RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 A0A1W2PQD8 194 aa5.85□□□□□ -1.47
VPS8-220ENST00000469713 APPP05067 770 aa5.85□□□□□ -1.47
VPS8-220ENST00000469713 CKMP06732 381 aa5.85□□□□□ -1.47
VPS8-220ENST00000469713 PRKCAP17252 672 aa5.85□□□□□ -1.47
VPS8-220ENST00000469713 CNGA1P29973 690 aa5.85□□□□□ -1.47
VPS8-220ENST00000469713 GALK1P51570 392 aa5.85□□□□□ -1.47
VPS8-220ENST00000469713 NEK4P51957 841 aa5.85□□□□□ -1.47
VPS8-220ENST00000469713 CORO7P57737 925 aa5.85□□□□□ -1.47
VPS8-220ENST00000469713 AMPD3Q01432 767 aa5.85□□□□□ -1.47
VPS8-220ENST00000469713 PCBP1Q15365 356 aaKnown RBP eCLIP5.85□□□□□ -1.47
VPS8-220ENST00000469713 NR0B2Q15466 257 aa5.85□□□□□ -1.47
VPS8-220ENST00000469713 CFAP100Q494V2 611 aa5.85□□□□□ -1.47
VPS8-220ENST00000469713 PIK3R6Q5UE93 754 aa5.85□□□□□ -1.47
VPS8-220ENST00000469713 CDCA2Q69YH5 1023 aaPredicted RBP5.85□□□□□ -1.47
VPS8-220ENST00000469713 ZCCHC8Q6NZY4 707 aaKnown RBP5.85□□□□□ -1.47
VPS8-220ENST00000469713 ABI1Q8IZP0 508 aa5.85□□□□□ -1.47
VPS8-220ENST00000469713 Q8N1Y9 231 aa5.85□□□□□ -1.47
VPS8-220ENST00000469713 PPM1KQ8N3J5 372 aa5.85□□□□□ -1.47
VPS8-220ENST00000469713 IGSF22Q8N9C0 903 aa5.85□□□□□ -1.47
VPS8-220ENST00000469713 NLGN2Q8NFZ4 835 aa5.85□□□□□ -1.47
VPS8-220ENST00000469713 PLEKHO2Q8TD55 490 aa5.85□□□□□ -1.47
VPS8-220ENST00000469713 TRMT2BQ96GJ1 504 aaKnown RBP5.85□□□□□ -1.47
VPS8-220ENST00000469713 PUS7Q96PZ0 661 aaKnown RBP5.85□□□□□ -1.47
VPS8-220ENST00000469713 KCNJ15Q99712 375 aa5.85□□□□□ -1.47
VPS8-220ENST00000469713 JAM3Q9BX67 310 aa5.85□□□□□ -1.47
VPS8-220ENST00000469713 FAM126AQ9BYI3 521 aaPredicted RBP5.85□□□□□ -1.47
VPS8-220ENST00000469713 MTFR1LQ9H019 292 aa5.85□□□□□ -1.47
VPS8-220ENST00000469713 CAAP1Q9H8G2 361 aa5.85□□□□□ -1.47
VPS8-220ENST00000469713 SAMD15Q9P1V8 674 aa5.85□□□□□ -1.47
VPS8-220ENST00000469713 GPR160Q9UJ42 338 aa5.85□□□□□ -1.47
VPS8-220ENST00000469713 ACSL6Q9UKU0 697 aa5.85□□□□□ -1.47
VPS8-220ENST00000469713 MAPRE3Q9UPY8 281 aa5.85□□□□□ -1.47
VPS8-220ENST00000469713 B4E1Z4 1266 aa5.84□□□□□ -1.47
VPS8-220ENST00000469713 C22orf46C9J442 243 aa5.84□□□□□ -1.47
VPS8-220ENST00000469713 FAM47E-STBD1D6RA91 191 aa5.84□□□□□ -1.47
VPS8-220ENST00000469713 H7BY64 318 aa5.84□□□□□ -1.47
VPS8-220ENST00000469713 GLRX3O76003 335 aaKnown RBP5.84□□□□□ -1.47
VPS8-220ENST00000469713 POU3F2P20265 443 aaPredicted RBP5.84□□□□□ -1.47
VPS8-220ENST00000469713 SOX5P35711 763 aa5.84□□□□□ -1.47
VPS8-220ENST00000469713 FLT3P36888 993 aa5.84□□□□□ -1.47
VPS8-220ENST00000469713 PKN3Q6P5Z2 889 aa5.84□□□□□ -1.47
VPS8-220ENST00000469713 NLRX1Q86UT6 975 aa5.84□□□□□ -1.47
VPS8-220ENST00000469713 LZTR1Q8N653 840 aa5.84□□□□□ -1.47
VPS8-220ENST00000469713 ZCRB1Q8TBF4 217 aaKnown RBP5.84□□□□□ -1.47
VPS8-220ENST00000469713 USP33Q8TEY7 942 aa5.84□□□□□ -1.47
VPS8-220ENST00000469713 LEO1Q8WVC0 666 aaPredicted RBP5.84□□□□□ -1.47
VPS8-220ENST00000469713 MYLIPQ8WY64 445 aa5.84□□□□□ -1.47
VPS8-220ENST00000469713 PDLIM7Q9NR12 457 aa5.84□□□□□ -1.47
VPS8-220ENST00000469713 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.84□□□□□ -1.47
VPS8-220ENST00000469713 CCDC66A2RUB6 948 aa5.83□□□□□ -1.48
VPS8-220ENST00000469713 WNT9AO14904 365 aa5.83□□□□□ -1.48
VPS8-220ENST00000469713 PYGMP11217 842 aa5.83□□□□□ -1.48
VPS8-220ENST00000469713 RAC2P15153 192 aa5.83□□□□□ -1.48
VPS8-220ENST00000469713 POU3F3P20264 500 aaPredicted RBP5.83□□□□□ -1.48
VPS8-220ENST00000469713 DNM2P50570 870 aa5.83□□□□□ -1.48
VPS8-220ENST00000469713 GP2P55259 537 aaKnown RBP5.83□□□□□ -1.48
VPS8-220ENST00000469713 SEPT7Q16181 437 aaKnown RBP5.83□□□□□ -1.48
VPS8-220ENST00000469713 CT47A1Q5JQC4 288 aaPredicted RBP5.83□□□□□ -1.48
VPS8-220ENST00000469713 UBE2R2Q712K3 238 aaPredicted RBP5.83□□□□□ -1.48
VPS8-220ENST00000469713 DDX53Q86TM3 631 aaKnown RBP5.83□□□□□ -1.48
VPS8-220ENST00000469713 SIRT2Q8IXJ6 389 aa5.83□□□□□ -1.48
VPS8-220ENST00000469713 AHI1Q8N157 1196 aa5.83□□□□□ -1.48
VPS8-220ENST00000469713 CISD2Q8N5K1 135 aaKnown RBP5.83□□□□□ -1.48
VPS8-220ENST00000469713 FBXW5Q969U6 566 aa5.83□□□□□ -1.48
VPS8-220ENST00000469713 SHISA4Q96DD7 197 aa5.83□□□□□ -1.48
VPS8-220ENST00000469713 CELF4Q9BZC1 486 aaKnown RBP5.83□□□□□ -1.48
VPS8-220ENST00000469713 BRINP2Q9C0B6 783 aa5.83□□□□□ -1.48
VPS8-220ENST00000469713 CBLCQ9ULV8 474 aa5.83□□□□□ -1.48
VPS8-220ENST00000469713 X6R8D5 127 aa5.83□□□□□ -1.48
VPS8-220ENST00000469713 hCG_2014768A0A024R1R8 64 aa5.82□□□□□ -1.48
VPS8-220ENST00000469713 M0R2C6 588 aa5.82□□□□□ -1.48
VPS8-220ENST00000469713 COL6A2P12110 1019 aa5.82□□□□□ -1.48
VPS8-220ENST00000469713 IBSPP21815 317 aaPredicted RBP5.82□□□□□ -1.48
VPS8-220ENST00000469713 ST5P78524 1137 aa5.82□□□□□ -1.48
VPS8-220ENST00000469713 CYP4F8P98187 520 aa5.82□□□□□ -1.48
VPS8-220ENST00000469713 SKOR2Q2VWA4 1001 aaPredicted RBP5.82□□□□□ -1.48
VPS8-220ENST00000469713 FAM47CQ5HY64 1035 aa5.82□□□□□ -1.48
VPS8-220ENST00000469713 BICRALQ6AI39 1079 aa5.82□□□□□ -1.48
VPS8-220ENST00000469713 C16orf59Q7L2K0 433 aa5.82□□□□□ -1.48
VPS8-220ENST00000469713 STRA8Q7Z7C7 330 aa5.82□□□□□ -1.48
VPS8-220ENST00000469713 NBPF11Q86T75 865 aa5.82□□□□□ -1.48
VPS8-220ENST00000469713 LILRA2Q8N149 483 aa5.82□□□□□ -1.48
VPS8-220ENST00000469713 WNK4Q96J92 1243 aa5.82□□□□□ -1.48
VPS8-220ENST00000469713 RNF32Q9H0A6 362 aa5.82□□□□□ -1.48
VPS8-220ENST00000469713 EPB41L1Q9H4G0 881 aa5.82□□□□□ -1.48
VPS8-220ENST00000469713 CATSPERZQ9NTU4 200 aa5.82□□□□□ -1.48
VPS8-220ENST00000469713 ADGRE2Q9UHX3 823 aa5.82□□□□□ -1.48
VPS8-220ENST00000469713 COA3Q9Y2R0 106 aaPredicted RBP5.82□□□□□ -1.48
VPS8-220ENST00000469713 NOP58Q9Y2X3 529 aaKnown RBP5.82□□□□□ -1.48
VPS8-220ENST00000469713 A0A1W2PQJ5 194 aa5.81□□□□□ -1.48
VPS8-220ENST00000469713 CBX4O00257 560 aa5.81□□□□□ -1.48
VPS8-220ENST00000469713 PPM1GO15355 546 aaPredicted RBP5.81□□□□□ -1.48
VPS8-220ENST00000469713 NPTXRO95502 500 aa5.81□□□□□ -1.48
VPS8-220ENST00000469713 NTRK1P04629 796 aa5.81□□□□□ -1.48
VPS8-220ENST00000469713 GNAT1P11488 350 aa5.81□□□□□ -1.48
VPS8-220ENST00000469713 PNLIPP16233 465 aa5.81□□□□□ -1.48
VPS8-220ENST00000469713 TMEM177Q53S58 311 aa5.81□□□□□ -1.48
VPS8-220ENST00000469713 FYB2Q5VWT5 728 aa5.81□□□□□ -1.48
VPS8-220ENST00000469713 OVCH1Q7RTY7 1134 aa5.81□□□□□ -1.48
VPS8-220ENST00000469713 RIOX2Q8IUF8 465 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms