RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 KIF2CQ99661 725 aa4.08□□□□□ -1.76
TRIM59-202ENST00000468542 APBA2Q99767 749 aa4.08□□□□□ -1.76
TRIM59-202ENST00000468542 NUDT12Q9BQG2 462 aa4.08□□□□□ -1.76
TRIM59-202ENST00000468542 AMNQ9BXJ7 453 aa4.08□□□□□ -1.76
TRIM59-202ENST00000468542 RNF26Q9BY78 433 aaPredicted RBP4.08□□□□□ -1.76
TRIM59-202ENST00000468542 C22orf23Q9BZE7 217 aa4.08□□□□□ -1.76
TRIM59-202ENST00000468542 UPF3BQ9BZI7 483 aaKnown RBP4.08□□□□□ -1.76
TRIM59-202ENST00000468542 GLT8D2Q9H1C3 349 aa4.08□□□□□ -1.76
TRIM59-202ENST00000468542 PORCNQ9H237 461 aa4.08□□□□□ -1.76
TRIM59-202ENST00000468542 ACAD9Q9H845 621 aa4.08□□□□□ -1.76
TRIM59-202ENST00000468542 SENP2Q9HC62 589 aa4.08□□□□□ -1.76
TRIM59-202ENST00000468542 PDRG1Q9NUG6 133 aa4.08□□□□□ -1.76
TRIM59-202ENST00000468542 SEC63Q9UGP8 760 aaKnown RBP4.08□□□□□ -1.76
TRIM59-202ENST00000468542 GJD2Q9UKL4 321 aa4.08□□□□□ -1.76
TRIM59-202ENST00000468542 BRPF3Q9ULD4 1205 aa4.08□□□□□ -1.76
TRIM59-202ENST00000468542 PTPN22Q9Y2R2 807 aa4.08□□□□□ -1.76
TRIM59-202ENST00000468542 CTDP1Q9Y5B0 961 aaPredicted RBP4.08□□□□□ -1.76
TRIM59-202ENST00000468542 CEP290O15078 2479 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 ALPK3Q96L96 1907 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 FRMPD2Q68DX3 1309 aaPredicted RBP4.07□□□□□ -1.76
TRIM59-202ENST00000468542 SYNGAP1Q96PV0 1343 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 STK36Q9NRP7 1315 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 ESYT2A0FGR8 921 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 FAM181BA6NEQ2 426 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 GOLGA8BA8MQT2 603 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 B4DLN1 442 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 J3QL48 77 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 PIK3CDO00329 1044 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 CYTH3O43739 400 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 PFKFB2O60825 505 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 HMGCRP04035 888 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 GOLGA8HP0CJ92 632 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 SNRPBP14678 240 aaKnown RBP4.07□□□□□ -1.76
TRIM59-202ENST00000468542 LORP23490 312 aaPredicted RBP4.07□□□□□ -1.76
TRIM59-202ENST00000468542 ADORA2AP29274 412 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 CTGFP29279 349 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 SLC16A2P36021 539 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 FLT3LGP49771 235 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 HSD17B4P51659 736 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 NEK4P51957 841 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 MRPL12P52815 198 aaKnown RBP4.07□□□□□ -1.76
TRIM59-202ENST00000468542 SKOR1P84550 965 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 CAP1Q01518 475 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 TRIM32Q13049 653 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 COL9A3Q14050 684 aaPredicted RBP4.07□□□□□ -1.76
TRIM59-202ENST00000468542 CDC37Q16543 378 aaPredicted RBP4.07□□□□□ -1.76
TRIM59-202ENST00000468542 QRICH1Q2TAL8 776 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 MAP3K21Q5TCX8 1036 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 MCTP2Q6DN12 878 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 TTBK2Q6IQ55 1244 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 MAMDC4Q6UXC1 1216 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 Q6ZUG5 572 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 NBPF11Q86T75 865 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 MICU3Q86XE3 530 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 NCAPG2Q86XI2 1143 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 FBXO11Q86XK2 927 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 STAG2Q8N3U4 1231 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 FAM133AQ8N9E0 248 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 DNERQ8NFT8 737 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 CD99L2Q8TCZ2 262 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 CCDC12Q8WUD4 166 aaPredicted RBP4.07□□□□□ -1.76
TRIM59-202ENST00000468542 NUP133Q8WUM0 1156 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 MRGPRX2Q96LB1 330 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 ZSCAN31Q96LW9 406 aaPredicted RBP4.07□□□□□ -1.76
TRIM59-202ENST00000468542 LLPHQ9BRT6 129 aaKnown RBP4.07□□□□□ -1.76
TRIM59-202ENST00000468542 PAGR1Q9BTK6 254 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 JMJD4Q9H9V9 463 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 RAVER2Q9HCJ3 691 aaKnown RBP4.07□□□□□ -1.76
TRIM59-202ENST00000468542 GPCPD1Q9NPB8 672 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 ATP13A2Q9NQ11 1180 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 A1CFQ9NQ94 594 aaKnown RBP4.07□□□□□ -1.76
TRIM59-202ENST00000468542 SH3GLB2Q9NR46 395 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 SH2B1Q9NRF2 756 aaPredicted RBP4.07□□□□□ -1.76
TRIM59-202ENST00000468542 RNF146Q9NTX7 359 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 FAM217BQ9NTX9 383 aaPredicted RBP4.07□□□□□ -1.76
TRIM59-202ENST00000468542 CYP39A1Q9NYL5 469 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 CCPG1Q9ULG6 757 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 MRPL11Q9Y3B7 192 aaKnown RBP4.07□□□□□ -1.76
TRIM59-202ENST00000468542 TRIM17Q9Y577 477 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 PCDHA1Q9Y5I3 950 aa4.07□□□□□ -1.76
TRIM59-202ENST00000468542 CNTNAP5Q8WYK1 1306 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 TTC24A2A3L6 582 aaPredicted RBP4.06□□□□□ -1.76
TRIM59-202ENST00000468542 ASB14A6NK59 587 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 GOLGA8AA7E2F4 631 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 CPLX1O14810 134 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 PRPF3O43395 683 aaKnown RBP4.06□□□□□ -1.76
TRIM59-202ENST00000468542 MSCO60682 206 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 STAM2O75886 525 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 PDIA4P13667 645 aaKnown RBP4.06□□□□□ -1.76
TRIM59-202ENST00000468542 CPA1P15085 419 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 EDNRBP24530 442 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 CDC27P30260 824 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 GRK4P32298 578 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 AK2P54819 239 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 PRKCZQ05513 592 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 APOBRQ0VD83 1088 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 PLS1Q14651 629 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 NTRK3Q16288 839 aa4.06□□□□□ -1.76
TRIM59-202ENST00000468542 PFKFB3Q16875 520 aaPredicted RBP4.06□□□□□ -1.76
TRIM59-202ENST00000468542 SLC35G1Q2M3R5 365 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms