RNA–Protein interactions for RNA: ENST00000466829.5

COL16A1-207, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 254 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-207ENST00000466829 BLOC1S2Q6QNY1 142 aa18.46■□□□□ 0.55
COL16A1-207ENST00000466829 RAB11FIP4Q86YS3 637 aa18.46■□□□□ 0.55
COL16A1-207ENST00000466829 FAM126BQ8IXS8 530 aa18.46■□□□□ 0.55
COL16A1-207ENST00000466829 NEK1Q96PY6 1258 aa18.46■□□□□ 0.55
COL16A1-207ENST00000466829 MAP3K14Q99558 947 aa18.46■□□□□ 0.55
COL16A1-207ENST00000466829 MTG1Q9BT17 334 aaPredicted RBP18.46■□□□□ 0.55
COL16A1-207ENST00000466829 SEZ6LQ9BYH1 1024 aa18.46■□□□□ 0.55
COL16A1-207ENST00000466829 UPF3BQ9BZI7 483 aaKnown RBP18.46■□□□□ 0.55
COL16A1-207ENST00000466829 KPNA6O60684 536 aa18.45■□□□□ 0.54
COL16A1-207ENST00000466829 FAM47CQ5HY64 1035 aa18.45■□□□□ 0.54
COL16A1-207ENST00000466829 TMEM199Q8N511 208 aa18.45■□□□□ 0.54
COL16A1-207ENST00000466829 DEFB123Q8N688 67 aa18.45■□□□□ 0.54
COL16A1-207ENST00000466829 SAMD3Q8N6K7 520 aa18.45■□□□□ 0.54
COL16A1-207ENST00000466829 RNPC3Q96LT9 517 aaKnown RBP18.45■□□□□ 0.54
COL16A1-207ENST00000466829 PDRG1Q9NUG6 133 aa18.45■□□□□ 0.54
COL16A1-207ENST00000466829 TBX21Q9UL17 535 aa18.45■□□□□ 0.54
COL16A1-207ENST00000466829 MRVI1Q9Y6F6 885 aa18.45■□□□□ 0.54
COL16A1-207ENST00000466829 OPLAHO14841 1288 aa18.44■□□□□ 0.54
COL16A1-207ENST00000466829 ARIH2O95376 493 aa18.44■□□□□ 0.54
COL16A1-207ENST00000466829 GH1P01241 217 aa18.44■□□□□ 0.54
COL16A1-207ENST00000466829 LIFRP42702 1097 aa18.44■□□□□ 0.54
COL16A1-207ENST00000466829 FGD1P98174 961 aa18.44■□□□□ 0.54
COL16A1-207ENST00000466829 PURAQ00577 322 aaKnown RBP18.44■□□□□ 0.54
COL16A1-207ENST00000466829 ANKRD1Q15327 319 aa18.44■□□□□ 0.54
COL16A1-207ENST00000466829 MFSD5Q6N075 450 aa18.44■□□□□ 0.54
COL16A1-207ENST00000466829 CCDC82Q8N4S0 544 aa18.44■□□□□ 0.54
COL16A1-207ENST00000466829 SLC43A3Q8NBI5 491 aa18.44■□□□□ 0.54
COL16A1-207ENST00000466829 CUL5Q93034 780 aa18.44■□□□□ 0.54
COL16A1-207ENST00000466829 SPZ1Q9BXG8 430 aa18.44■□□□□ 0.54
COL16A1-207ENST00000466829 TRPV6Q9H1D0 765 aa18.44■□□□□ 0.54
COL16A1-207ENST00000466829 PLEKHA8P1O95397 391 aa18.43■□□□□ 0.54
COL16A1-207ENST00000466829 RPS6KB1P23443 525 aa18.43■□□□□ 0.54
COL16A1-207ENST00000466829 PPIGQ13427 754 aaKnown RBP eCLIP18.43■□□□□ 0.542e-9■■■■■ 39.8
COL16A1-207ENST00000466829 GPR153Q6NV75 609 aa18.43■□□□□ 0.54
COL16A1-207ENST00000466829 Q7L0L9 218 aa18.43■□□□□ 0.54
COL16A1-207ENST00000466829 MICU3Q86XE3 530 aa18.43■□□□□ 0.54
COL16A1-207ENST00000466829 CMTR1Q8N1G2 835 aaKnown RBP18.43■□□□□ 0.54
COL16A1-207ENST00000466829 AFG1LQ8WV93 481 aa18.43■□□□□ 0.54
COL16A1-207ENST00000466829 PDCD2LQ9BRP1 358 aa18.43■□□□□ 0.54
COL16A1-207ENST00000466829 HIPK3Q9H422 1215 aa18.43■□□□□ 0.54
COL16A1-207ENST00000466829 NAP1L2Q9ULW6 460 aaPredicted RBP18.43■□□□□ 0.54
COL16A1-207ENST00000466829 GRIN2DO15399 1336 aa18.43■□□□□ 0.54
COL16A1-207ENST00000466829 LCTP09848 1927 aa18.43■□□□□ 0.54
COL16A1-207ENST00000466829 A6NJR5 290 aa18.42■□□□□ 0.54
COL16A1-207ENST00000466829 B4GALT4O60513 344 aa18.42■□□□□ 0.54
COL16A1-207ENST00000466829 CD4P01730 458 aa18.42■□□□□ 0.54
COL16A1-207ENST00000466829 SUPT20HL2P0C7V6 817 aa18.42■□□□□ 0.54
COL16A1-207ENST00000466829 CCND2P30279 289 aa18.42■□□□□ 0.54
COL16A1-207ENST00000466829 CYP2C18P33260 490 aa18.42■□□□□ 0.54
COL16A1-207ENST00000466829 EPHB4P54760 987 aa18.42■□□□□ 0.54
COL16A1-207ENST00000466829 COL9A3Q14050 684 aaPredicted RBP18.42■□□□□ 0.54
COL16A1-207ENST00000466829 CCDC62Q6P9F0 684 aa18.42■□□□□ 0.54
COL16A1-207ENST00000466829 SRBD1Q8N5C6 995 aaKnown RBP18.42■□□□□ 0.54
COL16A1-207ENST00000466829 SMARCC2Q8TAQ2 1214 aa18.42■□□□□ 0.54
COL16A1-207ENST00000466829 ZSCAN31Q96LW9 406 aaPredicted RBP18.42■□□□□ 0.54
COL16A1-207ENST00000466829 TCEANC2Q96MN5 208 aa18.42■□□□□ 0.54
COL16A1-207ENST00000466829 LIMCH1Q9UPQ0 1083 aa18.42■□□□□ 0.54
COL16A1-207ENST00000466829 LRRC37A2A6NM11 1700 aa18.42■□□□□ 0.54
COL16A1-207ENST00000466829 LAMA3Q16787 3333 aa18.41■□□□□ 0.54
COL16A1-207ENST00000466829 HSP90AA1P07900 732 aaKnown RBP18.41■□□□□ 0.54
COL16A1-207ENST00000466829 CSF2RAP15509 400 aa18.41■□□□□ 0.54
COL16A1-207ENST00000466829 SMARCA1P28370 1054 aa18.41■□□□□ 0.54
COL16A1-207ENST00000466829 GHRHRQ02643 423 aa18.41■□□□□ 0.54
COL16A1-207ENST00000466829 PGM5Q15124 567 aa18.41■□□□□ 0.54
COL16A1-207ENST00000466829 NBPF20Q3BBV1 942 aa18.41■□□□□ 0.54
COL16A1-207ENST00000466829 DHX32Q7L7V1 743 aaKnown RBP18.41■□□□□ 0.54
COL16A1-207ENST00000466829 DHX37Q8IY37 1157 aaKnown RBP18.41■□□□□ 0.54
COL16A1-207ENST00000466829 FANCBQ8NB91 859 aa18.41■□□□□ 0.54
COL16A1-207ENST00000466829 TMX3Q96JJ7 454 aa18.41■□□□□ 0.54
COL16A1-207ENST00000466829 ZFP91Q96JP5 570 aaPredicted RBP18.41■□□□□ 0.54
COL16A1-207ENST00000466829 TRMT13Q9NUP7 481 aaKnown RBP18.41■□□□□ 0.54
COL16A1-207ENST00000466829 NOD1Q9Y239 953 aa18.41■□□□□ 0.54
COL16A1-207ENST00000466829 hCG_1642624A0A1W2PR95 340 aa18.4■□□□□ 0.54
COL16A1-207ENST00000466829 SORBS3O60504 671 aa18.4■□□□□ 0.54
COL16A1-207ENST00000466829 AK2P54819 239 aa18.4■□□□□ 0.54
COL16A1-207ENST00000466829 CCL23P55773 120 aa18.4■□□□□ 0.54
COL16A1-207ENST00000466829 CUL4AQ13619 759 aa18.4■□□□□ 0.54
COL16A1-207ENST00000466829 LAMC2Q13753 1193 aa18.4■□□□□ 0.54
COL16A1-207ENST00000466829 DGKDQ16760 1214 aa18.4■□□□□ 0.54
COL16A1-207ENST00000466829 KCNV1Q6PIU1 500 aa18.4■□□□□ 0.54
COL16A1-207ENST00000466829 VSIG10LQ86VR7 867 aa18.4■□□□□ 0.54
COL16A1-207ENST00000466829 PPP1R13LQ8WUF5 828 aa18.4■□□□□ 0.54
COL16A1-207ENST00000466829 DDX41Q9UJV9 622 aaKnown RBP18.4■□□□□ 0.54
COL16A1-207ENST00000466829 MMP3P08254 477 aa18.39■□□□□ 0.53
COL16A1-207ENST00000466829 ACRP10323 421 aa18.39■□□□□ 0.53
COL16A1-207ENST00000466829 EXOSC10Q01780 885 aaKnown RBP18.39■□□□□ 0.53
COL16A1-207ENST00000466829 ARHGAP1Q07960 439 aa18.39■□□□□ 0.53
COL16A1-207ENST00000466829 SGMS1Q86VZ5 419 aa18.39■□□□□ 0.53
COL16A1-207ENST00000466829 FBXL16Q8N461 479 aa18.39■□□□□ 0.53
COL16A1-207ENST00000466829 IL31RAQ8NI17 732 aa18.39■□□□□ 0.53
COL16A1-207ENST00000466829 INTS4Q96HW7 963 aaKnown RBP18.39■□□□□ 0.53
COL16A1-207ENST00000466829 FAM161BQ96MY7 647 aa18.39■□□□□ 0.53
COL16A1-207ENST00000466829 SH2B1Q9NRF2 756 aaPredicted RBP18.39■□□□□ 0.53
COL16A1-207ENST00000466829 CIZ1Q9ULV3 898 aaPredicted RBP18.39■□□□□ 0.53
COL16A1-207ENST00000466829 SZT2Q5T011 3432 aa18.39■□□□□ 0.53
COL16A1-207ENST00000466829 LTBP2Q14767 1821 aa18.38■□□□□ 0.53
COL16A1-207ENST00000466829 ZBTB43O43298 467 aa18.38■□□□□ 0.53
COL16A1-207ENST00000466829 CYP2C9P11712 490 aa18.38■□□□□ 0.53
COL16A1-207ENST00000466829 GNPTABQ3T906 1256 aa18.38■□□□□ 0.53
COL16A1-207ENST00000466829 ZNF697Q5TEC3 545 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms