RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 ELNP15502 786 aa17.32■□□□□ 0.36
SNIP1-202ENST00000468040 GRK4P32298 578 aa17.32■□□□□ 0.36
SNIP1-202ENST00000468040 DDIT3P35638 169 aa17.32■□□□□ 0.36
SNIP1-202ENST00000468040 TRAPPC10P48553 1259 aa17.32■□□□□ 0.36
SNIP1-202ENST00000468040 INF2Q27J81 1249 aa17.32■□□□□ 0.36
SNIP1-202ENST00000468040 EARS2Q5JPH6 523 aaKnown RBP17.32■□□□□ 0.36
SNIP1-202ENST00000468040 FBXO46Q6PJ61 603 aaPredicted RBP17.32■□□□□ 0.36
SNIP1-202ENST00000468040 ABHD16BQ9H3Z7 469 aa17.32■□□□□ 0.36
SNIP1-202ENST00000468040 ZSCAN16Q9H4T2 348 aaPredicted RBP17.32■□□□□ 0.36
SNIP1-202ENST00000468040 VTA1Q9NP79 307 aa17.32■□□□□ 0.36
SNIP1-202ENST00000468040 LRRC37A2A6NM11 1700 aa17.32■□□□□ 0.36
SNIP1-202ENST00000468040 SNAI1O95863 264 aaPredicted RBP17.31■□□□□ 0.36
SNIP1-202ENST00000468040 CIITAP33076 1130 aa17.31■□□□□ 0.36
SNIP1-202ENST00000468040 CYP2C19P33261 490 aa17.31■□□□□ 0.36
SNIP1-202ENST00000468040 ZNF76P36508 570 aa17.31■□□□□ 0.36
SNIP1-202ENST00000468040 NUCB2P80303 420 aa17.31■□□□□ 0.36
SNIP1-202ENST00000468040 MRPS9P82933 396 aaKnown RBP17.31■□□□□ 0.36
SNIP1-202ENST00000468040 GNPTABQ3T906 1256 aa17.31■□□□□ 0.36
SNIP1-202ENST00000468040 MOXD1Q6UVY6 613 aa17.31■□□□□ 0.36
SNIP1-202ENST00000468040 FERMT3Q86UX7 667 aa17.31■□□□□ 0.36
SNIP1-202ENST00000468040 CIZ1Q9ULV3 898 aaPredicted RBP17.31■□□□□ 0.36
SNIP1-202ENST00000468040 MYH7BA7E2Y1 1941 aa17.3■□□□□ 0.36
SNIP1-202ENST00000468040 FAM205CA6NFA0 338 aa17.3■□□□□ 0.36
SNIP1-202ENST00000468040 BRD1O95696 1058 aa17.3■□□□□ 0.36
SNIP1-202ENST00000468040 GCFC2P16383 781 aaKnown RBP17.3■□□□□ 0.36
SNIP1-202ENST00000468040 RESTQ13127 1097 aa17.3■□□□□ 0.36
SNIP1-202ENST00000468040 PKP1Q13835 747 aa17.3■□□□□ 0.36
SNIP1-202ENST00000468040 LETM2Q2VYF4 491 aa17.3■□□□□ 0.36
SNIP1-202ENST00000468040 CEP55Q53EZ4 464 aa17.3■□□□□ 0.36
SNIP1-202ENST00000468040 RILPL1Q5EBL4 403 aa17.3■□□□□ 0.36
SNIP1-202ENST00000468040 NIPA1Q7RTP0 329 aa17.3■□□□□ 0.36
SNIP1-202ENST00000468040 NLRX1Q86UT6 975 aa17.3■□□□□ 0.36
SNIP1-202ENST00000468040 DDX49Q9Y6V7 483 aaKnown RBP17.3■□□□□ 0.36
SNIP1-202ENST00000468040 CYP3A7-CYP3A51PA0A087WV96 503 aa17.29■□□□□ 0.36
SNIP1-202ENST00000468040 F13A1P00488 732 aa17.29■□□□□ 0.36
SNIP1-202ENST00000468040 CYP3A7P24462 503 aa17.29■□□□□ 0.36
SNIP1-202ENST00000468040 SETQ01105 290 aaPredicted RBP17.29■□□□□ 0.36
SNIP1-202ENST00000468040 ACVR2BQ13705 512 aa17.29■□□□□ 0.36
SNIP1-202ENST00000468040 SLC9C1Q4G0N8 1177 aa17.29■□□□□ 0.36
SNIP1-202ENST00000468040 PPP4R3AQ6IN85 833 aa17.29■□□□□ 0.36
SNIP1-202ENST00000468040 EEPD1Q7L9B9 569 aa17.29■□□□□ 0.36
SNIP1-202ENST00000468040 FBXO16Q8IX29 292 aaPredicted RBP17.29■□□□□ 0.36
SNIP1-202ENST00000468040 GPRASP2Q96D09 838 aa17.29■□□□□ 0.36
SNIP1-202ENST00000468040 CDHR1Q96JP9 859 aa17.29■□□□□ 0.36
SNIP1-202ENST00000468040 INPP4AQ96PE3 977 aaPredicted RBP17.29■□□□□ 0.36
SNIP1-202ENST00000468040 MXRA8Q9BRK3 442 aa17.29■□□□□ 0.36
SNIP1-202ENST00000468040 KATNBL1Q9H079 304 aa17.29■□□□□ 0.36
SNIP1-202ENST00000468040 JADE2Q9NQC1 790 aa17.29■□□□□ 0.36
SNIP1-202ENST00000468040 RTEL1Q9NZ71 1219 aa17.29■□□□□ 0.36
SNIP1-202ENST00000468040 ZHX1Q9UKY1 873 aaPredicted RBP17.29■□□□□ 0.36
SNIP1-202ENST00000468040 UBIAD1Q9Y5Z9 338 aa17.29■□□□□ 0.36
SNIP1-202ENST00000468040 MCM3APO60318 1980 aa17.28■□□□□ 0.36
SNIP1-202ENST00000468040 MAFGO15525 162 aa17.28■□□□□ 0.36
SNIP1-202ENST00000468040 FIBPO43427 364 aa17.28■□□□□ 0.36
SNIP1-202ENST00000468040 CCNT1O60563 726 aaKnown RBP17.28■□□□□ 0.36
SNIP1-202ENST00000468040 INHAP05111 366 aa17.28■□□□□ 0.36
SNIP1-202ENST00000468040 PRKAR2AP13861 404 aaKnown RBP17.28■□□□□ 0.36
SNIP1-202ENST00000468040 ITGB5P18084 799 aa17.28■□□□□ 0.36
SNIP1-202ENST00000468040 ORC2Q13416 577 aaPredicted RBP17.28■□□□□ 0.36
SNIP1-202ENST00000468040 MTMR1Q13613 665 aa17.28■□□□□ 0.36
SNIP1-202ENST00000468040 MAP3K21Q5TCX8 1036 aa17.28■□□□□ 0.36
SNIP1-202ENST00000468040 KCNV1Q6PIU1 500 aa17.28■□□□□ 0.36
SNIP1-202ENST00000468040 SCFD2Q8WU76 684 aa17.28■□□□□ 0.36
SNIP1-202ENST00000468040 FAM86B1E9PN63 330 aa17.27■□□□□ 0.36
SNIP1-202ENST00000468040 MEIS1O00470 390 aa17.27■□□□□ 0.36
SNIP1-202ENST00000468040 EDIL3O43854 480 aa17.27■□□□□ 0.36
SNIP1-202ENST00000468040 FAM86B2P0C5J1 330 aa17.27■□□□□ 0.36
SNIP1-202ENST00000468040 ZNF865P0CJ78 1059 aaPredicted RBP17.27■□□□□ 0.36
SNIP1-202ENST00000468040 CYBAP13498 195 aa17.27■□□□□ 0.36
SNIP1-202ENST00000468040 CACNB2Q08289 660 aaPredicted RBP17.27■□□□□ 0.36
SNIP1-202ENST00000468040 Q4G0T1 1027 aa17.27■□□□□ 0.36
SNIP1-202ENST00000468040 PRR16Q569H4 304 aa17.27■□□□□ 0.36
SNIP1-202ENST00000468040 TTC38Q5R3I4 469 aa17.27■□□□□ 0.36
SNIP1-202ENST00000468040 MYSM1Q5VVJ2 828 aa17.27■□□□□ 0.36
SNIP1-202ENST00000468040 SEPT14Q6ZU15 432 aa17.27■□□□□ 0.36
SNIP1-202ENST00000468040 ZFP91Q96JP5 570 aaPredicted RBP17.27■□□□□ 0.36
SNIP1-202ENST00000468040 MBOAT7Q96N66 472 aa17.27■□□□□ 0.36
SNIP1-202ENST00000468040 DDX25Q9UHL0 483 aaKnown RBP17.27■□□□□ 0.36
SNIP1-202ENST00000468040 ATP6V1DQ9Y5K8 247 aa17.27■□□□□ 0.36
SNIP1-202ENST00000468040 MRVI1Q9Y6F6 885 aa17.27■□□□□ 0.36
SNIP1-202ENST00000468040 IGLV3-22A0A075B6J6 115 aa17.26■□□□□ 0.35
SNIP1-202ENST00000468040 RBM47A0AV96 593 aaKnown RBP17.26■□□□□ 0.35
SNIP1-202ENST00000468040 RGS20O76081 388 aa17.26■□□□□ 0.35
SNIP1-202ENST00000468040 TDP2O95551 362 aa17.26■□□□□ 0.35
SNIP1-202ENST00000468040 TGFB3P10600 412 aa17.26■□□□□ 0.35
SNIP1-202ENST00000468040 ATP2B1P20020 1258 aa17.26■□□□□ 0.35
SNIP1-202ENST00000468040 ICAM3P32942 547 aa17.26■□□□□ 0.35
SNIP1-202ENST00000468040 TOB1P50616 345 aaPredicted RBP17.26■□□□□ 0.35
SNIP1-202ENST00000468040 TTLL4Q14679 1199 aa17.26■□□□□ 0.35
SNIP1-202ENST00000468040 PRAMEF19Q5SWL8 479 aa17.26■□□□□ 0.35
SNIP1-202ENST00000468040 FOXD4L5Q5VV16 416 aaPredicted RBP17.26■□□□□ 0.35
SNIP1-202ENST00000468040 TAPT1Q6NXT6 567 aa17.26■□□□□ 0.35
SNIP1-202ENST00000468040 PLA2G4DQ86XP0 818 aa17.26■□□□□ 0.35
SNIP1-202ENST00000468040 CYP2W1Q8TAV3 490 aa17.26■□□□□ 0.35
SNIP1-202ENST00000468040 SH3TC2Q8TF17 1288 aa17.26■□□□□ 0.35
SNIP1-202ENST00000468040 FOXD4L4Q8WXT5 416 aaPredicted RBP17.26■□□□□ 0.35
SNIP1-202ENST00000468040 WDR11Q9BZH6 1224 aa17.26■□□□□ 0.35
SNIP1-202ENST00000468040 CHMP5Q9NZZ3 219 aa17.26■□□□□ 0.35
SNIP1-202ENST00000468040 ZDHHC9Q9Y397 364 aa17.26■□□□□ 0.35
SNIP1-202ENST00000468040 KIAA1217Q5T5P2 1943 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms