RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 KRT40Q6A162 431 aa14.31□□□□□ -0.12
COL5A1-207ENST00000469093 CHST3Q7LGC8 479 aa14.31□□□□□ -0.12
COL5A1-207ENST00000469093 ENAHQ8N8S7 591 aaPredicted RBP14.31□□□□□ -0.12
COL5A1-207ENST00000469093 IL27Q8NEV9 243 aa14.31□□□□□ -0.12
COL5A1-207ENST00000469093 CAGE1Q8TC20 777 aa14.31□□□□□ -0.12
COL5A1-207ENST00000469093 ARNTL2Q8WYA1 636 aa14.31□□□□□ -0.12
COL5A1-207ENST00000469093 NECAB3Q96P71 396 aaPredicted RBP14.31□□□□□ -0.12
COL5A1-207ENST00000469093 JMJD4Q9H9V9 463 aa14.31□□□□□ -0.12
COL5A1-207ENST00000469093 GTPBP6O43824 516 aaPredicted RBP14.3□□□□□ -0.12
COL5A1-207ENST00000469093 EIF3JO75822 258 aaKnown RBP14.3□□□□□ -0.12
COL5A1-207ENST00000469093 BAIAP3O94812 1187 aa14.3□□□□□ -0.12
COL5A1-207ENST00000469093 IGHDP01880 384 aa14.3□□□□□ -0.12
COL5A1-207ENST00000469093 NR3C2P08235 984 aa14.3□□□□□ -0.12
COL5A1-207ENST00000469093 PARP1P09874 1014 aaKnown RBP14.3□□□□□ -0.12
COL5A1-207ENST00000469093 ARHGEF16Q5VV41 709 aa14.3□□□□□ -0.12
COL5A1-207ENST00000469093 CHD1LQ86WJ1 897 aa14.3□□□□□ -0.12
COL5A1-207ENST00000469093 FBXO11Q86XK2 927 aa14.3□□□□□ -0.12
COL5A1-207ENST00000469093 AFAP1L1Q8TED9 768 aa14.3□□□□□ -0.12
COL5A1-207ENST00000469093 DHX38Q92620 1227 aaKnown RBP14.3□□□□□ -0.12
COL5A1-207ENST00000469093 RWDD1Q9H446 243 aaPredicted RBP14.3□□□□□ -0.12
COL5A1-207ENST00000469093 MRPL11Q9Y3B7 192 aaKnown RBP14.3□□□□□ -0.12
COL5A1-207ENST00000469093 TRIP12Q14669 1992 aaPredicted RBP14.3□□□□□ -0.12
COL5A1-207ENST00000469093 DHX16O60231 1041 aaKnown RBP14.29□□□□□ -0.12
COL5A1-207ENST00000469093 SELPP16109 830 aa14.29□□□□□ -0.12
COL5A1-207ENST00000469093 EIF2AK2P19525 551 aaKnown RBP14.29□□□□□ -0.12
COL5A1-207ENST00000469093 KCNQ1P51787 676 aa14.29□□□□□ -0.12
COL5A1-207ENST00000469093 NUCB1Q02818 461 aa14.29□□□□□ -0.12
COL5A1-207ENST00000469093 RBL2Q08999 1139 aa14.29□□□□□ -0.12
COL5A1-207ENST00000469093 AAMPQ13685 434 aa14.29□□□□□ -0.12
COL5A1-207ENST00000469093 SKIV2LQ15477 1246 aaKnown RBP14.29□□□□□ -0.12
COL5A1-207ENST00000469093 DGKDQ16760 1214 aa14.29□□□□□ -0.12
COL5A1-207ENST00000469093 AAK1Q2M2I8 961 aa14.29□□□□□ -0.12
COL5A1-207ENST00000469093 TMCO2Q7Z6W1 182 aaPredicted RBP14.29□□□□□ -0.12
COL5A1-207ENST00000469093 CCDC155Q8N6L0 562 aa14.29□□□□□ -0.12
COL5A1-207ENST00000469093 EMID1Q96A84 441 aaPredicted RBP14.29□□□□□ -0.12
COL5A1-207ENST00000469093 DSCC1Q9BVC3 393 aa14.29□□□□□ -0.12
COL5A1-207ENST00000469093 DIAPH3Q9NSV4 1193 aa14.29□□□□□ -0.12
COL5A1-207ENST00000469093 HDAC6Q9UBN7 1215 aa14.29□□□□□ -0.12
COL5A1-207ENST00000469093 GTF2IRD1Q9UHL9 959 aa14.29□□□□□ -0.12
COL5A1-207ENST00000469093 BDP1A6H8Y1 2624 aa14.28□□□□□ -0.12
COL5A1-207ENST00000469093 OPLAHO14841 1288 aa14.28□□□□□ -0.12
COL5A1-207ENST00000469093 TLL1O43897 1013 aa14.28□□□□□ -0.12
COL5A1-207ENST00000469093 LPXNO60711 386 aa14.28□□□□□ -0.12
COL5A1-207ENST00000469093 NBNO60934 754 aa14.28□□□□□ -0.12
COL5A1-207ENST00000469093 CFBP00751 764 aa14.28□□□□□ -0.12
COL5A1-207ENST00000469093 CKBP12277 381 aa14.28□□□□□ -0.12
COL5A1-207ENST00000469093 KCNJ6P48051 423 aa14.28□□□□□ -0.12
COL5A1-207ENST00000469093 GRB10Q13322 594 aa14.28□□□□□ -0.12
COL5A1-207ENST00000469093 LAMC2Q13753 1193 aa14.28□□□□□ -0.12
COL5A1-207ENST00000469093 IMMTQ16891 758 aaKnown RBP14.28□□□□□ -0.12
COL5A1-207ENST00000469093 LRRC8DQ7L1W4 858 aa14.28□□□□□ -0.12
COL5A1-207ENST00000469093 SPRED2Q7Z698 418 aa14.28□□□□□ -0.12
COL5A1-207ENST00000469093 STAG2Q8N3U4 1231 aa14.28□□□□□ -0.12
COL5A1-207ENST00000469093 C7orf31Q8N865 590 aa14.28□□□□□ -0.12
COL5A1-207ENST00000469093 AMNQ9BXJ7 453 aa14.28□□□□□ -0.12
COL5A1-207ENST00000469093 KRT23Q9C075 422 aa14.28□□□□□ -0.12
COL5A1-207ENST00000469093 PXMP2Q9NR77 195 aa14.28□□□□□ -0.12
COL5A1-207ENST00000469093 TCF20Q9UGU0 1960 aaKnown RBP14.28□□□□□ -0.12
COL5A1-207ENST00000469093 CTNNA3Q9UI47 895 aa14.28□□□□□ -0.12
COL5A1-207ENST00000469093 LCHNA4D1U4 455 aa14.27□□□□□ -0.13
COL5A1-207ENST00000469093 RBAK-RBAKDNI3L0D1 243 aa14.27□□□□□ -0.13
COL5A1-207ENST00000469093 HAS3O00219 553 aa14.27□□□□□ -0.13
COL5A1-207ENST00000469093 HIP1O00291 1037 aa14.27□□□□□ -0.13
COL5A1-207ENST00000469093 PPP1R11O60927 126 aaPredicted RBP14.27□□□□□ -0.13
COL5A1-207ENST00000469093 RGS20O76081 388 aa14.27□□□□□ -0.13
COL5A1-207ENST00000469093 PARNO95453 639 aaKnown RBP14.27□□□□□ -0.13
COL5A1-207ENST00000469093 CXCL10P02778 98 aa14.27□□□□□ -0.13
COL5A1-207ENST00000469093 PSEN2P49810 448 aa14.27□□□□□ -0.13
COL5A1-207ENST00000469093 HSD17B4P51659 736 aa14.27□□□□□ -0.13
COL5A1-207ENST00000469093 WDR5P61964 334 aaKnown RBP14.27□□□□□ -0.13
COL5A1-207ENST00000469093 GHRHRQ02643 423 aa14.27□□□□□ -0.13
COL5A1-207ENST00000469093 TCTN1Q2MV58 587 aa14.27□□□□□ -0.13
COL5A1-207ENST00000469093 TRAF7Q6Q0C0 670 aa14.27□□□□□ -0.13
COL5A1-207ENST00000469093 PPTC7Q8NI37 304 aa14.27□□□□□ -0.13
COL5A1-207ENST00000469093 MTMR8Q96EF0 704 aa14.27□□□□□ -0.13
COL5A1-207ENST00000469093 UBAC1Q9BSL1 405 aa14.27□□□□□ -0.13
COL5A1-207ENST00000469093 ALG1Q9BT22 464 aa14.27□□□□□ -0.13
COL5A1-207ENST00000469093 RAPGEFL1Q9UHV5 662 aa14.27□□□□□ -0.13
COL5A1-207ENST00000469093 MRVI1Q9Y6F6 885 aa14.27□□□□□ -0.13
COL5A1-207ENST00000469093 ABHD14A-ACY1A0A1B0GW23 586 aa14.26□□□□□ -0.13
COL5A1-207ENST00000469093 KLRF2D3W0D1 207 aa14.26□□□□□ -0.13
COL5A1-207ENST00000469093 PPFIA4O75335 1185 aa14.26□□□□□ -0.13
COL5A1-207ENST00000469093 F2P00734 622 aa14.26□□□□□ -0.13
COL5A1-207ENST00000469093 HOXD8P13378 290 aaPredicted RBP14.26□□□□□ -0.13
COL5A1-207ENST00000469093 DEFB103AP81534 67 aa14.26□□□□□ -0.13
COL5A1-207ENST00000469093 ZNF200P98182 395 aaPredicted RBP14.26□□□□□ -0.13
COL5A1-207ENST00000469093 PTK7Q13308 1070 aa14.26□□□□□ -0.13
COL5A1-207ENST00000469093 HIC1Q14526 733 aa14.26□□□□□ -0.13
COL5A1-207ENST00000469093 MFSD10Q14728 455 aa14.26□□□□□ -0.13
COL5A1-207ENST00000469093 SEC23AQ15436 765 aa14.26□□□□□ -0.13
COL5A1-207ENST00000469093 KIAA0753Q2KHM9 967 aa14.26□□□□□ -0.13
COL5A1-207ENST00000469093 TRIM71Q2Q1W2 868 aaKnown RBP14.26□□□□□ -0.13
COL5A1-207ENST00000469093 MYSM1Q5VVJ2 828 aa14.26□□□□□ -0.13
COL5A1-207ENST00000469093 CNKSR3Q6P9H4 555 aa14.26□□□□□ -0.13
COL5A1-207ENST00000469093 STOX1Q6ZVD7 989 aa14.26□□□□□ -0.13
COL5A1-207ENST00000469093 VSIG10LQ86VR7 867 aa14.26□□□□□ -0.13
COL5A1-207ENST00000469093 DHX37Q8IY37 1157 aaKnown RBP14.26□□□□□ -0.13
COL5A1-207ENST00000469093 WNT8BQ93098 351 aa14.26□□□□□ -0.13
COL5A1-207ENST00000469093 PDCD2LQ9BRP1 358 aa14.26□□□□□ -0.13
COL5A1-207ENST00000469093 ZBED2Q9BTP6 218 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms