RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 VSIG10LQ86VR7 867 aa16.26■□□□□ 0.19
COMMD3-208ENST00000470045 FANCBQ8NB91 859 aa16.26■□□□□ 0.19
COMMD3-208ENST00000470045 IL31RAQ8NI17 732 aa16.26■□□□□ 0.19
COMMD3-208ENST00000470045 TLR3O15455 904 aaKnown RBP16.25■□□□□ 0.19
COMMD3-208ENST00000470045 EPB41L2O43491 1005 aaKnown RBP16.25■□□□□ 0.19
COMMD3-208ENST00000470045 KPNA6O60684 536 aa16.25■□□□□ 0.19
COMMD3-208ENST00000470045 TIMP1P01033 207 aa16.25■□□□□ 0.19
COMMD3-208ENST00000470045 GH1P01241 217 aa16.25■□□□□ 0.19
COMMD3-208ENST00000470045 HMGB1P09429 215 aaKnown RBP16.25■□□□□ 0.19
COMMD3-208ENST00000470045 PSMC6P62333 389 aa16.25■□□□□ 0.19
COMMD3-208ENST00000470045 BRDTQ58F21 947 aaPredicted RBP16.25■□□□□ 0.19
COMMD3-208ENST00000470045 C9orf50Q5SZB4 431 aa16.25■□□□□ 0.19
COMMD3-208ENST00000470045 SEPT14Q6ZU15 432 aa16.25■□□□□ 0.19
COMMD3-208ENST00000470045 MICU3Q86XE3 530 aa16.25■□□□□ 0.19
COMMD3-208ENST00000470045 RAB11FIP4Q86YS3 637 aa16.25■□□□□ 0.19
COMMD3-208ENST00000470045 PIBF1Q8WXW3 757 aa16.25■□□□□ 0.19
COMMD3-208ENST00000470045 EMID1Q96A84 441 aaPredicted RBP16.25■□□□□ 0.19
COMMD3-208ENST00000470045 TCEANC2Q96MN5 208 aa16.25■□□□□ 0.19
COMMD3-208ENST00000470045 MTG1Q9BT17 334 aaPredicted RBP16.25■□□□□ 0.19
COMMD3-208ENST00000470045 PPP4R2Q9NY27 417 aa16.25■□□□□ 0.19
COMMD3-208ENST00000470045 SEC63Q9UGP8 760 aaKnown RBP16.25■□□□□ 0.19
COMMD3-208ENST00000470045 DDX41Q9UJV9 622 aaKnown RBP16.25■□□□□ 0.19
COMMD3-208ENST00000470045 BRPF3Q9ULD4 1205 aa16.25■□□□□ 0.19
COMMD3-208ENST00000470045 CNTNAP5Q8WYK1 1306 aa16.24■□□□□ 0.19
COMMD3-208ENST00000470045 C19orf67A6NJJ6 358 aa16.24■□□□□ 0.19
COMMD3-208ENST00000470045 PIK3CDO00329 1044 aa16.24■□□□□ 0.19
COMMD3-208ENST00000470045 REC8O95072 547 aa16.24■□□□□ 0.19
COMMD3-208ENST00000470045 RCAN1P53805 252 aa16.24■□□□□ 0.19
COMMD3-208ENST00000470045 EPHB4P54760 987 aa16.24■□□□□ 0.19
COMMD3-208ENST00000470045 FPGSQ05932 587 aa16.24■□□□□ 0.19
COMMD3-208ENST00000470045 SHHQ15465 462 aa16.24■□□□□ 0.19
COMMD3-208ENST00000470045 LY6KQ17RY6 165 aa16.24■□□□□ 0.19
COMMD3-208ENST00000470045 CMTR1Q8N1G2 835 aaKnown RBP16.24■□□□□ 0.19
COMMD3-208ENST00000470045 SNX14Q9Y5W7 946 aa16.24■□□□□ 0.19
COMMD3-208ENST00000470045 TANC1Q9C0D5 1861 aa16.24■□□□□ 0.19
COMMD3-208ENST00000470045 MEIS2O14770 477 aa16.23■□□□□ 0.19
COMMD3-208ENST00000470045 B4GALT4O60513 344 aa16.23■□□□□ 0.19
COMMD3-208ENST00000470045 GABBR2O75899 941 aa16.23■□□□□ 0.19
COMMD3-208ENST00000470045 MMP3P08254 477 aa16.23■□□□□ 0.19
COMMD3-208ENST00000470045 MYL3P08590 195 aa16.23■□□□□ 0.19
COMMD3-208ENST00000470045 CCND2P30279 289 aa16.23■□□□□ 0.19
COMMD3-208ENST00000470045 FUT2Q10981 343 aa16.23■□□□□ 0.19
COMMD3-208ENST00000470045 MFSD5Q6N075 450 aa16.23■□□□□ 0.19
COMMD3-208ENST00000470045 SYNE3Q6ZMZ3 975 aa16.23■□□□□ 0.19
COMMD3-208ENST00000470045 FCHSD1Q86WN1 690 aa16.23■□□□□ 0.19
COMMD3-208ENST00000470045 AFG1LQ8WV93 481 aa16.23■□□□□ 0.19
COMMD3-208ENST00000470045 ALDH8A1Q9H2A2 487 aaPredicted RBP16.23■□□□□ 0.19
COMMD3-208ENST00000470045 RBM28Q9NW13 759 aaKnown RBP16.23■□□□□ 0.19
COMMD3-208ENST00000470045 MRVI1Q9Y6F6 885 aa16.23■□□□□ 0.19
COMMD3-208ENST00000470045 NID2Q14112 1375 aa16.23■□□□□ 0.19
COMMD3-208ENST00000470045 DOCK5Q9H7D0 1870 aa16.22■□□□□ 0.19
COMMD3-208ENST00000470045 ZBTB43O43298 467 aa16.22■□□□□ 0.19
COMMD3-208ENST00000470045 MYCLP12524 364 aaPredicted RBP16.22■□□□□ 0.19
COMMD3-208ENST00000470045 HOXD8P13378 290 aaPredicted RBP16.22■□□□□ 0.19
COMMD3-208ENST00000470045 KCNV1Q6PIU1 500 aa16.22■□□□□ 0.19
COMMD3-208ENST00000470045 FBXL16Q8N461 479 aa16.22■□□□□ 0.19
COMMD3-208ENST00000470045 INPP4AQ96PE3 977 aaPredicted RBP16.22■□□□□ 0.19
COMMD3-208ENST00000470045 AGXT2Q9BYV1 514 aa16.22■□□□□ 0.19
COMMD3-208ENST00000470045 TRPV6Q9H1D0 765 aa16.22■□□□□ 0.19
COMMD3-208ENST00000470045 LAMA2P24043 3122 aaKnown RBP16.22■□□□□ 0.19
COMMD3-208ENST00000470045 KLF18A0A0U1RQI7 1052 aa16.21■□□□□ 0.19
COMMD3-208ENST00000470045 STAM2O75886 525 aa16.21■□□□□ 0.19
COMMD3-208ENST00000470045 TGFB3P10600 412 aa16.21■□□□□ 0.19
COMMD3-208ENST00000470045 MRPS9P82933 396 aaKnown RBP16.21■□□□□ 0.19
COMMD3-208ENST00000470045 PTPN11Q06124 597 aaPredicted RBP16.21■□□□□ 0.19
COMMD3-208ENST00000470045 RTN1Q16799 776 aa16.21■□□□□ 0.19
COMMD3-208ENST00000470045 NBPF20Q3BBV1 942 aa16.21■□□□□ 0.19
COMMD3-208ENST00000470045 NFRKBQ6P4R8 1299 aa16.21■□□□□ 0.19
COMMD3-208ENST00000470045 USP17L6PQ6QN14 398 aa16.21■□□□□ 0.19
COMMD3-208ENST00000470045 PPTC7Q8NI37 304 aa16.21■□□□□ 0.19
COMMD3-208ENST00000470045 JAKMIP1Q96N16 626 aaKnown RBP16.21■□□□□ 0.19
COMMD3-208ENST00000470045 NOC4LQ9BVI4 516 aaKnown RBP16.21■□□□□ 0.19
COMMD3-208ENST00000470045 PPP1R12CQ9BZL4 782 aa16.21■□□□□ 0.19
COMMD3-208ENST00000470045 FAM217BQ9NTX9 383 aaPredicted RBP16.21■□□□□ 0.19
COMMD3-208ENST00000470045 hCG_1642624A0A1W2PR95 340 aa16.2■□□□□ 0.18
COMMD3-208ENST00000470045 CPA1P15085 419 aa16.2■□□□□ 0.18
COMMD3-208ENST00000470045 UBA1P22314 1058 aaKnown RBP16.2■□□□□ 0.18
COMMD3-208ENST00000470045 ICAM3P32942 547 aa16.2■□□□□ 0.18
COMMD3-208ENST00000470045 PPIGQ13427 754 aaKnown RBP eCLIP16.2■□□□□ 0.18
COMMD3-208ENST00000470045 LAMC2Q13753 1193 aa16.2■□□□□ 0.18
COMMD3-208ENST00000470045 XRRA1Q6P2D8 792 aa16.2■□□□□ 0.18
COMMD3-208ENST00000470045 BLOC1S2Q6QNY1 142 aa16.2■□□□□ 0.18
COMMD3-208ENST00000470045 CCDC82Q8N4S0 544 aa16.2■□□□□ 0.18
COMMD3-208ENST00000470045 SMARCC2Q8TAQ2 1214 aa16.2■□□□□ 0.18
COMMD3-208ENST00000470045 KAT2BQ92831 832 aa16.2■□□□□ 0.18
COMMD3-208ENST00000470045 CUL5Q93034 780 aa16.2■□□□□ 0.18
COMMD3-208ENST00000470045 HIPK3Q9H422 1215 aa16.2■□□□□ 0.18
COMMD3-208ENST00000470045 UMODL1Q5DID0 1318 aa16.19■□□□□ 0.18
COMMD3-208ENST00000470045 GOLGA8AA7E2F4 631 aa16.19■□□□□ 0.18
COMMD3-208ENST00000470045 GOLGA8BA8MQT2 603 aa16.19■□□□□ 0.18
COMMD3-208ENST00000470045 F2P00734 622 aa16.19■□□□□ 0.18
COMMD3-208ENST00000470045 SUPT20HL2P0C7V6 817 aa16.19■□□□□ 0.18
COMMD3-208ENST00000470045 CSF2RAP15509 400 aa16.19■□□□□ 0.18
COMMD3-208ENST00000470045 RPS6KB1P23443 525 aa16.19■□□□□ 0.18
COMMD3-208ENST00000470045 CDC27P30260 824 aa16.19■□□□□ 0.18
COMMD3-208ENST00000470045 CYP2C18P33260 490 aa16.19■□□□□ 0.18
COMMD3-208ENST00000470045 SP2Q02086 613 aa16.19■□□□□ 0.18
COMMD3-208ENST00000470045 SEMA3FQ13275 785 aa16.19■□□□□ 0.18
COMMD3-208ENST00000470045 DGKDQ16760 1214 aa16.19■□□□□ 0.18
COMMD3-208ENST00000470045 CELF3Q5SZQ8 465 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms