RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 CNTD1Q8N815 330 aa5.57□□□□□ -1.52
VPS13A-209ENST00000467124 CCDC120Q96HB5 630 aa5.57□□□□□ -1.52
VPS13A-209ENST00000467124 CHMP4AQ9BY43 222 aa5.57□□□□□ -1.52
VPS13A-209ENST00000467124 IFT22Q9H7X7 185 aa5.57□□□□□ -1.52
VPS13A-209ENST00000467124 VTA1Q9NP79 307 aa5.57□□□□□ -1.52
VPS13A-209ENST00000467124 CATSPERZQ9NTU4 200 aa5.57□□□□□ -1.52
VPS13A-209ENST00000467124 SPTLC3Q9NUV7 552 aa5.57□□□□□ -1.52
VPS13A-209ENST00000467124 CLDND1Q9NY35 253 aa5.57□□□□□ -1.52
VPS13A-209ENST00000467124 GULP1Q9UBP9 304 aa5.57□□□□□ -1.52
VPS13A-209ENST00000467124 TCEAL9Q9UHQ7 104 aa5.57□□□□□ -1.52
VPS13A-209ENST00000467124 TRHDEQ9UKU6 1024 aa5.57□□□□□ -1.52
VPS13A-209ENST00000467124 CBLCQ9ULV8 474 aa5.57□□□□□ -1.52
VPS13A-209ENST00000467124 C7orf72A4D263 438 aa5.56□□□□□ -1.52
VPS13A-209ENST00000467124 FKBP9O95302 570 aa5.56□□□□□ -1.52
VPS13A-209ENST00000467124 ATP2A2P16615 1042 aaKnown RBP5.56□□□□□ -1.52
VPS13A-209ENST00000467124 BPIP17213 487 aa5.56□□□□□ -1.52
VPS13A-209ENST00000467124 FPR2P25090 351 aa5.56□□□□□ -1.52
VPS13A-209ENST00000467124 GRK2P25098 689 aa5.56□□□□□ -1.52
VPS13A-209ENST00000467124 PMLP29590 882 aa5.56□□□□□ -1.52
VPS13A-209ENST00000467124 GRK3P35626 688 aa5.56□□□□□ -1.52
VPS13A-209ENST00000467124 GTF2A2P52657 109 aa5.56□□□□□ -1.52
VPS13A-209ENST00000467124 ST5P78524 1137 aa5.56□□□□□ -1.52
VPS13A-209ENST00000467124 IKZF1Q13422 519 aa5.56□□□□□ -1.52
VPS13A-209ENST00000467124 AOC3Q16853 763 aa5.56□□□□□ -1.52
VPS13A-209ENST00000467124 ABCB5Q2M3G0 1257 aa5.56□□□□□ -1.52
VPS13A-209ENST00000467124 HSP90AB2PQ58FF8 381 aa5.56□□□□□ -1.52
VPS13A-209ENST00000467124 FKBP9P1Q75LS8 142 aa5.56□□□□□ -1.52
VPS13A-209ENST00000467124 HDGFL2Q7Z4V5 671 aaPredicted RBP5.56□□□□□ -1.52
VPS13A-209ENST00000467124 SPATS2Q86XZ4 545 aaKnown RBP5.56□□□□□ -1.52
VPS13A-209ENST00000467124 TEX2Q8IWB9 1127 aa5.56□□□□□ -1.52
VPS13A-209ENST00000467124 TMEM52Q8NDY8 209 aa5.56□□□□□ -1.52
VPS13A-209ENST00000467124 DPF3Q92784 378 aa5.56□□□□□ -1.52
VPS13A-209ENST00000467124 ZKSCAN5Q9Y2L8 839 aa5.56□□□□□ -1.52
VPS13A-209ENST00000467124 SHTN1A0MZ66 631 aa5.55□□□□□ -1.52
VPS13A-209ENST00000467124 PTPDC1A2A3K4 754 aa5.55□□□□□ -1.52
VPS13A-209ENST00000467124 KIAA1324LA8MWY0 1029 aaPredicted RBP5.55□□□□□ -1.52
VPS13A-209ENST00000467124 MYO1BO43795 1136 aa5.55□□□□□ -1.52
VPS13A-209ENST00000467124 GAS7O60861 476 aa5.55□□□□□ -1.52
VPS13A-209ENST00000467124 PRKD3O94806 890 aa5.55□□□□□ -1.52
VPS13A-209ENST00000467124 NPTXRO95502 500 aa5.55□□□□□ -1.52
VPS13A-209ENST00000467124 F2P00734 622 aa5.55□□□□□ -1.52
VPS13A-209ENST00000467124 HOXA10P31260 410 aaPredicted RBP5.55□□□□□ -1.52
VPS13A-209ENST00000467124 RAB27AP51159 221 aa5.55□□□□□ -1.52
VPS13A-209ENST00000467124 DSG1Q02413 1049 aa5.55□□□□□ -1.52
VPS13A-209ENST00000467124 BNIP3Q12983 259 aa5.55□□□□□ -1.52
VPS13A-209ENST00000467124 KIZQ2M2Z5 673 aa5.55□□□□□ -1.52
VPS13A-209ENST00000467124 ATP13A4Q4VNC1 1196 aa5.55□□□□□ -1.52
VPS13A-209ENST00000467124 RNF219Q5W0B1 726 aaPredicted RBP5.55□□□□□ -1.52
VPS13A-209ENST00000467124 IQSEC1Q6DN90 963 aa5.55□□□□□ -1.52
VPS13A-209ENST00000467124 FSTL4Q6MZW2 842 aa5.55□□□□□ -1.52
VPS13A-209ENST00000467124 OVCH1Q7RTY7 1134 aa5.55□□□□□ -1.52
VPS13A-209ENST00000467124 NLRP10Q86W26 655 aa5.55□□□□□ -1.52
VPS13A-209ENST00000467124 ANKLE2Q86XL3 938 aa5.55□□□□□ -1.52
VPS13A-209ENST00000467124 SMC1BQ8NDV3 1235 aa5.55□□□□□ -1.52
VPS13A-209ENST00000467124 PANK1Q8TE04 598 aa5.55□□□□□ -1.52
VPS13A-209ENST00000467124 FBXW5Q969U6 566 aa5.55□□□□□ -1.52
VPS13A-209ENST00000467124 MS4A5Q9H3V2 200 aa5.55□□□□□ -1.52
VPS13A-209ENST00000467124 CABP5Q9NP86 173 aa5.55□□□□□ -1.52
VPS13A-209ENST00000467124 AASDHPPTQ9NRN7 309 aa5.55□□□□□ -1.52
VPS13A-209ENST00000467124 ERVK13-1Q9NX77 482 aa5.55□□□□□ -1.52
VPS13A-209ENST00000467124 MARCH2Q9P0N8 246 aa5.55□□□□□ -1.52
VPS13A-209ENST00000467124 TNFRSF10DQ9UBN6 386 aa5.55□□□□□ -1.52
VPS13A-209ENST00000467124 NOB1Q9ULX3 412 aaKnown RBP5.55□□□□□ -1.52
VPS13A-209ENST00000467124 SLC5A6Q9Y289 635 aa5.55□□□□□ -1.52
VPS13A-209ENST00000467124 FAN1Q9Y2M0 1017 aa5.55□□□□□ -1.52
VPS13A-209ENST00000467124 TIMM13Q9Y5L4 95 aaPredicted RBP5.55□□□□□ -1.52
VPS13A-209ENST00000467124 FAM47E-STBD1D6RA91 191 aa5.54□□□□□ -1.52
VPS13A-209ENST00000467124 BRINP1O60477 761 aa5.54□□□□□ -1.52
VPS13A-209ENST00000467124 PPP1R11O60927 126 aaPredicted RBP5.54□□□□□ -1.52
VPS13A-209ENST00000467124 MT-CO1P00395 513 aa5.54□□□□□ -1.52
VPS13A-209ENST00000467124 KIR2DL1P43626 348 aaPredicted RBP5.54□□□□□ -1.52
VPS13A-209ENST00000467124 KIR2DL2P43627 348 aaPredicted RBP5.54□□□□□ -1.52
VPS13A-209ENST00000467124 CD97P48960 835 aa5.54□□□□□ -1.52
VPS13A-209ENST00000467124 CORO7P57737 925 aa5.54□□□□□ -1.52
VPS13A-209ENST00000467124 RPL11P62913 178 aaKnown RBP5.54□□□□□ -1.52
VPS13A-209ENST00000467124 MCL1Q07820 350 aa5.54□□□□□ -1.52
VPS13A-209ENST00000467124 LSAMPQ13449 338 aa5.54□□□□□ -1.52
VPS13A-209ENST00000467124 HLA-DQA1Q5Y7H0 255 aa5.54□□□□□ -1.52
VPS13A-209ENST00000467124 CEP68Q76N32 757 aa5.54□□□□□ -1.52
VPS13A-209ENST00000467124 OSTM1Q86WC4 334 aa5.54□□□□□ -1.52
VPS13A-209ENST00000467124 DTX1Q86Y01 620 aa5.54□□□□□ -1.52
VPS13A-209ENST00000467124 C2orf69Q8N8R5 385 aa5.54□□□□□ -1.52
VPS13A-209ENST00000467124 CHST14Q8NCH0 376 aa5.54□□□□□ -1.52
VPS13A-209ENST00000467124 BCL7CQ8WUZ0 217 aaPredicted RBP5.54□□□□□ -1.52
VPS13A-209ENST00000467124 CELF4Q9BZC1 486 aaKnown RBP5.54□□□□□ -1.52
VPS13A-209ENST00000467124 SEMA6BQ9H3T3 888 aa5.54□□□□□ -1.52
VPS13A-209ENST00000467124 EMC7Q9NPA0 242 aa5.54□□□□□ -1.52
VPS13A-209ENST00000467124 SLC52A1Q9NWF4 448 aa5.54□□□□□ -1.52
VPS13A-209ENST00000467124 RWDD3Q9Y3V2 267 aa5.54□□□□□ -1.52
VPS13A-209ENST00000467124 LCHNA4D1U4 455 aa5.53□□□□□ -1.52
VPS13A-209ENST00000467124 WTIPA6NIX2 430 aaPredicted RBP5.53□□□□□ -1.52
VPS13A-209ENST00000467124 GABRDO14764 452 aa5.53□□□□□ -1.52
VPS13A-209ENST00000467124 WNT9AO14904 365 aa5.53□□□□□ -1.52
VPS13A-209ENST00000467124 NPHS1O60500 1241 aa5.53□□□□□ -1.52
VPS13A-209ENST00000467124 SCGB1D2O95969 90 aa5.53□□□□□ -1.52
VPS13A-209ENST00000467124 FUCA1P04066 466 aa5.53□□□□□ -1.52
VPS13A-209ENST00000467124 PDE6AP16499 860 aa5.53□□□□□ -1.52
VPS13A-209ENST00000467124 SPINK2P20155 84 aa5.53□□□□□ -1.52
VPS13A-209ENST00000467124 TACR1P25103 407 aa5.53□□□□□ -1.52
VPS13A-209ENST00000467124 IARSP41252 1262 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms