RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 RGS20O76081 388 aa20.95■□□□□ 0.94
CGREF1-208ENST00000467539 TGFB3P10600 412 aa20.95■□□□□ 0.94
CGREF1-208ENST00000467539 PSMC6P62333 389 aa20.95■□□□□ 0.94
CGREF1-208ENST00000467539 SHHQ15465 462 aa20.95■□□□□ 0.94
CGREF1-208ENST00000467539 MFSD5Q6N075 450 aa20.95■□□□□ 0.94
CGREF1-208ENST00000467539 RAB11FIP4Q86YS3 637 aa20.95■□□□□ 0.94
CGREF1-208ENST00000467539 CCDC82Q8N4S0 544 aa20.95■□□□□ 0.94
CGREF1-208ENST00000467539 TCEANC2Q96MN5 208 aa20.95■□□□□ 0.94
CGREF1-208ENST00000467539 RBM28Q9NW13 759 aaKnown RBP20.95■□□□□ 0.94
CGREF1-208ENST00000467539 PIK3CDO00329 1044 aa20.94■□□□□ 0.94
CGREF1-208ENST00000467539 ZBTB43O43298 467 aa20.94■□□□□ 0.94
CGREF1-208ENST00000467539 CCND2P30279 289 aa20.94■□□□□ 0.94
CGREF1-208ENST00000467539 ARHGAP1Q07960 439 aa20.94■□□□□ 0.94
CGREF1-208ENST00000467539 LAMC2Q13753 1193 aa20.94■□□□□ 0.94
CGREF1-208ENST00000467539 MICU3Q86XE3 530 aa20.94■□□□□ 0.94
CGREF1-208ENST00000467539 EMID1Q96A84 441 aaPredicted RBP20.94■□□□□ 0.94
CGREF1-208ENST00000467539 MRVI1Q9Y6F6 885 aa20.94■□□□□ 0.94
CGREF1-208ENST00000467539 MEIS2O14770 477 aa20.93■□□□□ 0.94
CGREF1-208ENST00000467539 CENPBP07199 599 aaPredicted RBP20.93■□□□□ 0.94
CGREF1-208ENST00000467539 RCAN1P53805 252 aa20.93■□□□□ 0.94
CGREF1-208ENST00000467539 FPGSQ05932 587 aa20.93■□□□□ 0.94
CGREF1-208ENST00000467539 FBXL16Q8N461 479 aa20.93■□□□□ 0.94
CGREF1-208ENST00000467539 AFG1LQ8WV93 481 aa20.93■□□□□ 0.94
CGREF1-208ENST00000467539 CUL5Q93034 780 aa20.93■□□□□ 0.94
CGREF1-208ENST00000467539 TRPV6Q9H1D0 765 aa20.93■□□□□ 0.94
CGREF1-208ENST00000467539 LAMA3Q16787 3333 aa20.93■□□□□ 0.94
CGREF1-208ENST00000467539 STAM2O75886 525 aa20.92■□□□□ 0.94
CGREF1-208ENST00000467539 CASTP20810 708 aaKnown RBP20.92■□□□□ 0.94
CGREF1-208ENST00000467539 EPHB4P54760 987 aa20.92■□□□□ 0.94
CGREF1-208ENST00000467539 FUT2Q10981 343 aa20.92■□□□□ 0.94
CGREF1-208ENST00000467539 NBPF20Q3BBV1 942 aa20.92■□□□□ 0.94
CGREF1-208ENST00000467539 C9orf50Q5SZB4 431 aa20.92■□□□□ 0.94
CGREF1-208ENST00000467539 USP17L6PQ6QN14 398 aa20.92■□□□□ 0.94
CGREF1-208ENST00000467539 DHX37Q8IY37 1157 aaKnown RBP20.92■□□□□ 0.94
CGREF1-208ENST00000467539 IL31RAQ8NI17 732 aa20.92■□□□□ 0.94
CGREF1-208ENST00000467539 SMARCC2Q8TAQ2 1214 aa20.92■□□□□ 0.94
CGREF1-208ENST00000467539 JAKMIP1Q96N16 626 aaKnown RBP20.92■□□□□ 0.94
CGREF1-208ENST00000467539 ALDH8A1Q9H2A2 487 aaPredicted RBP20.92■□□□□ 0.94
CGREF1-208ENST00000467539 PSTPIP2Q9H939 334 aa20.92■□□□□ 0.94
CGREF1-208ENST00000467539 KLF18A0A0U1RQI7 1052 aa20.91■□□□□ 0.94
CGREF1-208ENST00000467539 hCG_1642624A0A1W2PR95 340 aa20.91■□□□□ 0.94
CGREF1-208ENST00000467539 B4GALT4O60513 344 aa20.91■□□□□ 0.94
CGREF1-208ENST00000467539 SUPT20HL2P0C7V6 817 aa20.91■□□□□ 0.94
CGREF1-208ENST00000467539 CPA1P15085 419 aa20.91■□□□□ 0.94
CGREF1-208ENST00000467539 PSMA5P28066 241 aa20.91■□□□□ 0.94
CGREF1-208ENST00000467539 MRPS9P82933 396 aaKnown RBP20.91■□□□□ 0.94
CGREF1-208ENST00000467539 PTPN11Q06124 597 aaPredicted RBP20.91■□□□□ 0.94
CGREF1-208ENST00000467539 LTBP2Q14767 1821 aa20.91■□□□□ 0.94
CGREF1-208ENST00000467539 FRMPD4Q14CM0 1322 aa20.91■□□□□ 0.94
CGREF1-208ENST00000467539 RTN1Q16799 776 aa20.91■□□□□ 0.94
CGREF1-208ENST00000467539 MYSM1Q5VVJ2 828 aa20.91■□□□□ 0.94
CGREF1-208ENST00000467539 XRRA1Q6P2D8 792 aa20.91■□□□□ 0.94
CGREF1-208ENST00000467539 NFRKBQ6P4R8 1299 aa20.91■□□□□ 0.94
CGREF1-208ENST00000467539 BLOC1S2Q6QNY1 142 aa20.91■□□□□ 0.94
CGREF1-208ENST00000467539 TMEM199Q8N511 208 aa20.91■□□□□ 0.94
CGREF1-208ENST00000467539 USP26Q9BXU7 913 aa20.91■□□□□ 0.94
CGREF1-208ENST00000467539 FAM217BQ9NTX9 383 aaPredicted RBP20.91■□□□□ 0.94
CGREF1-208ENST00000467539 PPFIA4O75335 1185 aa20.9■□□□□ 0.94
CGREF1-208ENST00000467539 MMP3P08254 477 aa20.9■□□□□ 0.94
CGREF1-208ENST00000467539 ICAM3P32942 547 aa20.9■□□□□ 0.94
CGREF1-208ENST00000467539 FGD1P98174 961 aa20.9■□□□□ 0.94
CGREF1-208ENST00000467539 SP2Q02086 613 aa20.9■□□□□ 0.94
CGREF1-208ENST00000467539 DGKDQ16760 1214 aa20.9■□□□□ 0.94
CGREF1-208ENST00000467539 CELF3Q5SZQ8 465 aaKnown RBP20.9■□□□□ 0.94
CGREF1-208ENST00000467539 Q6ZUG5 572 aa20.9■□□□□ 0.94
CGREF1-208ENST00000467539 V9GY48 417 aaPredicted RBP20.9■□□□□ 0.94
CGREF1-208ENST00000467539 RPS6KB1P23443 525 aa20.89■□□□□ 0.93
CGREF1-208ENST00000467539 PPIGQ13427 754 aaKnown RBP eCLIP20.89■□□□□ 0.93
CGREF1-208ENST00000467539 C16orf59Q7L2K0 433 aa20.89■□□□□ 0.93
CGREF1-208ENST00000467539 PPTC7Q8NI37 304 aa20.89■□□□□ 0.93
CGREF1-208ENST00000467539 ZFP91Q96JP5 570 aaPredicted RBP20.89■□□□□ 0.93
CGREF1-208ENST00000467539 INPP4AQ96PE3 977 aaPredicted RBP20.89■□□□□ 0.93
CGREF1-208ENST00000467539 AGXT2Q9BYV1 514 aa20.89■□□□□ 0.93
CGREF1-208ENST00000467539 HIPK3Q9H422 1215 aa20.89■□□□□ 0.93
CGREF1-208ENST00000467539 KIAA1217Q5T5P2 1943 aa20.88■□□□□ 0.93
CGREF1-208ENST00000467539 GOLGA8AA7E2F4 631 aa20.88■□□□□ 0.93
CGREF1-208ENST00000467539 GOLGA8BA8MQT2 603 aa20.88■□□□□ 0.93
CGREF1-208ENST00000467539 SPATA31C2B4DYI2 1134 aa20.88■□□□□ 0.93
CGREF1-208ENST00000467539 CDC27P30260 824 aa20.88■□□□□ 0.93
CGREF1-208ENST00000467539 CYP2C18P33260 490 aa20.88■□□□□ 0.93
CGREF1-208ENST00000467539 ADD1P35611 737 aaKnown RBP20.88■□□□□ 0.93
CGREF1-208ENST00000467539 GNPTABQ3T906 1256 aa20.88■□□□□ 0.93
CGREF1-208ENST00000467539 PCNX4Q63HM2 1172 aa20.88■□□□□ 0.93
CGREF1-208ENST00000467539 TEX2Q8IWB9 1127 aa20.88■□□□□ 0.93
CGREF1-208ENST00000467539 KAT2BQ92831 832 aa20.88■□□□□ 0.93
CGREF1-208ENST00000467539 NOC4LQ9BVI4 516 aaKnown RBP20.88■□□□□ 0.93
CGREF1-208ENST00000467539 PPP1R12CQ9BZL4 782 aa20.88■□□□□ 0.93
CGREF1-208ENST00000467539 CCDC196A0A1B0GTZ2 297 aa20.87■□□□□ 0.93
CGREF1-208ENST00000467539 HOXD8P13378 290 aaPredicted RBP20.87■□□□□ 0.93
CGREF1-208ENST00000467539 CSF2RAP15509 400 aa20.87■□□□□ 0.93
CGREF1-208ENST00000467539 APOBRQ0VD83 1088 aa20.87■□□□□ 0.93
CGREF1-208ENST00000467539 HEATR3Q7Z4Q2 680 aa20.87■□□□□ 0.93
CGREF1-208ENST00000467539 BRF1Q92994 677 aa20.87■□□□□ 0.93
CGREF1-208ENST00000467539 TRMT13Q9NUP7 481 aaKnown RBP20.87■□□□□ 0.93
CGREF1-208ENST00000467539 RTEL1Q9NZ71 1219 aa20.87■□□□□ 0.93
CGREF1-208ENST00000467539 CNTNAP5Q8WYK1 1306 aa20.86■□□□□ 0.93
CGREF1-208ENST00000467539 GGPS1O95749 300 aa20.86■□□□□ 0.93
CGREF1-208ENST00000467539 HSDL1Q3SXM5 330 aa20.86■□□□□ 0.93
CGREF1-208ENST00000467539 FAM47CQ5HY64 1035 aa20.86■□□□□ 0.93
CGREF1-208ENST00000467539 TMEM240Q5SV17 173 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms