RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 C20orf194Q5TEA3 1177 aa21.45■■□□□ 1.02
TTC28-205ENST00000469670 VPS53Q5VIR6 699 aa21.45■■□□□ 1.02
TTC28-205ENST00000469670 PTCRAQ6ISU1 281 aaPredicted RBP21.45■■□□□ 1.02
TTC28-205ENST00000469670 CHST3Q7LGC8 479 aa21.45■■□□□ 1.02
TTC28-205ENST00000469670 UIMC1Q96RL1 719 aa21.45■■□□□ 1.02
TTC28-205ENST00000469670 GTF2IRD1Q9UHL9 959 aa21.45■■□□□ 1.02
TTC28-205ENST00000469670 ZNF543Q08ER8 600 aa21.44■■□□□ 1.02
TTC28-205ENST00000469670 RRP12Q5JTH9 1297 aaKnown RBP21.44■■□□□ 1.02
TTC28-205ENST00000469670 SEPT14Q6ZU15 432 aa21.44■■□□□ 1.02
TTC28-205ENST00000469670 C7orf31Q8N865 590 aa21.44■■□□□ 1.02
TTC28-205ENST00000469670 RGS22Q8NE09 1264 aa21.44■■□□□ 1.02
TTC28-205ENST00000469670 FBXO22Q8NEZ5 403 aa21.44■■□□□ 1.02
TTC28-205ENST00000469670 C17orf80Q9BSJ5 609 aa21.44■■□□□ 1.02
TTC28-205ENST00000469670 TCP11L1Q9NUJ3 509 aa21.44■■□□□ 1.02
TTC28-205ENST00000469670 HDAC6Q9UBN7 1215 aa21.44■■□□□ 1.02
TTC28-205ENST00000469670 GRXCR2A6NFK2 248 aa21.43■■□□□ 1.02
TTC28-205ENST00000469670 PTK7Q13308 1070 aa21.43■■□□□ 1.02
TTC28-205ENST00000469670 DGKDQ16760 1214 aa21.43■■□□□ 1.02
TTC28-205ENST00000469670 CSPP1Q1MSJ5 1256 aa21.43■■□□□ 1.02
TTC28-205ENST00000469670 USH1GQ495M9 461 aa21.43■■□□□ 1.02
TTC28-205ENST00000469670 INSL6Q9Y581 213 aa21.43■■□□□ 1.02
TTC28-205ENST00000469670 RBAK-RBAKDNI3L0D1 243 aa21.42■■□□□ 1.02
TTC28-205ENST00000469670 PSEN2P49810 448 aa21.42■■□□□ 1.02
TTC28-205ENST00000469670 PUS10Q3MIT2 529 aaKnown RBP21.42■■□□□ 1.02
TTC28-205ENST00000469670 TRAF7Q6Q0C0 670 aa21.42■■□□□ 1.02
TTC28-205ENST00000469670 OTUD7AQ8TE49 926 aaPredicted RBP21.42■■□□□ 1.02
TTC28-205ENST00000469670 ALG1Q9BT22 464 aa21.42■■□□□ 1.02
TTC28-205ENST00000469670 SNHG28P0DPA3 235 aa21.41■■□□□ 1.02
TTC28-205ENST00000469670 MBTPS1Q14703 1052 aa21.41■■□□□ 1.02
TTC28-205ENST00000469670 ALX1Q15699 326 aa21.41■■□□□ 1.02
TTC28-205ENST00000469670 TRIM71Q2Q1W2 868 aaKnown RBP21.41■■□□□ 1.02
TTC28-205ENST00000469670 ZNF618Q5T7W0 954 aa21.41■■□□□ 1.02
TTC28-205ENST00000469670 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.41■■□□□ 1.02
TTC28-205ENST00000469670 NEK9Q8TD19 979 aa21.41■■□□□ 1.02
TTC28-205ENST00000469670 MRPL38Q96DV4 380 aaKnown RBP21.41■■□□□ 1.02
TTC28-205ENST00000469670 TAAR1Q96RJ0 339 aa21.41■■□□□ 1.02
TTC28-205ENST00000469670 KATNAL1Q9BW62 490 aa21.41■■□□□ 1.02
TTC28-205ENST00000469670 CTNNA3Q9UI47 895 aa21.41■■□□□ 1.02
TTC28-205ENST00000469670 TRIP12Q14669 1992 aaPredicted RBP21.41■■□□□ 1.02
TTC28-205ENST00000469670 LGR5O75473 907 aa21.4■■□□□ 1.02
TTC28-205ENST00000469670 MRE11P49959 708 aa21.4■■□□□ 1.02
TTC28-205ENST00000469670 MFSD10Q14728 455 aa21.4■■□□□ 1.02
TTC28-205ENST00000469670 STXBP2Q15833 593 aa21.4■■□□□ 1.02
TTC28-205ENST00000469670 SYTL5Q8TDW5 730 aaPredicted RBP21.4■■□□□ 1.02
TTC28-205ENST00000469670 NSUN6Q8TEA1 469 aaKnown RBP21.4■■□□□ 1.02
TTC28-205ENST00000469670 TBC1D5Q92609 795 aa21.4■■□□□ 1.02
TTC28-205ENST00000469670 WNT8BQ93098 351 aa21.4■■□□□ 1.02
TTC28-205ENST00000469670 TTC14Q96N46 770 aa21.4■■□□□ 1.02
TTC28-205ENST00000469670 RCAN3Q9UKA8 241 aa21.4■■□□□ 1.02
TTC28-205ENST00000469670 H3BQ06 376 aaPredicted RBP21.39■■□□□ 1.01
TTC28-205ENST00000469670 DCXO43602 365 aa21.39■■□□□ 1.01
TTC28-205ENST00000469670 F2P00734 622 aa21.39■■□□□ 1.01
TTC28-205ENST00000469670 AMHP03971 560 aa21.39■■□□□ 1.01
TTC28-205ENST00000469670 PTPROQ16827 1216 aa21.39■■□□□ 1.01
TTC28-205ENST00000469670 KIAA0753Q2KHM9 967 aa21.39■■□□□ 1.01
TTC28-205ENST00000469670 MYOCDQ8IZQ8 938 aa21.39■■□□□ 1.01
TTC28-205ENST00000469670 EMID1Q96A84 441 aaPredicted RBP21.39■■□□□ 1.01
TTC28-205ENST00000469670 MAF1Q9H063 256 aa21.39■■□□□ 1.01
TTC28-205ENST00000469670 COL20A1Q9P218 1284 aa21.39■■□□□ 1.01
TTC28-205ENST00000469670 DDX41Q9UJV9 622 aaKnown RBP21.39■■□□□ 1.01
TTC28-205ENST00000469670 HAS3O00219 553 aa21.38■■□□□ 1.01
TTC28-205ENST00000469670 FGAP02671 866 aa21.38■■□□□ 1.01
TTC28-205ENST00000469670 ZNF286BP0CG31 522 aa21.38■■□□□ 1.01
TTC28-205ENST00000469670 GOLGA8HP0CJ92 632 aa21.38■■□□□ 1.01
TTC28-205ENST00000469670 HTRA4P83105 476 aaPredicted RBP21.38■■□□□ 1.01
TTC28-205ENST00000469670 ZNF200P98182 395 aaPredicted RBP21.38■■□□□ 1.01
TTC28-205ENST00000469670 TIGD5Q53EQ6 642 aa21.38■■□□□ 1.01
TTC28-205ENST00000469670 GPATCH4Q5T3I0 446 aaKnown RBP21.38■■□□□ 1.01
TTC28-205ENST00000469670 DBF4BQ8NFT6 615 aa21.38■■□□□ 1.01
TTC28-205ENST00000469670 SP7Q8TDD2 431 aaPredicted RBP21.38■■□□□ 1.01
TTC28-205ENST00000469670 IWS1Q96ST2 819 aa21.38■■□□□ 1.01
TTC28-205ENST00000469670 RMDN3Q96TC7 470 aa21.38■■□□□ 1.01
TTC28-205ENST00000469670 CPVLQ9H3G5 476 aa21.38■■□□□ 1.01
TTC28-205ENST00000469670 SIP14410 1827 aa21.38■■□□□ 1.01
TTC28-205ENST00000469670 ABCB11O95342 1321 aa21.37■■□□□ 1.01
TTC28-205ENST00000469670 EMSYQ7Z589 1322 aa21.37■■□□□ 1.01
TTC28-205ENST00000469670 POTEB3A0JP26 581 aa21.37■■□□□ 1.01
TTC28-205ENST00000469670 MX1P20591 662 aa21.37■■□□□ 1.01
TTC28-205ENST00000469670 NHLH1Q02575 133 aa21.37■■□□□ 1.01
TTC28-205ENST00000469670 MKRN4PQ13434 485 aaPredicted RBP21.37■■□□□ 1.01
TTC28-205ENST00000469670 LAMC2Q13753 1193 aa21.37■■□□□ 1.01
TTC28-205ENST00000469670 EPC2Q52LR7 807 aa21.37■■□□□ 1.01
TTC28-205ENST00000469670 POTEBQ6S5H4 581 aa21.37■■□□□ 1.01
TTC28-205ENST00000469670 MIER1Q8N108 512 aa21.37■■□□□ 1.01
TTC28-205ENST00000469670 PPTC7Q8NI37 304 aa21.37■■□□□ 1.01
TTC28-205ENST00000469670 SAMD11Q96NU1 681 aa21.37■■□□□ 1.01
TTC28-205ENST00000469670 UBA5Q9GZZ9 404 aa21.37■■□□□ 1.01
TTC28-205ENST00000469670 CDC37Q16543 378 aaPredicted RBP21.36■■□□□ 1.01
TTC28-205ENST00000469670 DHX37Q8IY37 1157 aaKnown RBP21.36■■□□□ 1.01
TTC28-205ENST00000469670 BANK1Q8NDB2 785 aa21.36■■□□□ 1.01
TTC28-205ENST00000469670 PABPC5Q96DU9 382 aaKnown RBP21.36■■□□□ 1.01
TTC28-205ENST00000469670 FBXL18Q96ME1 805 aa21.36■■□□□ 1.01
TTC28-205ENST00000469670 KCNH6Q9H252 994 aa21.36■■□□□ 1.01
TTC28-205ENST00000469670 HELLSQ9NRZ9 838 aa21.36■■□□□ 1.01
TTC28-205ENST00000469670 MRVI1Q9Y6F6 885 aa21.36■■□□□ 1.01
TTC28-205ENST00000469670 EIF3JO75822 258 aaKnown RBP21.35■■□□□ 1.01
TTC28-205ENST00000469670 EIF2AK2P19525 551 aaKnown RBP21.35■■□□□ 1.01
TTC28-205ENST00000469670 GPM6BQ13491 265 aa21.35■■□□□ 1.01
TTC28-205ENST00000469670 HIC1Q14526 733 aa21.35■■□□□ 1.01
TTC28-205ENST00000469670 TCEAL5Q5H9L2 206 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms