RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 MFAP1P55081 439 aaKnown RBP14.33□□□□□ -0.12
HDAC3-204ENST00000469207 ZNF200P98182 395 aaPredicted RBP14.33□□□□□ -0.12
HDAC3-204ENST00000469207 PTPN11Q06124 597 aaPredicted RBP14.33□□□□□ -0.12
HDAC3-204ENST00000469207 BFSP2Q13515 415 aa14.33□□□□□ -0.12
HDAC3-204ENST00000469207 SKIV2LQ15477 1246 aaKnown RBP14.33□□□□□ -0.12
HDAC3-204ENST00000469207 STXBP2Q15833 593 aa14.33□□□□□ -0.12
HDAC3-204ENST00000469207 ARHGEF16Q5VV41 709 aa14.33□□□□□ -0.12
HDAC3-204ENST00000469207 IQCA1Q86XH1 822 aa14.33□□□□□ -0.12
HDAC3-204ENST00000469207 FBXO11Q86XK2 927 aa14.33□□□□□ -0.12
HDAC3-204ENST00000469207 HERC6Q8IVU3 1022 aa14.33□□□□□ -0.12
HDAC3-204ENST00000469207 NSUN6Q8TEA1 469 aaKnown RBP14.33□□□□□ -0.12
HDAC3-204ENST00000469207 ARNTL2Q8WYA1 636 aa14.33□□□□□ -0.12
HDAC3-204ENST00000469207 YTHDC1Q96MU7 727 aaKnown RBP14.33□□□□□ -0.12
HDAC3-204ENST00000469207 UHRF1Q96T88 793 aaPredicted RBP14.33□□□□□ -0.12
HDAC3-204ENST00000469207 ALG1Q9BT22 464 aa14.33□□□□□ -0.12
HDAC3-204ENST00000469207 OSBPL3Q9H4L5 887 aa14.33□□□□□ -0.12
HDAC3-204ENST00000469207 DIAPH3Q9NSV4 1193 aa14.33□□□□□ -0.12
HDAC3-204ENST00000469207 HDAC6Q9UBN7 1215 aa14.33□□□□□ -0.12
HDAC3-204ENST00000469207 ABCB11O95342 1321 aa14.33□□□□□ -0.12
HDAC3-204ENST00000469207 LCHNA4D1U4 455 aa14.32□□□□□ -0.12
HDAC3-204ENST00000469207 PITPNM1O00562 1244 aa14.32□□□□□ -0.12
HDAC3-204ENST00000469207 PPP1R11O60927 126 aaPredicted RBP14.32□□□□□ -0.12
HDAC3-204ENST00000469207 PARP1P09874 1014 aaKnown RBP14.32□□□□□ -0.12
HDAC3-204ENST00000469207 BMP1P13497 986 aa14.32□□□□□ -0.12
HDAC3-204ENST00000469207 COL9A1P20849 921 aa14.32□□□□□ -0.12
HDAC3-204ENST00000469207 RFC2P35250 354 aa14.32□□□□□ -0.12
HDAC3-204ENST00000469207 HIC1Q14526 733 aa14.32□□□□□ -0.12
HDAC3-204ENST00000469207 CYB5R4Q7L1T6 521 aa14.32□□□□□ -0.12
HDAC3-204ENST00000469207 WNT8BQ93098 351 aa14.32□□□□□ -0.12
HDAC3-204ENST00000469207 MRPL11Q9Y3B7 192 aaKnown RBP14.32□□□□□ -0.12
HDAC3-204ENST00000469207 PRRC2BQ5JSZ5 2229 aaKnown RBP14.31□□□□□ -0.12
HDAC3-204ENST00000469207 NBNO60934 754 aa14.31□□□□□ -0.12
HDAC3-204ENST00000469207 RGS20O76081 388 aa14.31□□□□□ -0.12
HDAC3-204ENST00000469207 NR3C2P08235 984 aa14.31□□□□□ -0.12
HDAC3-204ENST00000469207 MYCLP12524 364 aaPredicted RBP14.31□□□□□ -0.12
HDAC3-204ENST00000469207 CASTP20810 708 aaKnown RBP14.31□□□□□ -0.12
HDAC3-204ENST00000469207 HOXA13P31271 388 aaPredicted RBP14.31□□□□□ -0.12
HDAC3-204ENST00000469207 DEFB103AP81534 67 aa14.31□□□□□ -0.12
HDAC3-204ENST00000469207 IMMTQ16891 758 aaKnown RBP14.31□□□□□ -0.12
HDAC3-204ENST00000469207 SLC35G1Q2M3R5 365 aa14.31□□□□□ -0.12
HDAC3-204ENST00000469207 ASPRV1Q53RT3 343 aa14.31□□□□□ -0.12
HDAC3-204ENST00000469207 MCF2L2Q86YR7 1114 aa14.31□□□□□ -0.12
HDAC3-204ENST00000469207 PHOSPHO2Q8TCD6 241 aa14.31□□□□□ -0.12
HDAC3-204ENST00000469207 GPKOWQ92917 476 aaPredicted RBP eCLIP14.31□□□□□ -0.125e-7■■■□□ 17.4
HDAC3-204ENST00000469207 SLC9A7Q96T83 725 aa14.31□□□□□ -0.12
HDAC3-204ENST00000469207 DSCC1Q9BVC3 393 aa14.31□□□□□ -0.12
HDAC3-204ENST00000469207 BCAS3Q9H6U6 928 aa14.31□□□□□ -0.12
HDAC3-204ENST00000469207 SENP2Q9HC62 589 aa14.31□□□□□ -0.12
HDAC3-204ENST00000469207 PXMP2Q9NR77 195 aa14.31□□□□□ -0.12
HDAC3-204ENST00000469207 ZNF286BP0CG31 522 aa14.3□□□□□ -0.12
HDAC3-204ENST00000469207 CKBP12277 381 aa14.3□□□□□ -0.12
HDAC3-204ENST00000469207 PSEN2P49810 448 aa14.3□□□□□ -0.12
HDAC3-204ENST00000469207 SP2Q02086 613 aa14.3□□□□□ -0.12
HDAC3-204ENST00000469207 DGKDQ16760 1214 aa14.3□□□□□ -0.12
HDAC3-204ENST00000469207 CCDC178Q5BJE1 867 aa14.3□□□□□ -0.12
HDAC3-204ENST00000469207 IWS1Q96ST2 819 aa14.3□□□□□ -0.12
HDAC3-204ENST00000469207 GTF2IRD1Q9UHL9 959 aa14.3□□□□□ -0.12
HDAC3-204ENST00000469207 MAD2L2Q9UI95 211 aa14.3□□□□□ -0.12
HDAC3-204ENST00000469207 MRVI1Q9Y6F6 885 aa14.3□□□□□ -0.12
HDAC3-204ENST00000469207 KIF28PB7ZC32 967 aa14.29□□□□□ -0.12
HDAC3-204ENST00000469207 KLRF2D3W0D1 207 aa14.29□□□□□ -0.12
HDAC3-204ENST00000469207 TLL1O43897 1013 aa14.29□□□□□ -0.12
HDAC3-204ENST00000469207 LPXNO60711 386 aa14.29□□□□□ -0.12
HDAC3-204ENST00000469207 EIF3JO75822 258 aaKnown RBP14.29□□□□□ -0.12
HDAC3-204ENST00000469207 SELPP16109 830 aa14.29□□□□□ -0.12
HDAC3-204ENST00000469207 WDR5P61964 334 aaKnown RBP14.29□□□□□ -0.12
HDAC3-204ENST00000469207 GRB10Q13322 594 aa14.29□□□□□ -0.12
HDAC3-204ENST00000469207 MFSD10Q14728 455 aa14.29□□□□□ -0.12
HDAC3-204ENST00000469207 SEC23AQ15436 765 aa14.29□□□□□ -0.12
HDAC3-204ENST00000469207 KIAA0753Q2KHM9 967 aa14.29□□□□□ -0.12
HDAC3-204ENST00000469207 IFIT1BQ5T764 474 aaKnown RBP14.29□□□□□ -0.12
HDAC3-204ENST00000469207 FAM117BQ6P1L5 589 aa14.29□□□□□ -0.12
HDAC3-204ENST00000469207 LRRC8DQ7L1W4 858 aa14.29□□□□□ -0.12
HDAC3-204ENST00000469207 SESTD1Q86VW0 696 aa14.29□□□□□ -0.12
HDAC3-204ENST00000469207 DHX37Q8IY37 1157 aaKnown RBP14.29□□□□□ -0.12
HDAC3-204ENST00000469207 C7orf31Q8N865 590 aa14.29□□□□□ -0.12
HDAC3-204ENST00000469207 IL31RAQ8NI17 732 aa14.29□□□□□ -0.12
HDAC3-204ENST00000469207 MTUS1Q9ULD2 1270 aa14.29□□□□□ -0.12
HDAC3-204ENST00000469207 TAF6LQ9Y6J9 622 aa14.29□□□□□ -0.12
HDAC3-204ENST00000469207 PTPRSQ13332 1948 aa14.29□□□□□ -0.12
HDAC3-204ENST00000469207 MYH7BA7E2Y1 1941 aa14.28□□□□□ -0.12
HDAC3-204ENST00000469207 HAS3O00219 553 aa14.28□□□□□ -0.12
HDAC3-204ENST00000469207 GTPBP6O43824 516 aaPredicted RBP14.28□□□□□ -0.12
HDAC3-204ENST00000469207 POU3F3P20264 500 aaPredicted RBP14.28□□□□□ -0.12
HDAC3-204ENST00000469207 PDE4AP27815 886 aa14.28□□□□□ -0.12
HDAC3-204ENST00000469207 KCNJ6P48051 423 aa14.28□□□□□ -0.12
HDAC3-204ENST00000469207 HSD17B4P51659 736 aa14.28□□□□□ -0.12
HDAC3-204ENST00000469207 LAMC2Q13753 1193 aa14.28□□□□□ -0.12
HDAC3-204ENST00000469207 MBTPS1Q14703 1052 aa14.28□□□□□ -0.12
HDAC3-204ENST00000469207 HSDL1Q3SXM5 330 aa14.28□□□□□ -0.12
HDAC3-204ENST00000469207 KIAA1217Q5T5P2 1943 aa14.28□□□□□ -0.12
HDAC3-204ENST00000469207 ZNF618Q5T7W0 954 aa14.28□□□□□ -0.12
HDAC3-204ENST00000469207 MYSM1Q5VVJ2 828 aa14.28□□□□□ -0.12
HDAC3-204ENST00000469207 TRAF7Q6Q0C0 670 aa14.28□□□□□ -0.12
HDAC3-204ENST00000469207 HOMER1Q86YM7 354 aa14.28□□□□□ -0.12
HDAC3-204ENST00000469207 IL27Q8NEV9 243 aa14.28□□□□□ -0.12
HDAC3-204ENST00000469207 CAGE1Q8TC20 777 aa14.28□□□□□ -0.12
HDAC3-204ENST00000469207 AFAP1L1Q8TED9 768 aa14.28□□□□□ -0.12
HDAC3-204ENST00000469207 MTMR8Q96EF0 704 aa14.28□□□□□ -0.12
HDAC3-204ENST00000469207 PIGSQ96S52 555 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms