RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 ZBTB37Q5TC79 503 aa4.99□□□□□ -1.61
TMEM39A-204ENST00000468545 LDHAL6AQ6ZMR3 332 aa4.99□□□□□ -1.61
TMEM39A-204ENST00000468545 DDX46Q7L014 1031 aaKnown RBP4.99□□□□□ -1.61
TMEM39A-204ENST00000468545 REC114Q7Z4M0 266 aa4.99□□□□□ -1.61
TMEM39A-204ENST00000468545 CHD1LQ86WJ1 897 aa4.99□□□□□ -1.61
TMEM39A-204ENST00000468545 C12orf40Q86WS4 652 aa4.99□□□□□ -1.61
TMEM39A-204ENST00000468545 FAM20CQ8IXL6 584 aa4.99□□□□□ -1.61
TMEM39A-204ENST00000468545 SMC5Q8IY18 1101 aa4.99□□□□□ -1.61
TMEM39A-204ENST00000468545 EZH1Q92800 747 aaPredicted RBP4.99□□□□□ -1.61
TMEM39A-204ENST00000468545 RPGRQ92834 1020 aaKnown RBP4.99□□□□□ -1.61
TMEM39A-204ENST00000468545 ZNF622Q969S3 477 aaKnown RBP eCLIP4.99□□□□□ -1.61
TMEM39A-204ENST00000468545 NEUROD6Q96NK8 337 aa4.99□□□□□ -1.61
TMEM39A-204ENST00000468545 MPHOSPH8Q99549 860 aa4.99□□□□□ -1.61
TMEM39A-204ENST00000468545 LRRCC1Q9C099 1032 aa4.99□□□□□ -1.61
TMEM39A-204ENST00000468545 CCDC8Q9H0W5 538 aaPredicted RBP4.99□□□□□ -1.61
TMEM39A-204ENST00000468545 ACSS3Q9H6R3 686 aa4.99□□□□□ -1.61
TMEM39A-204ENST00000468545 PICK1Q9NRD5 415 aa4.99□□□□□ -1.61
TMEM39A-204ENST00000468545 UBP1Q9NZI7 540 aa4.99□□□□□ -1.61
TMEM39A-204ENST00000468545 NUP188Q5SRE5 1749 aa4.99□□□□□ -1.61
TMEM39A-204ENST00000468545 CARMIL3Q8ND23 1372 aa4.99□□□□□ -1.61
TMEM39A-204ENST00000468545 RREB1Q92766 1687 aa4.99□□□□□ -1.61
TMEM39A-204ENST00000468545 EYA2O00167 538 aa4.98□□□□□ -1.61
TMEM39A-204ENST00000468545 TAF5LO75529 589 aa4.98□□□□□ -1.61
TMEM39A-204ENST00000468545 SASH1O94885 1247 aa4.98□□□□□ -1.61
TMEM39A-204ENST00000468545 IFIT2P09913 472 aaKnown RBP4.98□□□□□ -1.61
TMEM39A-204ENST00000468545 RAB6AP20340 208 aa4.98□□□□□ -1.61
TMEM39A-204ENST00000468545 ITGB7P26010 798 aa4.98□□□□□ -1.61
TMEM39A-204ENST00000468545 MAP4P27816 1152 aaKnown RBP4.98□□□□□ -1.61
TMEM39A-204ENST00000468545 NTF4P34130 210 aa4.98□□□□□ -1.61
TMEM39A-204ENST00000468545 CRKP46108 304 aa4.98□□□□□ -1.61
TMEM39A-204ENST00000468545 GJA8P48165 433 aa4.98□□□□□ -1.61
TMEM39A-204ENST00000468545 NUCB1Q02818 461 aa4.98□□□□□ -1.61
TMEM39A-204ENST00000468545 APOBRQ0VD83 1088 aa4.98□□□□□ -1.61
TMEM39A-204ENST00000468545 PAK2Q13177 524 aa4.98□□□□□ -1.61
TMEM39A-204ENST00000468545 MTX1Q13505 466 aa4.98□□□□□ -1.61
TMEM39A-204ENST00000468545 SF3B3Q15393 1217 aaKnown RBP4.98□□□□□ -1.61
TMEM39A-204ENST00000468545 METTL24Q5JXM2 366 aa4.98□□□□□ -1.61
TMEM39A-204ENST00000468545 CDPF1Q6NVV7 123 aa4.98□□□□□ -1.61
TMEM39A-204ENST00000468545 C2CD5Q86YS7 1000 aa4.98□□□□□ -1.61
TMEM39A-204ENST00000468545 ERC1Q8IUD2 1116 aa4.98□□□□□ -1.61
TMEM39A-204ENST00000468545 ANKRD18AQ8IVF6 992 aa4.98□□□□□ -1.61
TMEM39A-204ENST00000468545 Q8N3U1 123 aa4.98□□□□□ -1.61
TMEM39A-204ENST00000468545 FBXO27Q8NI29 283 aa4.98□□□□□ -1.61
TMEM39A-204ENST00000468545 OTUD7AQ8TE49 926 aaPredicted RBP4.98□□□□□ -1.61
TMEM39A-204ENST00000468545 CELF1Q92879 486 aaKnown RBP4.98□□□□□ -1.61
TMEM39A-204ENST00000468545 GPRASP2Q96D09 838 aa4.98□□□□□ -1.61
TMEM39A-204ENST00000468545 KIF1BPQ96EK5 621 aa4.98□□□□□ -1.61
TMEM39A-204ENST00000468545 RBM17Q96I25 401 aaKnown RBP4.98□□□□□ -1.61
TMEM39A-204ENST00000468545 EAF1Q96JC9 268 aaPredicted RBP4.98□□□□□ -1.61
TMEM39A-204ENST00000468545 SPATA32Q96LK8 384 aa4.98□□□□□ -1.61
TMEM39A-204ENST00000468545 ACBD3Q9H3P7 528 aa4.98□□□□□ -1.61
TMEM39A-204ENST00000468545 SEMA6CQ9H3T2 930 aa4.98□□□□□ -1.61
TMEM39A-204ENST00000468545 CSADQ9Y600 493 aa4.98□□□□□ -1.61
TMEM39A-204ENST00000468545 ABCC12Q96J65 1359 aa4.98□□□□□ -1.61
TMEM39A-204ENST00000468545 UBR3Q6ZT12 1888 aa4.98□□□□□ -1.61
TMEM39A-204ENST00000468545 CICQ96RK0 1608 aaPredicted RBP4.97□□□□□ -1.61
TMEM39A-204ENST00000468545 H0YIN7 160 aa4.97□□□□□ -1.61
TMEM39A-204ENST00000468545 TLR3O15455 904 aaKnown RBP4.97□□□□□ -1.61
TMEM39A-204ENST00000468545 MAP4K4O95819 1239 aaPredicted RBP4.97□□□□□ -1.61
TMEM39A-204ENST00000468545 H2AFB1P0C5Y9 115 aa4.97□□□□□ -1.61
TMEM39A-204ENST00000468545 H2AFB2P0C5Z0 115 aa4.97□□□□□ -1.61
TMEM39A-204ENST00000468545 CHRNA5P30532 468 aa4.97□□□□□ -1.61
TMEM39A-204ENST00000468545 PDE6BP35913 854 aa4.97□□□□□ -1.61
TMEM39A-204ENST00000468545 IL15P40933 162 aaPredicted RBP4.97□□□□□ -1.61
TMEM39A-204ENST00000468545 TIMM10P62072 90 aa4.97□□□□□ -1.61
TMEM39A-204ENST00000468545 RPS8P62241 208 aaKnown RBP4.97□□□□□ -1.61
TMEM39A-204ENST00000468545 PDE4BQ07343 736 aa4.97□□□□□ -1.61
TMEM39A-204ENST00000468545 MAP7Q14244 749 aa4.97□□□□□ -1.61
TMEM39A-204ENST00000468545 GORABQ5T7V8 394 aa4.97□□□□□ -1.61
TMEM39A-204ENST00000468545 TSHZ3Q63HK5 1081 aa4.97□□□□□ -1.61
TMEM39A-204ENST00000468545 PRR23CQ6ZRP0 262 aa4.97□□□□□ -1.61
TMEM39A-204ENST00000468545 BEND4Q6ZU67 534 aa4.97□□□□□ -1.61
TMEM39A-204ENST00000468545 ATG9AQ7Z3C6 839 aa4.97□□□□□ -1.61
TMEM39A-204ENST00000468545 AACSQ86V21 672 aa4.97□□□□□ -1.61
TMEM39A-204ENST00000468545 SMYD4Q8IYR2 804 aaPredicted RBP4.97□□□□□ -1.61
TMEM39A-204ENST00000468545 CLASRPQ8N2M8 674 aaKnown RBP4.97□□□□□ -1.61
TMEM39A-204ENST00000468545 KCT2Q8NC54 265 aa4.97□□□□□ -1.61
TMEM39A-204ENST00000468545 RASGRP4Q8TDF6 673 aa4.97□□□□□ -1.61
TMEM39A-204ENST00000468545 FBLIM1Q8WUP2 373 aa4.97□□□□□ -1.61
TMEM39A-204ENST00000468545 NKD1Q969G9 470 aa4.97□□□□□ -1.61
TMEM39A-204ENST00000468545 CDC5LQ99459 802 aaKnown RBP4.97□□□□□ -1.61
TMEM39A-204ENST00000468545 BRIP1Q9BX63 1249 aa4.97□□□□□ -1.61
TMEM39A-204ENST00000468545 WNT10AQ9GZT5 417 aa4.97□□□□□ -1.61
TMEM39A-204ENST00000468545 KCNF1Q9H3M0 494 aa4.97□□□□□ -1.61
TMEM39A-204ENST00000468545 INPP5FQ9Y2H2 1132 aa4.97□□□□□ -1.61
TMEM39A-204ENST00000468545 RAXQ9Y2V3 346 aa4.97□□□□□ -1.61
TMEM39A-204ENST00000468545 NOP58Q9Y2X3 529 aaKnown RBP4.97□□□□□ -1.61
TMEM39A-204ENST00000468545 IBTKQ9P2D0 1353 aaPredicted RBP4.96□□□□□ -1.62
TMEM39A-204ENST00000468545 A0A0G2JLW4 131 aa4.96□□□□□ -1.62
TMEM39A-204ENST00000468545 FAM95CA0A1B0GW59 222 aa4.96□□□□□ -1.62
TMEM39A-204ENST00000468545 SNAP23O00161 211 aa4.96□□□□□ -1.62
TMEM39A-204ENST00000468545 RNGTTO60942 597 aaKnown RBP4.96□□□□□ -1.62
TMEM39A-204ENST00000468545 GRK4P32298 578 aa4.96□□□□□ -1.62
TMEM39A-204ENST00000468545 KCNJ4P48050 445 aa4.96□□□□□ -1.62
TMEM39A-204ENST00000468545 ETF1P62495 437 aaKnown RBP4.96□□□□□ -1.62
TMEM39A-204ENST00000468545 GRAPQ13588 217 aa4.96□□□□□ -1.62
TMEM39A-204ENST00000468545 GNL2Q13823 731 aaKnown RBP4.96□□□□□ -1.62
TMEM39A-204ENST00000468545 COL9A2Q14055 689 aaPredicted RBP4.96□□□□□ -1.62
TMEM39A-204ENST00000468545 RSPO4Q2I0M5 234 aaPredicted RBP4.96□□□□□ -1.62
TMEM39A-204ENST00000468545 SEZ6Q53EL9 994 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms