RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 FZD5Q13467 585 aa5.9□□□□□ -1.46
SMC4-208ENST00000467468 SLC9A5Q14940 896 aa5.9□□□□□ -1.46
SMC4-208ENST00000467468 TESK1Q15569 626 aa5.9□□□□□ -1.46
SMC4-208ENST00000467468 C16orf86Q6ZW13 317 aa5.9□□□□□ -1.46
SMC4-208ENST00000467468 LDHDQ86WU2 507 aa5.9□□□□□ -1.46
SMC4-208ENST00000467468 TMEM151BQ8IW70 566 aa5.9□□□□□ -1.46
SMC4-208ENST00000467468 AP5M1Q9H0R1 490 aa5.9□□□□□ -1.46
SMC4-208ENST00000467468 SPC25Q9HBM1 224 aa5.9□□□□□ -1.46
SMC4-208ENST00000467468 BTG4Q9NY30 223 aa5.9□□□□□ -1.46
SMC4-208ENST00000467468 COL4A3BPQ9Y5P4 624 aa5.9□□□□□ -1.46
SMC4-208ENST00000467468 PPP1R12AO14974 1030 aaPredicted RBP5.89□□□□□ -1.47
SMC4-208ENST00000467468 CDR1P51861 262 aa5.89□□□□□ -1.47
SMC4-208ENST00000467468 EPHB3P54753 998 aa5.89□□□□□ -1.47
SMC4-208ENST00000467468 ANAPC15P60006 121 aa5.89□□□□□ -1.47
SMC4-208ENST00000467468 PRR5P85299 388 aa5.89□□□□□ -1.47
SMC4-208ENST00000467468 PRSS53Q2L4Q9 553 aa5.89□□□□□ -1.47
SMC4-208ENST00000467468 MROH9Q5TGP6 573 aa5.89□□□□□ -1.47
SMC4-208ENST00000467468 MBLAC2Q68D91 279 aa5.89□□□□□ -1.47
SMC4-208ENST00000467468 TMEM145Q8NBT3 493 aa5.89□□□□□ -1.47
SMC4-208ENST00000467468 ALG3Q92685 438 aa5.89□□□□□ -1.47
SMC4-208ENST00000467468 TSPAN17Q96FV3 270 aa5.89□□□□□ -1.47
SMC4-208ENST00000467468 FEZ1Q99689 392 aa5.89□□□□□ -1.47
SMC4-208ENST00000467468 IER2Q9BTL4 223 aa5.89□□□□□ -1.47
SMC4-208ENST00000467468 RNF38Q9H0F5 515 aa5.89□□□□□ -1.47
SMC4-208ENST00000467468 COA3Q9Y2R0 106 aaPredicted RBP5.89□□□□□ -1.47
SMC4-208ENST00000467468 KCTD3Q9Y597 815 aa5.89□□□□□ -1.47
SMC4-208ENST00000467468 TRAV20A0A0B4J274 112 aa5.88□□□□□ -1.47
SMC4-208ENST00000467468 BTBD11A6QL63 1104 aa5.88□□□□□ -1.47
SMC4-208ENST00000467468 DIAPH1O60610 1272 aaKnown RBP5.88□□□□□ -1.47
SMC4-208ENST00000467468 RAB11FIP3O75154 756 aa5.88□□□□□ -1.47
SMC4-208ENST00000467468 FGFR1P11362 822 aa5.88□□□□□ -1.47
SMC4-208ENST00000467468 CFPP27918 469 aa5.88□□□□□ -1.47
SMC4-208ENST00000467468 CYP4F3Q08477 520 aa5.88□□□□□ -1.47
SMC4-208ENST00000467468 SF1Q15637 639 aaKnown RBP5.88□□□□□ -1.47
SMC4-208ENST00000467468 INF2Q27J81 1249 aa5.88□□□□□ -1.47
SMC4-208ENST00000467468 TAF7LQ5H9L4 462 aa5.88□□□□□ -1.47
SMC4-208ENST00000467468 SLC35F1Q5T1Q4 408 aa5.88□□□□□ -1.47
SMC4-208ENST00000467468 TEX2Q8IWB9 1127 aa5.88□□□□□ -1.47
SMC4-208ENST00000467468 KREMEN2Q8NCW0 462 aa5.88□□□□□ -1.47
SMC4-208ENST00000467468 TRMT2BQ96GJ1 504 aaKnown RBP5.88□□□□□ -1.47
SMC4-208ENST00000467468 CHAMP1Q96JM3 812 aa5.88□□□□□ -1.47
SMC4-208ENST00000467468 IPO9Q96P70 1041 aaKnown RBP5.88□□□□□ -1.47
SMC4-208ENST00000467468 PCDH12Q9NPG4 1184 aa5.88□□□□□ -1.47
SMC4-208ENST00000467468 FAN1Q9Y2M0 1017 aa5.88□□□□□ -1.47
SMC4-208ENST00000467468 PCDHA5Q9Y5H7 936 aa5.88□□□□□ -1.47
SMC4-208ENST00000467468 KDM2BQ8NHM5 1336 aa5.88□□□□□ -1.47
SMC4-208ENST00000467468 ARID1BQ8NFD5 2236 aaPredicted RBP5.88□□□□□ -1.47
SMC4-208ENST00000467468 C22orf46C9J442 243 aa5.87□□□□□ -1.47
SMC4-208ENST00000467468 IRS4O14654 1257 aaPredicted RBP5.87□□□□□ -1.47
SMC4-208ENST00000467468 GYS2P54840 703 aa5.87□□□□□ -1.47
SMC4-208ENST00000467468 SSRP1Q08945 709 aaKnown RBP5.87□□□□□ -1.47
SMC4-208ENST00000467468 LSAMPQ13449 338 aa5.87□□□□□ -1.47
SMC4-208ENST00000467468 CHRNA2Q15822 529 aa5.87□□□□□ -1.47
SMC4-208ENST00000467468 TCERG1LQ5VWI1 586 aa5.87□□□□□ -1.47
SMC4-208ENST00000467468 SPATC1Q76KD6 591 aa5.87□□□□□ -1.47
SMC4-208ENST00000467468 RIOX2Q8IUF8 465 aa5.87□□□□□ -1.47
SMC4-208ENST00000467468 CILP2Q8IUL8 1156 aa5.87□□□□□ -1.47
SMC4-208ENST00000467468 SIAH1Q8IUQ4 282 aa5.87□□□□□ -1.47
SMC4-208ENST00000467468 CCDC103Q8IW40 242 aa5.87□□□□□ -1.47
SMC4-208ENST00000467468 SYNPOQ8N3V7 929 aa5.87□□□□□ -1.47
SMC4-208ENST00000467468 PLEKHO2Q8TD55 490 aa5.87□□□□□ -1.47
SMC4-208ENST00000467468 SEC14L1Q92503 715 aa5.87□□□□□ -1.47
SMC4-208ENST00000467468 DPF3Q92784 378 aa5.87□□□□□ -1.47
SMC4-208ENST00000467468 C1orf159Q96HA4 380 aa5.87□□□□□ -1.47
SMC4-208ENST00000467468 TMEM169Q96HH4 297 aa5.87□□□□□ -1.47
SMC4-208ENST00000467468 SPATA9Q9BWV2 254 aa5.87□□□□□ -1.47
SMC4-208ENST00000467468 ARHGEF4Q9NR80 690 aa5.87□□□□□ -1.47
SMC4-208ENST00000467468 PFDN2Q9UHV9 154 aa5.87□□□□□ -1.47
SMC4-208ENST00000467468 PTCH2Q9Y6C5 1203 aa5.87□□□□□ -1.47
SMC4-208ENST00000467468 IRS2Q9Y4H2 1338 aa5.86□□□□□ -1.47
SMC4-208ENST00000467468 H7BY64 318 aa5.86□□□□□ -1.47
SMC4-208ENST00000467468 PRODHO43272 600 aa5.86□□□□□ -1.47
SMC4-208ENST00000467468 BUB1BO60566 1050 aaPredicted RBP5.86□□□□□ -1.47
SMC4-208ENST00000467468 PPP1R11O60927 126 aaPredicted RBP5.86□□□□□ -1.47
SMC4-208ENST00000467468 NTRK1P04629 796 aa5.86□□□□□ -1.47
SMC4-208ENST00000467468 NCAM1P13591 858 aa5.86□□□□□ -1.47
SMC4-208ENST00000467468 PI3P19957 117 aa5.86□□□□□ -1.47
SMC4-208ENST00000467468 BCL6P41182 706 aa5.86□□□□□ -1.47
SMC4-208ENST00000467468 GRIA2P42262 883 aa5.86□□□□□ -1.47
SMC4-208ENST00000467468 SLC6A11P48066 632 aa5.86□□□□□ -1.47
SMC4-208ENST00000467468 CNKSR3Q6P9H4 555 aa5.86□□□□□ -1.47
SMC4-208ENST00000467468 RSPO2Q6UXX9 243 aaPredicted RBP5.86□□□□□ -1.47
SMC4-208ENST00000467468 NSMFQ6X4W1 530 aa5.86□□□□□ -1.47
SMC4-208ENST00000467468 USP53Q70EK8 1073 aa5.86□□□□□ -1.47
SMC4-208ENST00000467468 CEP68Q76N32 757 aa5.86□□□□□ -1.47
SMC4-208ENST00000467468 IGDCC3Q8IVU1 814 aa5.86□□□□□ -1.47
SMC4-208ENST00000467468 Q8N1Y9 231 aa5.86□□□□□ -1.47
SMC4-208ENST00000467468 RCBTB1Q8NDN9 531 aa5.86□□□□□ -1.47
SMC4-208ENST00000467468 IRF2BPLQ9H1B7 796 aa5.86□□□□□ -1.47
SMC4-208ENST00000467468 GPR27Q9NS67 375 aa5.86□□□□□ -1.47
SMC4-208ENST00000467468 FBLN5Q9UBX5 448 aa5.86□□□□□ -1.47
SMC4-208ENST00000467468 TMEFF2Q9UIK5 374 aaPredicted RBP5.86□□□□□ -1.47
SMC4-208ENST00000467468 PCDHA2Q9Y5H9 948 aa5.86□□□□□ -1.47
SMC4-208ENST00000467468 DLX3O60479 287 aa5.85□□□□□ -1.47
SMC4-208ENST00000467468 CAPNS1P04632 268 aa5.85□□□□□ -1.47
SMC4-208ENST00000467468 ZSCAN22P10073 491 aaPredicted RBP5.85□□□□□ -1.47
SMC4-208ENST00000467468 PABPC1P11940 636 aaKnown RBP5.85□□□□□ -1.47
SMC4-208ENST00000467468 FPR2P25090 351 aa5.85□□□□□ -1.47
SMC4-208ENST00000467468 NCKAP1LP55160 1127 aa5.85□□□□□ -1.47
SMC4-208ENST00000467468 SSPNQ14714 243 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms