RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 PRSS53Q2L4Q9 553 aa5.09□□□□□ -1.59
GTF3C3-209ENST00000466862 TNNI3KQ59H18 835 aa5.09□□□□□ -1.59
GTF3C3-209ENST00000466862 PRR31Q5SQ13 230 aa5.09□□□□□ -1.59
GTF3C3-209ENST00000466862 DENND5AQ6IQ26 1287 aa5.09□□□□□ -1.59
GTF3C3-209ENST00000466862 ETV3LQ6ZN32 361 aa5.09□□□□□ -1.59
GTF3C3-209ENST00000466862 PRRT2Q7Z6L0 340 aaPredicted RBP5.09□□□□□ -1.59
GTF3C3-209ENST00000466862 FAM126BQ8IXS8 530 aa5.09□□□□□ -1.59
GTF3C3-209ENST00000466862 FAM26EQ8N5C1 309 aa5.09□□□□□ -1.59
GTF3C3-209ENST00000466862 SEC14L1Q92503 715 aa5.09□□□□□ -1.59
GTF3C3-209ENST00000466862 ZBTB8AQ96BR9 441 aa5.09□□□□□ -1.59
GTF3C3-209ENST00000466862 NTMQ9P121 344 aa5.09□□□□□ -1.59
GTF3C3-209ENST00000466862 CNOT11Q9UKZ1 510 aaKnown RBP5.09□□□□□ -1.59
GTF3C3-209ENST00000466862 MRVI1Q9Y6F6 885 aa5.09□□□□□ -1.59
GTF3C3-209ENST00000466862 C22orf46C9J442 243 aa5.08□□□□□ -1.6
GTF3C3-209ENST00000466862 NOP56O00567 594 aaKnown RBP5.08□□□□□ -1.6
GTF3C3-209ENST00000466862 ETFBP38117 255 aa5.08□□□□□ -1.6
GTF3C3-209ENST00000466862 MROH9Q5TGP6 573 aa5.08□□□□□ -1.6
GTF3C3-209ENST00000466862 ADAMTS17Q8TE56 1095 aa5.08□□□□□ -1.6
GTF3C3-209ENST00000466862 C11orf84Q9BUA3 381 aaPredicted RBP5.08□□□□□ -1.6
GTF3C3-209ENST00000466862 ZNF408Q9H9D4 720 aa5.08□□□□□ -1.6
GTF3C3-209ENST00000466862 CAPN10Q9HC96 672 aa5.08□□□□□ -1.6
GTF3C3-209ENST00000466862 ZNF652Q9Y2D9 606 aa5.08□□□□□ -1.6
GTF3C3-209ENST00000466862 SNRPB2P08579 225 aaKnown RBP5.07□□□□□ -1.6
GTF3C3-209ENST00000466862 ADRB1P08588 477 aa5.07□□□□□ -1.6
GTF3C3-209ENST00000466862 ERCC5P28715 1186 aaPredicted RBP5.07□□□□□ -1.6
GTF3C3-209ENST00000466862 HOXC12P31275 282 aa5.07□□□□□ -1.6
GTF3C3-209ENST00000466862 ITGA1P56199 1179 aa5.07□□□□□ -1.6
GTF3C3-209ENST00000466862 RPL11P62913 178 aaKnown RBP5.07□□□□□ -1.6
GTF3C3-209ENST00000466862 SMAD4Q13485 552 aaKnown RBP5.07□□□□□ -1.6
GTF3C3-209ENST00000466862 CR1LQ2VPA4 569 aa5.07□□□□□ -1.6
GTF3C3-209ENST00000466862 SLC10A6Q3KNW5 377 aa5.07□□□□□ -1.6
GTF3C3-209ENST00000466862 EMC4Q5J8M3 183 aa5.07□□□□□ -1.6
GTF3C3-209ENST00000466862 SLC35F1Q5T1Q4 408 aa5.07□□□□□ -1.6
GTF3C3-209ENST00000466862 LARP1BQ659C4 914 aaKnown RBP5.07□□□□□ -1.6
GTF3C3-209ENST00000466862 RCBTB1Q8NDN9 531 aa5.07□□□□□ -1.6
GTF3C3-209ENST00000466862 USP33Q8TEY7 942 aa5.07□□□□□ -1.6
GTF3C3-209ENST00000466862 DIO2Q92813 273 aa5.07□□□□□ -1.6
GTF3C3-209ENST00000466862 RBM15Q96T37 977 aaKnown RBP eCLIP5.07□□□□□ -1.6
GTF3C3-209ENST00000466862 KRTAP3-1Q9BYR8 98 aa5.07□□□□□ -1.6
GTF3C3-209ENST00000466862 AP5M1Q9H0R1 490 aa5.07□□□□□ -1.6
GTF3C3-209ENST00000466862 CDIP1Q9H305 208 aa5.07□□□□□ -1.6
GTF3C3-209ENST00000466862 PALD1Q9ULE6 856 aa5.07□□□□□ -1.6
GTF3C3-209ENST00000466862 NPFFR2Q9Y5X5 522 aa5.07□□□□□ -1.6
GTF3C3-209ENST00000466862 MEFVO15553 781 aaPredicted RBP5.06□□□□□ -1.6
GTF3C3-209ENST00000466862 LCP1P13796 627 aa5.06□□□□□ -1.6
GTF3C3-209ENST00000466862 TCF3P15923 654 aa5.06□□□□□ -1.6
GTF3C3-209ENST00000466862 RPL13P26373 211 aaKnown RBP5.06□□□□□ -1.6
GTF3C3-209ENST00000466862 BCL6P41182 706 aa5.06□□□□□ -1.6
GTF3C3-209ENST00000466862 SARSP49591 514 aaKnown RBP5.06□□□□□ -1.6
GTF3C3-209ENST00000466862 GJA9P57773 515 aa5.06□□□□□ -1.6
GTF3C3-209ENST00000466862 ADAM9Q13443 819 aa5.06□□□□□ -1.6
GTF3C3-209ENST00000466862 SPATS1Q496A3 300 aa5.06□□□□□ -1.6
GTF3C3-209ENST00000466862 IQCEQ6IPM2 695 aa5.06□□□□□ -1.6
GTF3C3-209ENST00000466862 FERMT3Q86UX7 667 aa5.06□□□□□ -1.6
GTF3C3-209ENST00000466862 MCF2L2Q86YR7 1114 aa5.06□□□□□ -1.6
GTF3C3-209ENST00000466862 PPIL6Q8IXY8 311 aa5.06□□□□□ -1.6
GTF3C3-209ENST00000466862 KYQ8NBH2 561 aa5.06□□□□□ -1.6
GTF3C3-209ENST00000466862 TMEM145Q8NBT3 493 aa5.06□□□□□ -1.6
GTF3C3-209ENST00000466862 PPP1R14AQ96A00 147 aa5.06□□□□□ -1.6
GTF3C3-209ENST00000466862 USP40Q9NVE5 1235 aa5.06□□□□□ -1.6
GTF3C3-209ENST00000466862 BTG4Q9NY30 223 aa5.06□□□□□ -1.6
GTF3C3-209ENST00000466862 TIMM13Q9Y5L4 95 aaPredicted RBP5.06□□□□□ -1.6
GTF3C3-209ENST00000466862 GJB6O95452 261 aa5.05□□□□□ -1.6
GTF3C3-209ENST00000466862 SSBP05455 408 aaKnown RBP eCLIP5.05□□□□□ -1.6
GTF3C3-209ENST00000466862 CNR2P34972 360 aa5.05□□□□□ -1.6
GTF3C3-209ENST00000466862 LTBRP36941 435 aa5.05□□□□□ -1.6
GTF3C3-209ENST00000466862 ECI1P42126 302 aa5.05□□□□□ -1.6
GTF3C3-209ENST00000466862 ERICH6BQ5W0A0 696 aa5.05□□□□□ -1.6
GTF3C3-209ENST00000466862 HHIPL2Q6UWX4 724 aa5.05□□□□□ -1.6
GTF3C3-209ENST00000466862 PCDH18Q9HCL0 1135 aa5.05□□□□□ -1.6
GTF3C3-209ENST00000466862 H7BY64 318 aa5.04□□□□□ -1.6
GTF3C3-209ENST00000466862 CPP00450 1065 aa5.04□□□□□ -1.6
GTF3C3-209ENST00000466862 ITGB3P05106 788 aa5.04□□□□□ -1.6
GTF3C3-209ENST00000466862 ZNF28P17035 718 aa5.04□□□□□ -1.6
GTF3C3-209ENST00000466862 GRIA2P42262 883 aa5.04□□□□□ -1.6
GTF3C3-209ENST00000466862 GTF2A2P52657 109 aa5.04□□□□□ -1.6
GTF3C3-209ENST00000466862 PLP2Q04941 152 aa5.04□□□□□ -1.6
GTF3C3-209ENST00000466862 FXNQ16595 210 aa5.04□□□□□ -1.6
GTF3C3-209ENST00000466862 SV2CQ496J9 727 aa5.04□□□□□ -1.6
GTF3C3-209ENST00000466862 FAM26FQ5R3K3 315 aa5.04□□□□□ -1.6
GTF3C3-209ENST00000466862 CELF2-AS1Q8N7Q2 184 aa5.04□□□□□ -1.6
GTF3C3-209ENST00000466862 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.04□□□□□ -1.6
GTF3C3-209ENST00000466862 SSBP3Q9BWW4 388 aaPredicted RBP5.04□□□□□ -1.6
GTF3C3-209ENST00000466862 EPN3Q9H201 632 aa5.04□□□□□ -1.6
GTF3C3-209ENST00000466862 TCRBV5S2A0A599 114 aa5.03□□□□□ -1.6
GTF3C3-209ENST00000466862 K7ESM1 405 aa5.03□□□□□ -1.6
GTF3C3-209ENST00000466862 SMARCA5O60264 1052 aaPredicted RBP5.03□□□□□ -1.6
GTF3C3-209ENST00000466862 TADA3O75528 432 aa5.03□□□□□ -1.6
GTF3C3-209ENST00000466862 STAT5AP42229 794 aa5.03□□□□□ -1.6
GTF3C3-209ENST00000466862 PPP2R2AP63151 447 aa5.03□□□□□ -1.6
GTF3C3-209ENST00000466862 MAP4K2Q12851 820 aa5.03□□□□□ -1.6
GTF3C3-209ENST00000466862 UBXN11Q5T124 520 aa5.03□□□□□ -1.6
GTF3C3-209ENST00000466862 DBX2Q6ZNG2 339 aa5.03□□□□□ -1.6
GTF3C3-209ENST00000466862 CEP68Q76N32 757 aa5.03□□□□□ -1.6
GTF3C3-209ENST00000466862 MILR1Q7Z6M3 343 aa5.03□□□□□ -1.6
GTF3C3-209ENST00000466862 HNRNPLLQ8WVV9 542 aaKnown RBP5.03□□□□□ -1.6
GTF3C3-209ENST00000466862 TMEM169Q96HH4 297 aa5.03□□□□□ -1.6
GTF3C3-209ENST00000466862 DTLQ9NZJ0 730 aa5.03□□□□□ -1.6
GTF3C3-209ENST00000466862 WASF3Q9UPY6 502 aa5.03□□□□□ -1.6
GTF3C3-209ENST00000466862 A0A1W2PQU0 124 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms