RNA–Protein interactions for RNA: ENST00000466939.1

LAMP3-202, Transcript of lysosomal associated membrane protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LAMP3, Length 1,453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP3-202ENST00000466939 CT47A1Q5JQC4 288 aaPredicted RBP13.67□□□□□ -0.22
LAMP3-202ENST00000466939 KLHL10Q6JEL2 608 aa13.67□□□□□ -0.22
LAMP3-202ENST00000466939 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.67□□□□□ -0.22
LAMP3-202ENST00000466939 SV2BQ7L1I2 683 aa13.67□□□□□ -0.22
LAMP3-202ENST00000466939 TRMT44Q8IYL2 757 aaKnown RBP13.67□□□□□ -0.22
LAMP3-202ENST00000466939 ERMNQ8TAM6 284 aa13.67□□□□□ -0.22
LAMP3-202ENST00000466939 ETNPPLQ8TBG4 499 aa13.67□□□□□ -0.22
LAMP3-202ENST00000466939 RBM46Q8TBY0 533 aaKnown RBP13.67□□□□□ -0.22
LAMP3-202ENST00000466939 ZC3H15Q8WU90 426 aaKnown RBP13.67□□□□□ -0.22
LAMP3-202ENST00000466939 CLEC4DQ8WXI8 215 aa13.67□□□□□ -0.22
LAMP3-202ENST00000466939 FAM20AQ96MK3 541 aa13.67□□□□□ -0.22
LAMP3-202ENST00000466939 PHIPQ8WWQ0 1821 aa13.66□□□□□ -0.22
LAMP3-202ENST00000466939 SYNRGQ9UMZ2 1314 aa13.66□□□□□ -0.22
LAMP3-202ENST00000466939 IQCA1LA6NCM1 817 aa13.66□□□□□ -0.22
LAMP3-202ENST00000466939 ESPNB1AK53 854 aa13.66□□□□□ -0.22
LAMP3-202ENST00000466939 MSH4O15457 936 aa13.66□□□□□ -0.22
LAMP3-202ENST00000466939 SLC26A4O43511 780 aa13.66□□□□□ -0.22
LAMP3-202ENST00000466939 STAT3P40763 770 aa13.66□□□□□ -0.22
LAMP3-202ENST00000466939 ASIC1P78348 528 aa13.66□□□□□ -0.22
LAMP3-202ENST00000466939 FMR1Q06787 632 aaKnown RBP eCLIP13.66□□□□□ -0.22
LAMP3-202ENST00000466939 COG2Q14746 738 aa13.66□□□□□ -0.22
LAMP3-202ENST00000466939 NCAPH2Q6IBW4 605 aa13.66□□□□□ -0.22
LAMP3-202ENST00000466939 ZSCAN30Q86W11 494 aa13.66□□□□□ -0.22
LAMP3-202ENST00000466939 SMYD4Q8IYR2 804 aaPredicted RBP13.66□□□□□ -0.22
LAMP3-202ENST00000466939 ENOX1Q8TC92 643 aaKnown RBP13.66□□□□□ -0.22
LAMP3-202ENST00000466939 LRRC15Q8TF66 581 aa13.66□□□□□ -0.22
LAMP3-202ENST00000466939 LARP4BQ92615 738 aaKnown RBP13.66□□□□□ -0.22
LAMP3-202ENST00000466939 RAD54LQ92698 747 aa13.66□□□□□ -0.22
LAMP3-202ENST00000466939 LENG9Q96B70 501 aa13.66□□□□□ -0.22
LAMP3-202ENST00000466939 MRFAP1L1Q96HT8 127 aa13.66□□□□□ -0.22
LAMP3-202ENST00000466939 NUDT12Q9BQG2 462 aa13.66□□□□□ -0.22
LAMP3-202ENST00000466939 NT5C3AQ9H0P0 336 aa13.66□□□□□ -0.22
LAMP3-202ENST00000466939 ELP3Q9H9T3 547 aa13.66□□□□□ -0.22
LAMP3-202ENST00000466939 RABGAP1Q9Y3P9 1069 aa13.66□□□□□ -0.22
LAMP3-202ENST00000466939 STK24Q9Y6E0 443 aa13.66□□□□□ -0.22
LAMP3-202ENST00000466939 POLR2AP24928 1970 aaKnown RBP13.65□□□□□ -0.22
LAMP3-202ENST00000466939 TPM3P06753 285 aa13.65□□□□□ -0.22
LAMP3-202ENST00000466939 MCM6Q14566 821 aa13.65□□□□□ -0.22
LAMP3-202ENST00000466939 KCNB1Q14721 858 aa13.65□□□□□ -0.22
LAMP3-202ENST00000466939 KMT5BQ4FZB7 885 aa13.65□□□□□ -0.22
LAMP3-202ENST00000466939 MUM1L1Q5H9M0 696 aa13.65□□□□□ -0.22
LAMP3-202ENST00000466939 SH3D19Q5HYK7 790 aa13.65□□□□□ -0.22
LAMP3-202ENST00000466939 ZNF658Q5TYW1 1059 aaPredicted RBP13.65□□□□□ -0.22
LAMP3-202ENST00000466939 HAUS3Q68CZ6 603 aa13.65□□□□□ -0.22
LAMP3-202ENST00000466939 CATSPERGQ6ZRH7 1159 aa13.65□□□□□ -0.22
LAMP3-202ENST00000466939 SAMD3Q8N6K7 520 aa13.65□□□□□ -0.22
LAMP3-202ENST00000466939 TRERF1Q96PN7 1200 aa13.65□□□□□ -0.22
LAMP3-202ENST00000466939 C7orf25Q9BPX7 421 aa13.65□□□□□ -0.22
LAMP3-202ENST00000466939 LRRC27Q9C0I9 530 aa13.65□□□□□ -0.22
LAMP3-202ENST00000466939 RNF146Q9NTX7 359 aa13.65□□□□□ -0.22
LAMP3-202ENST00000466939 EXOC1Q9NV70 894 aa13.65□□□□□ -0.22
LAMP3-202ENST00000466939 FANCLQ9NW38 375 aa13.65□□□□□ -0.22
LAMP3-202ENST00000466939 CTNND2Q9UQB3 1225 aa13.65□□□□□ -0.22
LAMP3-202ENST00000466939 NFE2L3Q9Y4A8 694 aa13.65□□□□□ -0.22
LAMP3-202ENST00000466939 IGLV3-22A0A075B6J6 115 aa13.64□□□□□ -0.23
LAMP3-202ENST00000466939 CD44P16070 742 aaKnown RBP13.64□□□□□ -0.23
LAMP3-202ENST00000466939 MSNP26038 577 aaKnown RBP13.64□□□□□ -0.23
LAMP3-202ENST00000466939 OAZ1P54368 228 aa13.64□□□□□ -0.23
LAMP3-202ENST00000466939 FANCCQ00597 558 aa13.64□□□□□ -0.23
LAMP3-202ENST00000466939 SETQ01105 290 aaPredicted RBP13.64□□□□□ -0.23
LAMP3-202ENST00000466939 SNRNP48Q6IEG0 339 aaKnown RBP13.64□□□□□ -0.23
LAMP3-202ENST00000466939 NSMFQ6X4W1 530 aa13.64□□□□□ -0.23
LAMP3-202ENST00000466939 FAM43AQ8N2R8 423 aa13.64□□□□□ -0.23
LAMP3-202ENST00000466939 CYP2W1Q8TAV3 490 aa13.64□□□□□ -0.23
LAMP3-202ENST00000466939 WNK4Q96J92 1243 aa13.64□□□□□ -0.23
LAMP3-202ENST00000466939 TRIM9Q9C026 710 aa13.64□□□□□ -0.23
LAMP3-202ENST00000466939 TAF1DQ9H5J8 278 aaPredicted RBP13.64□□□□□ -0.23
LAMP3-202ENST00000466939 BLOC1S4Q9NUP1 217 aa13.64□□□□□ -0.23
LAMP3-202ENST00000466939 IFNKQ9P0W0 207 aa13.64□□□□□ -0.23
LAMP3-202ENST00000466939 GDAQ9Y2T3 454 aa13.64□□□□□ -0.23
LAMP3-202ENST00000466939 OTOFQ9HC10 1997 aa13.64□□□□□ -0.23
LAMP3-202ENST00000466939 RBBP6Q7Z6E9 1792 aaKnown RBP13.64□□□□□ -0.23
LAMP3-202ENST00000466939 PAPPA2Q9BXP8 1791 aa13.64□□□□□ -0.23
LAMP3-202ENST00000466939 WDR90Q96KV7 1748 aa13.63□□□□□ -0.23
LAMP3-202ENST00000466939 SMCHD1A6NHR9 2005 aa13.63□□□□□ -0.23
LAMP3-202ENST00000466939 RPTORQ8N122 1335 aa13.63□□□□□ -0.23
LAMP3-202ENST00000466939 PPP1R3GB7ZBB8 358 aa13.63□□□□□ -0.23
LAMP3-202ENST00000466939 CBFA2T2O43439 604 aa13.63□□□□□ -0.23
LAMP3-202ENST00000466939 KLRC4O43908 158 aa13.63□□□□□ -0.23
LAMP3-202ENST00000466939 SERPINC1P01008 464 aa13.63□□□□□ -0.23
LAMP3-202ENST00000466939 SSBP05455 408 aaKnown RBP eCLIP13.63□□□□□ -0.23
LAMP3-202ENST00000466939 STX17P56962 302 aa13.63□□□□□ -0.23
LAMP3-202ENST00000466939 GHRHRQ02643 423 aa13.63□□□□□ -0.23
LAMP3-202ENST00000466939 SEMA3FQ13275 785 aa13.63□□□□□ -0.23
LAMP3-202ENST00000466939 STIM1Q13586 685 aa13.63□□□□□ -0.23
LAMP3-202ENST00000466939 TPD52L1Q16890 204 aaPredicted RBP13.63□□□□□ -0.23
LAMP3-202ENST00000466939 CEP55Q53EZ4 464 aa13.63□□□□□ -0.23
LAMP3-202ENST00000466939 HYIQ5T013 277 aa13.63□□□□□ -0.23
LAMP3-202ENST00000466939 SLC30A10Q6XR72 485 aa13.63□□□□□ -0.23
LAMP3-202ENST00000466939 GADL1Q6ZQY3 521 aa13.63□□□□□ -0.23
LAMP3-202ENST00000466939 RNF207Q6ZRF8 634 aa13.63□□□□□ -0.23
LAMP3-202ENST00000466939 ANKRD13AQ8IZ07 590 aa13.63□□□□□ -0.23
LAMP3-202ENST00000466939 SYTL5Q8TDW5 730 aaPredicted RBP13.63□□□□□ -0.23
LAMP3-202ENST00000466939 OTUD5Q96G74 571 aa13.63□□□□□ -0.23
LAMP3-202ENST00000466939 GTPBP4Q9BZE4 634 aaKnown RBP13.63□□□□□ -0.23
LAMP3-202ENST00000466939 MAP3K20Q9NYL2 800 aaKnown RBP13.63□□□□□ -0.23
LAMP3-202ENST00000466939 COL20A1Q9P218 1284 aa13.63□□□□□ -0.23
LAMP3-202ENST00000466939 KIAA1024Q9UPX6 916 aa13.63□□□□□ -0.23
LAMP3-202ENST00000466939 MYPNQ86TC9 1320 aa13.62□□□□□ -0.23
LAMP3-202ENST00000466939 PARP14Q460N5 1801 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms