 DHX37Q8IY37 1157 aaKnown RBP18.91■□□□□ 0.62
GTF3C2-209ENST00000470115 IL23AQ9NPF7 189 aa18.91■□□□□ 0.62
GTF3C2-209ENST00000470115 PPP4R2Q9NY27 417 aa18.91■□□□□ 0.62
GTF3C2-209ENST00000470115 BRPF3Q9ULD4 1205 aa18.91■□□□□ 0.62
GTF3C2-209ENST00000470115 SCN10AQ9Y5Y9 1956 aa18.91■□□□□ 0.62
GTF3C2-209ENST00000470115 COL6A3P12111 3177 aa18.9■□□□□ 0.62
GTF3C2-209ENST00000470115 SORBS3O60504 671 aa18.9■□□□□ 0.62
GTF3C2-209ENST00000470115 CASTP20810 708 aaKnown RBP18.9■□□□□ 0.62
GTF3C2-209ENST00000470115 SP2Q02086 613 aa18.9■□□□□ 0.62
GTF3C2-209ENST00000470115 DGKDQ16760 1214 aa18.9■□□□□ 0.62
GTF3C2-209ENST00000470115 KCNV1Q6PIU1 500 aa18.9■□□□□ 0.62
GTF3C2-209ENST00000470115 SMARCC2Q8TAQ2 1214 aa18.9■□□□□ 0.62
GTF3C2-209ENST00000470115 KAT2BQ92831 832 aa18.9■□□□□ 0.62
GTF3C2-209ENST00000470115 GPKOWQ92917 476 aaPredicted RBP eCLIP18.9■□□□□ 0.62
GTF3C2-209ENST00000470115 CUL5Q93034 780 aa18.9■□□□□ 0.62
GTF3C2-209ENST00000470115 EMID1Q96A84 441 aaPredicted RBP18.9■□□□□ 0.62
GTF3C2-209ENST00000470115 FAM161BQ96MY7 647 aa18.9■□□□□ 0.62
GTF3C2-209ENST00000470115 WNT8AQ9H1J5 351 aa18.9■□□□□ 0.62
GTF3C2-209ENST00000470115 MEIS2O14770 477 aa18.89■□□□□ 0.61
GTF3C2-209ENST00000470115 GGPS1O95749 300 aa18.89■□□□□ 0.61
GTF3C2-209ENST00000470115 TGFB3P10600 412 aa18.89■□□□□ 0.61
GTF3C2-209ENST00000470115 MRPS9P82933 396 aaKnown RBP18.89■□□□□ 0.61
GTF3C2-209ENST00000470115 PTPN11Q06124 597 aaPredicted RBP18.89■□□□□ 0.61
GTF3C2-209ENST00000470115 CELF3Q5SZQ8 465 aaKnown RBP18.89■□□□□ 0.61
GTF3C2-209ENST00000470115 MYSM1Q5VVJ2 828 aa18.89■□□□□ 0.61
GTF3C2-209ENST00000470115 KCNB2Q92953 911 aa18.89■□□□□ 0.61
GTF3C2-209ENST00000470115 PIK3CDO00329 1044 aa18.88■□□□□ 0.61
GTF3C2-209ENST00000470115 CPA1P15085 419 aa18.88■□□□□ 0.61
GTF3C2-209ENST00000470115 ZNF697Q5TEC3 545 aa18.88■□□□□ 0.61
GTF3C2-209ENST00000470115 PSRC1Q6PGN9 363 aaPredicted RBP18.88■□□□□ 0.61
GTF3C2-209ENST00000470115 PPTC7Q8NI37 304 aa18.88■□□□□ 0.61
GTF3C2-209ENST00000470115 SCLYQ96I15 445 aa18.88■□□□□ 0.61
GTF3C2-209ENST00000470115 SPATA33Q96N06 139 aa18.88■□□□□ 0.61
GTF3C2-209ENST00000470115 BCAS3Q9H6U6 928 aa18.88■□□□□ 0.61
GTF3C2-209ENST00000470115 PSTPIP2Q9H939 334 aa18.88■□□□□ 0.61
GTF3C2-209ENST00000470115 RTEL1Q9NZ71 1219 aa18.88■□□□□ 0.61
GTF3C2-209ENST00000470115 FRMPD4Q14CM0 1322 aa18.88■□□□□ 0.61
GTF3C2-209ENST00000470115 KLF18A0A0U1RQI7 1052 aa18.87■□□□□ 0.61
GTF3C2-209ENST00000470115 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.87■□□□□ 0.61
GTF3C2-209ENST00000470115 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.87■□□□□ 0.61
GTF3C2-209ENST00000470115 MYH7BA7E2Y1 1941 aa18.87■□□□□ 0.61
GTF3C2-209ENST00000470115 ZBTB43O43298 467 aa18.87■□□□□ 0.61
GTF3C2-209ENST00000470115 FGBP02675 491 aa18.87■□□□□ 0.61
GTF3C2-209ENST00000470115 HMGB1P09429 215 aaKnown RBP18.87■□□□□ 0.61
GTF3C2-209ENST00000470115 UBA1P22314 1058 aaKnown RBP18.87■□□□□ 0.61
GTF3C2-209ENST00000470115 RASIP1Q5U651 963 aa18.87■□□□□ 0.61
GTF3C2-209ENST00000470115 INPP4AQ96PE3 977 aaPredicted RBP18.87■□□□□ 0.61
GTF3C2-209ENST00000470115 RBM28Q9NW13 759 aaKnown RBP18.87■□□□□ 0.61
GTF3C2-209ENST00000470115 SNX14Q9Y5W7 946 aa18.87■□□□□ 0.61
GTF3C2-209ENST00000470115 PPFIA4O75335 1185 aa18.86■□□□□ 0.61
GTF3C2-209ENST00000470115 STAM2O75886 525 aa18.86■□□□□ 0.61
GTF3C2-209ENST00000470115 ZNF286BP0CG31 522 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms