RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 C2CD5Q86YS7 1000 aa17.54■□□□□ 0.4
TSPAN4-211ENST00000468468 SMCR8Q8TEV9 937 aaPredicted RBP17.54■□□□□ 0.4
TSPAN4-211ENST00000468468 TSPYL1Q9H0U9 437 aa17.54■□□□□ 0.4
TSPAN4-211ENST00000468468 BLOC1S4Q9NUP1 217 aa17.54■□□□□ 0.4
TSPAN4-211ENST00000468468 ATP6V0A2Q9Y487 856 aa17.54■□□□□ 0.4
TSPAN4-211ENST00000468468 SNED1Q8TER0 1413 aa17.54■□□□□ 0.4
TSPAN4-211ENST00000468468 MYMKA6NI61 221 aa17.54■□□□□ 0.4
TSPAN4-211ENST00000468468 F8W031 263 aaPredicted RBP17.54■□□□□ 0.4
TSPAN4-211ENST00000468468 TRIM66O15016 1216 aa17.54■□□□□ 0.4
TSPAN4-211ENST00000468468 USO1O60763 962 aaKnown RBP17.54■□□□□ 0.4
TSPAN4-211ENST00000468468 RHBDL3P58872 404 aa17.54■□□□□ 0.4
TSPAN4-211ENST00000468468 DYMQ7RTS9 669 aa17.54■□□□□ 0.4
TSPAN4-211ENST00000468468 NLGN1Q8N2Q7 840 aa17.54■□□□□ 0.4
TSPAN4-211ENST00000468468 IQCDQ96DY2 449 aa17.54■□□□□ 0.4
TSPAN4-211ENST00000468468 CEP95Q96GE4 821 aa17.54■□□□□ 0.4
TSPAN4-211ENST00000468468 NDST4Q9H3R1 872 aa17.54■□□□□ 0.4
TSPAN4-211ENST00000468468 FAM207AQ9NSI2 230 aaPredicted RBP17.54■□□□□ 0.4
TSPAN4-211ENST00000468468 HPCAL4Q9UM19 191 aa17.54■□□□□ 0.4
TSPAN4-211ENST00000468468 PLAGL2Q9UPG8 496 aa17.54■□□□□ 0.4
TSPAN4-211ENST00000468468 ANKRD31Q8N7Z5 1873 aa17.53■□□□□ 0.4
TSPAN4-211ENST00000468468 C2orf54Q08AI8 447 aa17.53■□□□□ 0.4
TSPAN4-211ENST00000468468 CALCRLQ16602 461 aa17.53■□□□□ 0.4
TSPAN4-211ENST00000468468 UNC13DQ70J99 1090 aa17.53■□□□□ 0.4
TSPAN4-211ENST00000468468 CDK5RAP3Q96JB5 506 aa17.53■□□□□ 0.4
TSPAN4-211ENST00000468468 GDAP1L1Q96MZ0 367 aa17.53■□□□□ 0.4
TSPAN4-211ENST00000468468 IFIH1Q9BYX4 1025 aaKnown RBP17.53■□□□□ 0.4
TSPAN4-211ENST00000468468 MMRN2Q9H8L6 949 aa17.53■□□□□ 0.4
TSPAN4-211ENST00000468468 FAM204AQ9H8W3 233 aa17.53■□□□□ 0.4
TSPAN4-211ENST00000468468 ARHGAP20Q9P2F6 1191 aa17.53■□□□□ 0.4
TSPAN4-211ENST00000468468 USP17L5A8MUK1 530 aa17.53■□□□□ 0.4
TSPAN4-211ENST00000468468 EPHB6O15197 1021 aa17.53■□□□□ 0.4
TSPAN4-211ENST00000468468 SYF2O95926 243 aaKnown RBP17.53■□□□□ 0.4
TSPAN4-211ENST00000468468 MMP10P09238 476 aa17.53■□□□□ 0.4
TSPAN4-211ENST00000468468 HNRNPH3P31942 346 aaKnown RBP17.53■□□□□ 0.4
TSPAN4-211ENST00000468468 AARSP49588 968 aaKnown RBP eCLIP17.53■□□□□ 0.4
TSPAN4-211ENST00000468468 PNMA5Q96PV4 448 aa17.53■□□□□ 0.4
TSPAN4-211ENST00000468468 SIK3Q9Y2K2 1263 aa17.53■□□□□ 0.4
TSPAN4-211ENST00000468468 PCDHA13Q9Y5I0 950 aa17.53■□□□□ 0.4
TSPAN4-211ENST00000468468 RNF40O75150 1001 aa17.52■□□□□ 0.4
TSPAN4-211ENST00000468468 TACC1O75410 805 aa17.52■□□□□ 0.4
TSPAN4-211ENST00000468468 SMARCA1P28370 1054 aa17.52■□□□□ 0.4
TSPAN4-211ENST00000468468 ORC2Q13416 577 aaPredicted RBP17.52■□□□□ 0.4
TSPAN4-211ENST00000468468 IQCEQ6IPM2 695 aa17.52■□□□□ 0.4
TSPAN4-211ENST00000468468 GSPT2Q8IYD1 628 aaKnown RBP17.52■□□□□ 0.4
TSPAN4-211ENST00000468468 TRIM58Q8NG06 486 aa17.52■□□□□ 0.4
TSPAN4-211ENST00000468468 COG1Q8WTW3 980 aa17.52■□□□□ 0.4
TSPAN4-211ENST00000468468 LARP4BQ92615 738 aaKnown RBP17.52■□□□□ 0.4
TSPAN4-211ENST00000468468 MTMR9Q96QG7 549 aa17.52■□□□□ 0.4
TSPAN4-211ENST00000468468 MXD3Q9BW11 206 aa17.52■□□□□ 0.4
TSPAN4-211ENST00000468468 DEF6Q9H4E7 631 aa17.52■□□□□ 0.4
TSPAN4-211ENST00000468468 STK17AQ9UEE5 414 aa17.52■□□□□ 0.4
TSPAN4-211ENST00000468468 LCMT1Q9UIC8 334 aa17.52■□□□□ 0.4
TSPAN4-211ENST00000468468 JRKLQ9Y4A0 524 aa17.52■□□□□ 0.4
TSPAN4-211ENST00000468468 PVALEFA0A1B0GWK0 134 aa17.52■□□□□ 0.4
TSPAN4-211ENST00000468468 PLSCR1O15162 318 aa17.52■□□□□ 0.4
TSPAN4-211ENST00000468468 EIF4A3P38919 411 aaKnown RBP17.52■□□□□ 0.4
TSPAN4-211ENST00000468468 DOK7Q18PE1 504 aa17.52■□□□□ 0.4
TSPAN4-211ENST00000468468 CCNI2Q6ZMN8 369 aaPredicted RBP17.52■□□□□ 0.4
TSPAN4-211ENST00000468468 MLXIPQ9HAP2 919 aa17.52■□□□□ 0.4
TSPAN4-211ENST00000468468 SNX12Q9UMY4 172 aa17.52■□□□□ 0.4
TSPAN4-211ENST00000468468 MYBL2P10244 700 aa17.51■□□□□ 0.39
TSPAN4-211ENST00000468468 KIF11P52732 1056 aa17.51■□□□□ 0.39
TSPAN4-211ENST00000468468 MAN2A1Q16706 1144 aa17.51■□□□□ 0.39
TSPAN4-211ENST00000468468 TMEM266Q2M3C6 531 aa17.51■□□□□ 0.39
TSPAN4-211ENST00000468468 GPIHBP1Q8IV16 184 aa17.51■□□□□ 0.39
TSPAN4-211ENST00000468468 C10orf67Q8IYJ2 551 aa17.51■□□□□ 0.39
TSPAN4-211ENST00000468468 TBC1D22AQ8WUA7 517 aa17.51■□□□□ 0.39
TSPAN4-211ENST00000468468 DRC1Q96MC2 740 aa17.51■□□□□ 0.39
TSPAN4-211ENST00000468468 SH2D4AQ9H788 454 aa17.51■□□□□ 0.39
TSPAN4-211ENST00000468468 CAPN6Q9Y6Q1 641 aa17.51■□□□□ 0.39
TSPAN4-211ENST00000468468 LTBP1Q14766 1721 aa17.51■□□□□ 0.39
TSPAN4-211ENST00000468468 FRMPD2Q68DX3 1309 aaPredicted RBP17.51■□□□□ 0.39
TSPAN4-211ENST00000468468 ESYT2A0FGR8 921 aa17.51■□□□□ 0.39
TSPAN4-211ENST00000468468 MOCS3O95396 460 aa17.51■□□□□ 0.39
TSPAN4-211ENST00000468468 FGFR1OPO95684 399 aaKnown RBP17.51■□□□□ 0.39
TSPAN4-211ENST00000468468 GOLGA6L1Q8N7Z2 621 aa17.51■□□□□ 0.39
TSPAN4-211ENST00000468468 COA7Q96BR5 231 aa17.51■□□□□ 0.39
TSPAN4-211ENST00000468468 DAGLAQ9Y4D2 1042 aa17.51■□□□□ 0.39
TSPAN4-211ENST00000468468 GAKO14976 1311 aa17.51■□□□□ 0.39
TSPAN4-211ENST00000468468 LRRC37AA6NMS7 1700 aa17.51■□□□□ 0.39
TSPAN4-211ENST00000468468 SLC37A4O43826 429 aa17.51■□□□□ 0.39
TSPAN4-211ENST00000468468 AKR1B10O60218 316 aa17.51■□□□□ 0.39
TSPAN4-211ENST00000468468 TDP2O95551 362 aa17.51■□□□□ 0.39
TSPAN4-211ENST00000468468 IVLP07476 585 aa17.51■□□□□ 0.39
TSPAN4-211ENST00000468468 FXR2P51116 673 aaKnown RBP eCLIP17.51■□□□□ 0.39
TSPAN4-211ENST00000468468 RRAGAQ7L523 313 aa17.51■□□□□ 0.39
TSPAN4-211ENST00000468468 CREG2Q8IUH2 290 aa17.51■□□□□ 0.39
TSPAN4-211ENST00000468468 GUF1Q8N442 669 aaKnown RBP17.51■□□□□ 0.39
TSPAN4-211ENST00000468468 CERS5Q8N5B7 392 aa17.51■□□□□ 0.39
TSPAN4-211ENST00000468468 FAM163AQ96GL9 167 aaPredicted RBP17.51■□□□□ 0.39
TSPAN4-211ENST00000468468 ZC3H12CQ9C0D7 883 aaKnown RBP17.51■□□□□ 0.39
TSPAN4-211ENST00000468468 RIOX1Q9H6W3 641 aa17.51■□□□□ 0.39
TSPAN4-211ENST00000468468 NPR1P16066 1061 aa17.5■□□□□ 0.39
TSPAN4-211ENST00000468468 ERCC3P19447 782 aa17.5■□□□□ 0.39
TSPAN4-211ENST00000468468 CCDC70Q6NSX1 233 aa17.5■□□□□ 0.39
TSPAN4-211ENST00000468468 TMC4Q7Z404 712 aa17.5■□□□□ 0.39
TSPAN4-211ENST00000468468 CCDC84Q86UT8 332 aaPredicted RBP17.5■□□□□ 0.39
TSPAN4-211ENST00000468468 HINFPQ9BQA5 517 aa17.5■□□□□ 0.39
TSPAN4-211ENST00000468468 SELENOOQ9BVL4 669 aa17.5■□□□□ 0.39
TSPAN4-211ENST00000468468 POTEMA6NI47 508 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms