RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 K7ELQ4 463 aaPredicted RBP8.14□□□□□ -1.11
PTCD3-208ENST00000469585 ITIH2P19823 946 aa8.14□□□□□ -1.11
PTCD3-208ENST00000469585 WDR43Q15061 677 aaKnown RBP eCLIP8.14□□□□□ -1.11
PTCD3-208ENST00000469585 LRP10Q7Z4F1 713 aa8.14□□□□□ -1.11
PTCD3-208ENST00000469585 PLD6Q8N2A8 252 aaKnown RBP8.14□□□□□ -1.11
PTCD3-208ENST00000469585 NETO1Q8TDF5 533 aa8.14□□□□□ -1.11
PTCD3-208ENST00000469585 PRDM14Q9GZV8 571 aa8.14□□□□□ -1.11
PTCD3-208ENST00000469585 KLHL25Q9H0H3 589 aa8.14□□□□□ -1.11
PTCD3-208ENST00000469585 KCNH3Q9ULD8 1083 aa8.14□□□□□ -1.11
PTCD3-208ENST00000469585 RGPD1P0DJD0 1748 aa8.14□□□□□ -1.11
PTCD3-208ENST00000469585 BRWD3Q6RI45 1802 aa8.13□□□□□ -1.11
PTCD3-208ENST00000469585 MAPK8IP3Q9UPT6 1336 aa8.13□□□□□ -1.11
PTCD3-208ENST00000469585 EPHX1P07099 455 aa8.13□□□□□ -1.11
PTCD3-208ENST00000469585 U2AF1L5P0DN76 240 aaPredicted RBP8.13□□□□□ -1.11
PTCD3-208ENST00000469585 SRFP11831 508 aa8.13□□□□□ -1.11
PTCD3-208ENST00000469585 CD247P20963 164 aa8.13□□□□□ -1.11
PTCD3-208ENST00000469585 U2AF1Q01081 240 aaKnown RBP eCLIP8.13□□□□□ -1.114e-6■■■□□ 19.2
PTCD3-208ENST00000469585 MSMPQ1L6U9 139 aa8.13□□□□□ -1.11
PTCD3-208ENST00000469585 SULT6B1Q6IMI4 303 aa8.13□□□□□ -1.11
PTCD3-208ENST00000469585 ARHGAP27Q6ZUM4 889 aa8.13□□□□□ -1.11
PTCD3-208ENST00000469585 IFNL2Q8IZJ0 200 aa8.13□□□□□ -1.11
PTCD3-208ENST00000469585 GP6Q9HCN6 339 aa8.13□□□□□ -1.11
PTCD3-208ENST00000469585 SNTG2Q9NY99 539 aa8.13□□□□□ -1.11
PTCD3-208ENST00000469585 ZNF451Q9Y4E5 1061 aa8.13□□□□□ -1.11
PTCD3-208ENST00000469585 PCDHB12Q9Y5F1 795 aa8.13□□□□□ -1.11
PTCD3-208ENST00000469585 MYBBP1AQ9BQG0 1328 aaKnown RBP8.12□□□□□ -1.11
PTCD3-208ENST00000469585 LRRC37A3O60309 1634 aa8.12□□□□□ -1.11
PTCD3-208ENST00000469585 SHISA3A0PJX4 238 aa8.12□□□□□ -1.11
PTCD3-208ENST00000469585 FAM221BA6H8Z2 402 aa8.12□□□□□ -1.11
PTCD3-208ENST00000469585 FAM155AB1AL88 458 aaPredicted RBP8.12□□□□□ -1.11
PTCD3-208ENST00000469585 PDPK1O15530 556 aa8.12□□□□□ -1.11
PTCD3-208ENST00000469585 SUSD5O60279 629 aa8.12□□□□□ -1.11
PTCD3-208ENST00000469585 ZNF143P52747 638 aaPredicted RBP8.12□□□□□ -1.11
PTCD3-208ENST00000469585 IFI16Q16666 785 aaKnown RBP8.12□□□□□ -1.11
PTCD3-208ENST00000469585 HEATR6Q6AI08 1181 aaKnown RBP8.12□□□□□ -1.11
PTCD3-208ENST00000469585 ZNF530Q6P9A1 599 aaPredicted RBP8.12□□□□□ -1.11
PTCD3-208ENST00000469585 TMC3Q7Z5M5 1100 aa8.12□□□□□ -1.11
PTCD3-208ENST00000469585 ZNF513Q8N8E2 541 aaPredicted RBP8.12□□□□□ -1.11
PTCD3-208ENST00000469585 RTF1Q92541 710 aaKnown RBP8.12□□□□□ -1.11
PTCD3-208ENST00000469585 DEPDC7Q96QD5 511 aa8.12□□□□□ -1.11
PTCD3-208ENST00000469585 GPR62Q9BZJ7 368 aa8.12□□□□□ -1.11
PTCD3-208ENST00000469585 DUSP15Q9H1R2 295 aaPredicted RBP8.12□□□□□ -1.11
PTCD3-208ENST00000469585 PIF1Q9H611 641 aa8.12□□□□□ -1.11
PTCD3-208ENST00000469585 ZSWIM4Q9H7M6 989 aa8.12□□□□□ -1.11
PTCD3-208ENST00000469585 PRR13Q9NZ81 148 aa8.12□□□□□ -1.11
PTCD3-208ENST00000469585 RNF112Q9ULX5 631 aa8.12□□□□□ -1.11
PTCD3-208ENST00000469585 WNK3Q9BYP7 1800 aa8.12□□□□□ -1.11
PTCD3-208ENST00000469585 KAT6BQ8WYB5 2073 aa8.12□□□□□ -1.11
PTCD3-208ENST00000469585 IGSF1Q8N6C5 1336 aa8.11□□□□□ -1.11
PTCD3-208ENST00000469585 ANKRD34BA5PLL1 514 aa8.11□□□□□ -1.11
PTCD3-208ENST00000469585 PPP2R1AP30153 589 aa8.11□□□□□ -1.11
PTCD3-208ENST00000469585 CLCN7P51798 805 aa8.11□□□□□ -1.11
PTCD3-208ENST00000469585 RASGRF1Q13972 1273 aa8.11□□□□□ -1.11
PTCD3-208ENST00000469585 BMS1Q14692 1282 aaKnown RBP8.11□□□□□ -1.11
PTCD3-208ENST00000469585 EEPD1Q7L9B9 569 aa8.11□□□□□ -1.11
PTCD3-208ENST00000469585 MARCH10Q8NA82 808 aaPredicted RBP8.11□□□□□ -1.11
PTCD3-208ENST00000469585 SEMA3GQ9NS98 782 aa8.11□□□□□ -1.11
PTCD3-208ENST00000469585 TMOD3Q9NYL9 352 aa8.11□□□□□ -1.11
PTCD3-208ENST00000469585 FBXL21Q9UKT6 434 aa8.11□□□□□ -1.11
PTCD3-208ENST00000469585 SNX11Q9Y5W9 270 aa8.11□□□□□ -1.11
PTCD3-208ENST00000469585 DISP2A7MBM2 1401 aa8.11□□□□□ -1.11
PTCD3-208ENST00000469585 CCDC85CA6NKD9 419 aa8.1□□□□□ -1.11
PTCD3-208ENST00000469585 HMOX1P09601 288 aa8.1□□□□□ -1.11
PTCD3-208ENST00000469585 ZNF445P59923 1031 aa8.1□□□□□ -1.11
PTCD3-208ENST00000469585 NMIQ13287 307 aaPredicted RBP8.1□□□□□ -1.11
PTCD3-208ENST00000469585 TCEAL1Q15170 157 aa8.1□□□□□ -1.11
PTCD3-208ENST00000469585 NFE2L2Q16236 605 aa8.1□□□□□ -1.11
PTCD3-208ENST00000469585 CDKAL1Q5VV42 579 aa8.1□□□□□ -1.11
PTCD3-208ENST00000469585 ST13P5Q8NFI4 369 aaPredicted RBP8.1□□□□□ -1.11
PTCD3-208ENST00000469585 HSPA12BQ96MM6 686 aa8.1□□□□□ -1.11
PTCD3-208ENST00000469585 SRPK1Q96SB4 655 aaKnown RBP8.1□□□□□ -1.11
PTCD3-208ENST00000469585 BCL9O00512 1426 aa8.1□□□□□ -1.11
PTCD3-208ENST00000469585 PEAK1Q9H792 1746 aa8.09□□□□□ -1.11
PTCD3-208ENST00000469585 TMEM265A0A087WTH1 108 aa8.09□□□□□ -1.11
PTCD3-208ENST00000469585 A0A087WZG4 1122 aa8.09□□□□□ -1.11
PTCD3-208ENST00000469585 H3BS24 57 aa8.09□□□□□ -1.11
PTCD3-208ENST00000469585 PLSCR1O15162 318 aa8.09□□□□□ -1.11
PTCD3-208ENST00000469585 SIGLEC6O43699 453 aa8.09□□□□□ -1.11
PTCD3-208ENST00000469585 ADAM23O75077 832 aa8.09□□□□□ -1.11
PTCD3-208ENST00000469585 IL13P35225 146 aa8.09□□□□□ -1.11
PTCD3-208ENST00000469585 SLC10A6Q3KNW5 377 aa8.09□□□□□ -1.11
PTCD3-208ENST00000469585 INTS5Q6P9B9 1019 aaKnown RBP8.09□□□□□ -1.11
PTCD3-208ENST00000469585 ENOX1Q8TC92 643 aaKnown RBP8.09□□□□□ -1.11
PTCD3-208ENST00000469585 FGD4Q96M96 766 aa8.09□□□□□ -1.11
PTCD3-208ENST00000469585 APBA2Q99767 749 aa8.09□□□□□ -1.11
PTCD3-208ENST00000469585 HDAC8Q9BY41 377 aa8.09□□□□□ -1.11
PTCD3-208ENST00000469585 EPN3Q9H201 632 aa8.09□□□□□ -1.11
PTCD3-208ENST00000469585 GFOD1Q9NXC2 390 aa8.09□□□□□ -1.11
PTCD3-208ENST00000469585 STK32BQ9NY57 414 aa8.09□□□□□ -1.11
PTCD3-208ENST00000469585 WHRNQ9P202 907 aa8.09□□□□□ -1.11
PTCD3-208ENST00000469585 APEX2Q9UBZ4 518 aa8.09□□□□□ -1.11
PTCD3-208ENST00000469585 MEGF6O75095 1541 aa8.08□□□□□ -1.12
PTCD3-208ENST00000469585 PITPNM2Q9BZ72 1349 aa8.08□□□□□ -1.12
PTCD3-208ENST00000469585 ERVV-2B6SEH9 535 aa8.08□□□□□ -1.12
PTCD3-208ENST00000469585 COBLO75128 1261 aa8.08□□□□□ -1.12
PTCD3-208ENST00000469585 MED26O95402 600 aa8.08□□□□□ -1.12
PTCD3-208ENST00000469585 PRAMEF1O95521 474 aa8.08□□□□□ -1.12
PTCD3-208ENST00000469585 NAT2P11245 290 aa8.08□□□□□ -1.12
PTCD3-208ENST00000469585 ITGA4P13612 1032 aa8.08□□□□□ -1.12
PTCD3-208ENST00000469585 GRIK1P39086 918 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms