RNA–Protein interactions for RNA: ENST00000468878.1

TRIM46-207, Transcript of tripartite motif containing 46, humanhuman

TSL 2

Gene TRIM46, Length 3,318 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-207ENST00000468878 RDH13Q8NBN7 331 aa19.35■□□□□ 0.69
TRIM46-207ENST00000468878 KBTBD4Q9NVX7 518 aa19.35■□□□□ 0.69
TRIM46-207ENST00000468878 NCK2O43639 380 aa19.35■□□□□ 0.69
TRIM46-207ENST00000468878 GRB10Q13322 594 aa19.35■□□□□ 0.69
TRIM46-207ENST00000468878 TTI2Q6NXR4 508 aa19.35■□□□□ 0.69
TRIM46-207ENST00000468878 SPZ1Q9BXG8 430 aa19.35■□□□□ 0.69
TRIM46-207ENST00000468878 IFIH1Q9BYX4 1025 aaKnown RBP19.35■□□□□ 0.69
TRIM46-207ENST00000468878 SEMA6BQ9H3T3 888 aa19.35■□□□□ 0.69
TRIM46-207ENST00000468878 PANK4Q9NVE7 773 aa19.35■□□□□ 0.69
TRIM46-207ENST00000468878 DUOX1Q9NRD9 1551 aa19.35■□□□□ 0.69
TRIM46-207ENST00000468878 TUBB4AP04350 444 aa19.35■□□□□ 0.69
TRIM46-207ENST00000468878 KCNJ6P48051 423 aa19.35■□□□□ 0.69
TRIM46-207ENST00000468878 VSNL1P62760 191 aa19.35■□□□□ 0.69
TRIM46-207ENST00000468878 RASSF7Q02833 373 aa19.35■□□□□ 0.69
TRIM46-207ENST00000468878 QRICH1Q2TAL8 776 aa19.35■□□□□ 0.69
TRIM46-207ENST00000468878 FAM114A1Q8IWE2 563 aa19.35■□□□□ 0.69
TRIM46-207ENST00000468878 CCSER1Q9C0I3 900 aa19.35■□□□□ 0.69
TRIM46-207ENST00000468878 DDTLA6NHG4 134 aaPredicted RBP19.34■□□□□ 0.69
TRIM46-207ENST00000468878 N4BP1O75113 896 aaKnown RBP19.34■□□□□ 0.69
TRIM46-207ENST00000468878 CRKP46108 304 aa19.34■□□□□ 0.69
TRIM46-207ENST00000468878 SLC7A5Q01650 507 aa19.34■□□□□ 0.69
TRIM46-207ENST00000468878 ICA1Q05084 483 aa19.34■□□□□ 0.69
TRIM46-207ENST00000468878 C2orf54Q08AI8 447 aa19.34■□□□□ 0.69
TRIM46-207ENST00000468878 BCL9LQ86UU0 1499 aa19.34■□□□□ 0.69
TRIM46-207ENST00000468878 SPDYE3A6NKU9 549 aa19.34■□□□□ 0.69
TRIM46-207ENST00000468878 ERLIN1O75477 346 aa19.34■□□□□ 0.69
TRIM46-207ENST00000468878 RHOBTB3O94955 611 aa19.34■□□□□ 0.69
TRIM46-207ENST00000468878 EIF4A3P38919 411 aaKnown RBP19.34■□□□□ 0.69
TRIM46-207ENST00000468878 POLR2FP61218 127 aaKnown RBP19.34■□□□□ 0.69
TRIM46-207ENST00000468878 KRT27Q7Z3Y8 459 aa19.34■□□□□ 0.69
TRIM46-207ENST00000468878 MMTAG2Q9BU76 263 aaKnown RBP19.34■□□□□ 0.69
TRIM46-207ENST00000468878 NDST4Q9H3R1 872 aa19.34■□□□□ 0.69
TRIM46-207ENST00000468878 CHD4Q14839 1912 aa19.34■□□□□ 0.69
TRIM46-207ENST00000468878 RCCD1A6NED2 376 aa19.33■□□□□ 0.69
TRIM46-207ENST00000468878 CLIC2O15247 247 aa19.33■□□□□ 0.69
TRIM46-207ENST00000468878 RAD17O75943 681 aa19.33■□□□□ 0.69
TRIM46-207ENST00000468878 EEF1GP26641 437 aaKnown RBP19.33■□□□□ 0.69
TRIM46-207ENST00000468878 AOC3Q16853 763 aa19.33■□□□□ 0.69
TRIM46-207ENST00000468878 SAR1BQ9Y6B6 198 aa19.33■□□□□ 0.69
TRIM46-207ENST00000468878 ECM1Q16610 540 aa19.33■□□□□ 0.69
TRIM46-207ENST00000468878 PIGOQ8TEQ8 1089 aa19.33■□□□□ 0.69
TRIM46-207ENST00000468878 ABCA3Q99758 1704 aa19.33■□□□□ 0.68
TRIM46-207ENST00000468878 GH2P01242 217 aa19.33■□□□□ 0.68
TRIM46-207ENST00000468878 NOP2P46087 812 aaKnown RBP19.33■□□□□ 0.68
TRIM46-207ENST00000468878 KRT83P78385 493 aa19.33■□□□□ 0.68
TRIM46-207ENST00000468878 RABGGTAQ92696 567 aa19.33■□□□□ 0.68
TRIM46-207ENST00000468878 MMS19Q96T76 1030 aa19.33■□□□□ 0.68
TRIM46-207ENST00000468878 FGFBP2Q9BYJ0 223 aa19.33■□□□□ 0.68
TRIM46-207ENST00000468878 HOMER2Q9NSB8 354 aa19.33■□□□□ 0.68
TRIM46-207ENST00000468878 MAGEA1P43355 309 aa19.32■□□□□ 0.68
TRIM46-207ENST00000468878 GFPT1Q06210 699 aaPredicted RBP19.32■□□□□ 0.68
TRIM46-207ENST00000468878 ZNF543Q08ER8 600 aa19.32■□□□□ 0.68
TRIM46-207ENST00000468878 GPS2Q13227 327 aa19.32■□□□□ 0.68
TRIM46-207ENST00000468878 CDC37Q16543 378 aaPredicted RBP19.32■□□□□ 0.68
TRIM46-207ENST00000468878 FAM26FQ5R3K3 315 aa19.32■□□□□ 0.68
TRIM46-207ENST00000468878 GALNT17Q6IS24 598 aa19.32■□□□□ 0.68
TRIM46-207ENST00000468878 ELOA2Q8IYF1 753 aaPredicted RBP19.32■□□□□ 0.68
TRIM46-207ENST00000468878 CYP2W1Q8TAV3 490 aa19.32■□□□□ 0.68
TRIM46-207ENST00000468878 DHTKD1Q96HY7 919 aaPredicted RBP19.32■□□□□ 0.68
TRIM46-207ENST00000468878 PACSIN2Q9UNF0 486 aaPredicted RBP19.32■□□□□ 0.68
TRIM46-207ENST00000468878 PCDHB13Q9Y5F0 798 aa19.32■□□□□ 0.68
TRIM46-207ENST00000468878 LRRC53A6NM62 1247 aa19.32■□□□□ 0.68
TRIM46-207ENST00000468878 TMCO5BA8MYB1 307 aa19.32■□□□□ 0.68
TRIM46-207ENST00000468878 PPP1R11O60927 126 aaPredicted RBP19.32■□□□□ 0.68
TRIM46-207ENST00000468878 MYOCDQ8IZQ8 938 aa19.32■□□□□ 0.68
TRIM46-207ENST00000468878 PROCA1Q8NCQ7 364 aaPredicted RBP19.32■□□□□ 0.68
TRIM46-207ENST00000468878 BCAS3Q9H6U6 928 aa19.32■□□□□ 0.68
TRIM46-207ENST00000468878 TRPC5Q9UL62 973 aaPredicted RBP19.32■□□□□ 0.68
TRIM46-207ENST00000468878 NID2Q14112 1375 aa19.32■□□□□ 0.68
TRIM46-207ENST00000468878 PNMA6FA0A0J9YX94 578 aa19.31■□□□□ 0.68
TRIM46-207ENST00000468878 USO1O60763 962 aaKnown RBP19.31■□□□□ 0.68
TRIM46-207ENST00000468878 CCDC51Q96ER9 411 aa19.31■□□□□ 0.68
TRIM46-207ENST00000468878 PBX1P40424 430 aa19.31■□□□□ 0.68
TRIM46-207ENST00000468878 ASPRV1Q53RT3 343 aa19.31■□□□□ 0.68
TRIM46-207ENST00000468878 CERS3Q8IU89 383 aa19.31■□□□□ 0.68
TRIM46-207ENST00000468878 SECISBP2LQ93073 1101 aaKnown RBP19.31■□□□□ 0.68
TRIM46-207ENST00000468878 PNMA5Q96PV4 448 aa19.31■□□□□ 0.68
TRIM46-207ENST00000468878 LSM14BQ9BX40 385 aaKnown RBP19.31■□□□□ 0.68
TRIM46-207ENST00000468878 CENPHQ9H3R5 247 aa19.31■□□□□ 0.68
TRIM46-207ENST00000468878 REXO2Q9Y3B8 237 aaKnown RBP19.31■□□□□ 0.68
TRIM46-207ENST00000468878 TBC1D8O95759 1140 aa19.31■□□□□ 0.68
TRIM46-207ENST00000468878 TRIM14Q14142 442 aa19.31■□□□□ 0.68
TRIM46-207ENST00000468878 TPH2Q8IWU9 490 aa19.31■□□□□ 0.68
TRIM46-207ENST00000468878 CPXCR1Q8N123 301 aa19.31■□□□□ 0.68
TRIM46-207ENST00000468878 RIN2Q8WYP3 895 aaPredicted RBP19.31■□□□□ 0.68
TRIM46-207ENST00000468878 THAP9Q9H5L6 903 aa19.31■□□□□ 0.68
TRIM46-207ENST00000468878 BLOC1S4Q9NUP1 217 aa19.31■□□□□ 0.68
TRIM46-207ENST00000468878 POLRMTO00411 1230 aaKnown RBP19.3■□□□□ 0.68
TRIM46-207ENST00000468878 PRPF6O94906 941 aaKnown RBP19.3■□□□□ 0.68
TRIM46-207ENST00000468878 KSR1Q8IVT5 923 aa19.3■□□□□ 0.68
TRIM46-207ENST00000468878 AK8Q96MA6 479 aa19.3■□□□□ 0.68
TRIM46-207ENST00000468878 SPAG5Q96R06 1193 aa19.3■□□□□ 0.68
TRIM46-207ENST00000468878 IKZF4Q9H2S9 585 aa19.3■□□□□ 0.68
TRIM46-207ENST00000468878 GOLPH3Q9H4A6 298 aa19.3■□□□□ 0.68
TRIM46-207ENST00000468878 CACNA1SQ13698 1873 aa19.3■□□□□ 0.68
TRIM46-207ENST00000468878 HERVK_113P62684 666 aa19.3■□□□□ 0.68
TRIM46-207ENST00000468878 WDR59Q6PJI9 974 aa19.3■□□□□ 0.68
TRIM46-207ENST00000468878 COL23A1Q86Y22 540 aaPredicted RBP19.3■□□□□ 0.68
TRIM46-207ENST00000468878 CSRNP1Q96S65 589 aa19.3■□□□□ 0.68
TRIM46-207ENST00000468878 COA1Q9GZY4 146 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms