RNA–Protein interactions for RNA: ENST00000469601.1

RTN4R-205, Transcript of reticulon 4 receptor, humanhuman

TSL 3

Gene RTN4R, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-205ENST00000469601 RXRAP19793 462 aa24.55■■□□□ 1.52
RTN4R-205ENST00000469601 LAMC2Q13753 1193 aa24.55■■□□□ 1.52
RTN4R-205ENST00000469601 APOA5Q6Q788 366 aa24.55■■□□□ 1.52
RTN4R-205ENST00000469601 TMTC3Q6ZXV5 915 aa24.55■■□□□ 1.52
RTN4R-205ENST00000469601 EMID1Q96A84 441 aaPredicted RBP24.55■■□□□ 1.52
RTN4R-205ENST00000469601 ALDH8A1Q9H2A2 487 aaPredicted RBP24.55■■□□□ 1.52
RTN4R-205ENST00000469601 TGFB3P10600 412 aa24.54■■□□□ 1.52
RTN4R-205ENST00000469601 FGD1P98174 961 aa24.54■■□□□ 1.52
RTN4R-205ENST00000469601 ARHGAP1Q07960 439 aa24.54■■□□□ 1.52
RTN4R-205ENST00000469601 ADCK5Q3MIX3 580 aa24.54■■□□□ 1.52
RTN4R-205ENST00000469601 C9orf50Q5SZB4 431 aa24.54■■□□□ 1.52
RTN4R-205ENST00000469601 NFRKBQ6P4R8 1299 aa24.54■■□□□ 1.52
RTN4R-205ENST00000469601 SMARCC2Q8TAQ2 1214 aa24.54■■□□□ 1.52
RTN4R-205ENST00000469601 AFG1LQ8WV93 481 aa24.54■■□□□ 1.52
RTN4R-205ENST00000469601 KCNB2Q92953 911 aa24.54■■□□□ 1.52
RTN4R-205ENST00000469601 HIPK3Q9H422 1215 aa24.54■■□□□ 1.52
RTN4R-205ENST00000469601 PPP4R2Q9NY27 417 aa24.54■■□□□ 1.52
RTN4R-205ENST00000469601 PIK3CDO00329 1044 aa24.53■■□□□ 1.52
RTN4R-205ENST00000469601 ZBTB43O43298 467 aa24.53■■□□□ 1.52
RTN4R-205ENST00000469601 EPB41L2O43491 1005 aaKnown RBP24.53■■□□□ 1.52
RTN4R-205ENST00000469601 CASTP20810 708 aaKnown RBP24.53■■□□□ 1.52
RTN4R-205ENST00000469601 HSPA4P34932 840 aa24.53■■□□□ 1.52
RTN4R-205ENST00000469601 PTPN11Q06124 597 aaPredicted RBP24.53■■□□□ 1.52
RTN4R-205ENST00000469601 DGKDQ16760 1214 aa24.53■■□□□ 1.52
RTN4R-205ENST00000469601 TRPV6Q9H1D0 765 aa24.53■■□□□ 1.52
RTN4R-205ENST00000469601 B4GALT4O60513 344 aa24.52■■□□□ 1.52
RTN4R-205ENST00000469601 MMP3P08254 477 aa24.52■■□□□ 1.52
RTN4R-205ENST00000469601 RCAN1P53805 252 aa24.52■■□□□ 1.52
RTN4R-205ENST00000469601 NBPF20Q3BBV1 942 aa24.52■■□□□ 1.52
RTN4R-205ENST00000469601 GNPTABQ3T906 1256 aa24.52■■□□□ 1.52
RTN4R-205ENST00000469601 XRRA1Q6P2D8 792 aa24.52■■□□□ 1.52
RTN4R-205ENST00000469601 RAB11FIP4Q86YS3 637 aa24.52■■□□□ 1.52
RTN4R-205ENST00000469601 DHX37Q8IY37 1157 aaKnown RBP24.52■■□□□ 1.52
RTN4R-205ENST00000469601 CMTR1Q8N1G2 835 aaKnown RBP24.52■■□□□ 1.52
RTN4R-205ENST00000469601 RNPC3Q96LT9 517 aaKnown RBP24.52■■□□□ 1.52
RTN4R-205ENST00000469601 PPP1R12CQ9BZL4 782 aa24.52■■□□□ 1.52
RTN4R-205ENST00000469601 PSTPIP2Q9H939 334 aa24.52■■□□□ 1.52
RTN4R-205ENST00000469601 MYH6P13533 1939 aa24.51■■□□□ 1.51
RTN4R-205ENST00000469601 CENPBP07199 599 aaPredicted RBP24.51■■□□□ 1.51
RTN4R-205ENST00000469601 RTN1Q16799 776 aa24.51■■□□□ 1.51
RTN4R-205ENST00000469601 FAM47CQ5HY64 1035 aa24.51■■□□□ 1.51
RTN4R-205ENST00000469601 CCDC82Q8N4S0 544 aa24.51■■□□□ 1.51
RTN4R-205ENST00000469601 IL31RAQ8NI17 732 aa24.51■■□□□ 1.51
RTN4R-205ENST00000469601 PPTC7Q8NI37 304 aa24.51■■□□□ 1.51
RTN4R-205ENST00000469601 TCEANC2Q96MN5 208 aa24.51■■□□□ 1.51
RTN4R-205ENST00000469601 FRMPD4Q14CM0 1322 aa24.51■■□□□ 1.51
RTN4R-205ENST00000469601 RGS20O76081 388 aa24.5■■□□□ 1.51
RTN4R-205ENST00000469601 PSMA5P28066 241 aa24.5■■□□□ 1.51
RTN4R-205ENST00000469601 EPHB4P54760 987 aa24.5■■□□□ 1.51
RTN4R-205ENST00000469601 FAM109BQ6ICB4 259 aaPredicted RBP24.5■■□□□ 1.51
RTN4R-205ENST00000469601 BLOC1S2Q6QNY1 142 aa24.5■■□□□ 1.51
RTN4R-205ENST00000469601 TEX2Q8IWB9 1127 aa24.5■■□□□ 1.51
RTN4R-205ENST00000469601 DEFB123Q8N688 67 aa24.5■■□□□ 1.51
RTN4R-205ENST00000469601 JAKMIP1Q96N16 626 aaKnown RBP24.5■■□□□ 1.51
RTN4R-205ENST00000469601 KLF18A0A0U1RQI7 1052 aa24.49■■□□□ 1.51
RTN4R-205ENST00000469601 CCDC196A0A1B0GTZ2 297 aa24.49■■□□□ 1.51
RTN4R-205ENST00000469601 MEIS2O14770 477 aa24.49■■□□□ 1.51
RTN4R-205ENST00000469601 CSF2RAP15509 400 aa24.49■■□□□ 1.51
RTN4R-205ENST00000469601 CYP2C18P33260 490 aa24.49■■□□□ 1.51
RTN4R-205ENST00000469601 SMAD3P84022 425 aaKnown RBP24.49■■□□□ 1.51
RTN4R-205ENST00000469601 PSRC1Q6PGN9 363 aaPredicted RBP24.49■■□□□ 1.51
RTN4R-205ENST00000469601 USP17L6PQ6QN14 398 aa24.49■■□□□ 1.51
RTN4R-205ENST00000469601 NOC4LQ9BVI4 516 aaKnown RBP24.49■■□□□ 1.51
RTN4R-205ENST00000469601 KATNAL1Q9BW62 490 aa24.49■■□□□ 1.51
RTN4R-205ENST00000469601 BRPF3Q9ULD4 1205 aa24.49■■□□□ 1.51
RTN4R-205ENST00000469601 SNX14Q9Y5W7 946 aa24.49■■□□□ 1.51
RTN4R-205ENST00000469601 GOLGA8AA7E2F4 631 aa24.48■■□□□ 1.51
RTN4R-205ENST00000469601 GOLGA8BA8MQT2 603 aa24.48■■□□□ 1.51
RTN4R-205ENST00000469601 CELF3Q5SZQ8 465 aaKnown RBP24.48■■□□□ 1.51
RTN4R-205ENST00000469601 PCNX4Q63HM2 1172 aa24.48■■□□□ 1.51
RTN4R-205ENST00000469601 HEATR3Q7Z4Q2 680 aa24.48■■□□□ 1.51
RTN4R-205ENST00000469601 TRMT13Q9NUP7 481 aaKnown RBP24.48■■□□□ 1.51
RTN4R-205ENST00000469601 hCG_1984214I3L0E3 225 aa24.47■■□□□ 1.51
RTN4R-205ENST00000469601 PPFIA4O75335 1185 aa24.47■■□□□ 1.51
RTN4R-205ENST00000469601 GGPS1O95749 300 aa24.47■■□□□ 1.51
RTN4R-205ENST00000469601 MYSM1Q5VVJ2 828 aa24.47■■□□□ 1.51
RTN4R-205ENST00000469601 ZNF713Q8N859 430 aaPredicted RBP24.47■■□□□ 1.51
RTN4R-205ENST00000469601 SPATA33Q96N06 139 aa24.47■■□□□ 1.51
RTN4R-205ENST00000469601 INPP4AQ96PE3 977 aaPredicted RBP24.47■■□□□ 1.51
RTN4R-205ENST00000469601 MLXIPQ9HAP2 919 aa24.47■■□□□ 1.51
RTN4R-205ENST00000469601 IL23AQ9NPF7 189 aa24.47■■□□□ 1.51
RTN4R-205ENST00000469601 NAP1L2Q9ULW6 460 aaPredicted RBP24.47■■□□□ 1.51
RTN4R-205ENST00000469601 NOD1Q9Y239 953 aa24.47■■□□□ 1.51
RTN4R-205ENST00000469601 FIBPO43427 364 aa24.46■■□□□ 1.51
RTN4R-205ENST00000469601 UBA1P22314 1058 aaKnown RBP24.46■■□□□ 1.51
RTN4R-205ENST00000469601 ICAM3P32942 547 aa24.46■■□□□ 1.51
RTN4R-205ENST00000469601 CHMP4BP1P59074 171 aa24.46■■□□□ 1.51
RTN4R-205ENST00000469601 MRPS9P82933 396 aaKnown RBP24.46■■□□□ 1.51
RTN4R-205ENST00000469601 NEDD9Q14511 834 aa24.46■■□□□ 1.51
RTN4R-205ENST00000469601 SESTD1Q86VW0 696 aa24.46■■□□□ 1.51
RTN4R-205ENST00000469601 RPUSD2Q8IZ73 545 aaKnown RBP24.46■■□□□ 1.51
RTN4R-205ENST00000469601 FBXL16Q8N461 479 aa24.46■■□□□ 1.51
RTN4R-205ENST00000469601 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.46■■□□□ 1.51
RTN4R-205ENST00000469601 MTIF3Q9H2K0 278 aaKnown RBP24.46■■□□□ 1.51
RTN4R-205ENST00000469601 EHMT1Q9H9B1 1298 aa24.46■■□□□ 1.51
RTN4R-205ENST00000469601 CNTNAP5Q8WYK1 1306 aa24.45■■□□□ 1.5
RTN4R-205ENST00000469601 hCG_1642624A0A1W2PR95 340 aa24.45■■□□□ 1.5
RTN4R-205ENST00000469601 SPDYE3A6NKU9 549 aa24.45■■□□□ 1.5
RTN4R-205ENST00000469601 HOXD8P13378 290 aaPredicted RBP24.45■■□□□ 1.5
RTN4R-205ENST00000469601 TMEM240Q5SV17 173 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms