RNA–Protein interactions for RNA: ENST00000466613.2

SDHB-203, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-203ENST00000466613 CSF2RAP15509 400 aa19.24■□□□□ 0.67
SDHB-203ENST00000466613 CYP2C18P33260 490 aa19.24■□□□□ 0.67
SDHB-203ENST00000466613 TSGA10IPQ3SY00 556 aa19.24■□□□□ 0.67
SDHB-203ENST00000466613 FAM109BQ6ICB4 259 aaPredicted RBP19.24■□□□□ 0.67
SDHB-203ENST00000466613 VSIG10LQ86VR7 867 aa19.24■□□□□ 0.67
SDHB-203ENST00000466613 FCHSD1Q86WN1 690 aa19.24■□□□□ 0.67
SDHB-203ENST00000466613 SRBD1Q8N5C6 995 aaKnown RBP19.24■□□□□ 0.67
SDHB-203ENST00000466613 AFG1LQ8WV93 481 aa19.24■□□□□ 0.67
SDHB-203ENST00000466613 EMID1Q96A84 441 aaPredicted RBP19.24■□□□□ 0.67
SDHB-203ENST00000466613 COL6A3P12111 3177 aa19.23■□□□□ 0.67
SDHB-203ENST00000466613 RGS20O76081 388 aa19.23■□□□□ 0.67
SDHB-203ENST00000466613 SMAD3P84022 425 aaKnown RBP19.23■□□□□ 0.67
SDHB-203ENST00000466613 NBPF20Q3BBV1 942 aa19.23■□□□□ 0.67
SDHB-203ENST00000466613 NFRKBQ6P4R8 1299 aa19.23■□□□□ 0.67
SDHB-203ENST00000466613 RAB11FIP4Q86YS3 637 aa19.23■□□□□ 0.67
SDHB-203ENST00000466613 RASEFQ8IZ41 740 aa19.23■□□□□ 0.67
SDHB-203ENST00000466613 CMTR1Q8N1G2 835 aaKnown RBP19.23■□□□□ 0.67
SDHB-203ENST00000466613 IL31RAQ8NI17 732 aa19.23■□□□□ 0.67
SDHB-203ENST00000466613 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.23■□□□□ 0.677e-7■□□□□ 8.1
SDHB-203ENST00000466613 NOC4LQ9BVI4 516 aaKnown RBP19.23■□□□□ 0.67
SDHB-203ENST00000466613 TRMT13Q9NUP7 481 aaKnown RBP19.23■□□□□ 0.67
SDHB-203ENST00000466613 FRMPD4Q14CM0 1322 aa19.23■□□□□ 0.67
SDHB-203ENST00000466613 UMODL1Q5DID0 1318 aa19.23■□□□□ 0.67
SDHB-203ENST00000466613 SUPT20HL2P0C7V6 817 aa19.22■□□□□ 0.67
SDHB-203ENST00000466613 CCND2P30279 289 aa19.22■□□□□ 0.67
SDHB-203ENST00000466613 EXOSC10Q01780 885 aaKnown RBP19.22■□□□□ 0.67
SDHB-203ENST00000466613 PTPN11Q06124 597 aaPredicted RBP19.22■□□□□ 0.67
SDHB-203ENST00000466613 KRT32Q14532 448 aa19.22■□□□□ 0.67
SDHB-203ENST00000466613 ADCK5Q3MIX3 580 aa19.22■□□□□ 0.67
SDHB-203ENST00000466613 FAM47CQ5HY64 1035 aa19.22■□□□□ 0.67
SDHB-203ENST00000466613 PSRC1Q6PGN9 363 aaPredicted RBP19.22■□□□□ 0.67
SDHB-203ENST00000466613 KCNV1Q6PIU1 500 aa19.22■□□□□ 0.67
SDHB-203ENST00000466613 C16orf59Q7L2K0 433 aa19.22■□□□□ 0.67
SDHB-203ENST00000466613 DHX32Q7L7V1 743 aaKnown RBP19.22■□□□□ 0.67
SDHB-203ENST00000466613 MICU3Q86XE3 530 aa19.22■□□□□ 0.67
SDHB-203ENST00000466613 FANCBQ8NB91 859 aa19.22■□□□□ 0.67
SDHB-203ENST00000466613 MTMR10Q9NXD2 777 aa19.22■□□□□ 0.67
SDHB-203ENST00000466613 TANC1Q9C0D5 1861 aa19.22■□□□□ 0.67
SDHB-203ENST00000466613 NEFLP07196 543 aa19.21■□□□□ 0.67
SDHB-203ENST00000466613 LAMC2Q13753 1193 aa19.21■□□□□ 0.67
SDHB-203ENST00000466613 TMEM240Q5SV17 173 aa19.21■□□□□ 0.67
SDHB-203ENST00000466613 ZNF697Q5TEC3 545 aa19.21■□□□□ 0.67
SDHB-203ENST00000466613 SYNE3Q6ZMZ3 975 aa19.21■□□□□ 0.67
SDHB-203ENST00000466613 TMTC3Q6ZXV5 915 aa19.21■□□□□ 0.67
SDHB-203ENST00000466613 IL23AQ9NPF7 189 aa19.21■□□□□ 0.67
SDHB-203ENST00000466613 DOCK5Q9H7D0 1870 aa19.2■□□□□ 0.66
SDHB-203ENST00000466613 PIK3CDO00329 1044 aa19.2■□□□□ 0.66
SDHB-203ENST00000466613 ACRP10323 421 aa19.2■□□□□ 0.66
SDHB-203ENST00000466613 CASTP20810 708 aaKnown RBP19.2■□□□□ 0.66
SDHB-203ENST00000466613 DGKDQ16760 1214 aa19.2■□□□□ 0.66
SDHB-203ENST00000466613 APOA5Q6Q788 366 aa19.2■□□□□ 0.66
SDHB-203ENST00000466613 DHX37Q8IY37 1157 aaKnown RBP19.2■□□□□ 0.66
SDHB-203ENST00000466613 PPTC7Q8NI37 304 aa19.2■□□□□ 0.66
SDHB-203ENST00000466613 SMARCC2Q8TAQ2 1214 aa19.2■□□□□ 0.66
SDHB-203ENST00000466613 CUL5Q93034 780 aa19.2■□□□□ 0.66
SDHB-203ENST00000466613 TCEANC2Q96MN5 208 aa19.2■□□□□ 0.66
SDHB-203ENST00000466613 WNT8AQ9H1J5 351 aa19.2■□□□□ 0.66
SDHB-203ENST00000466613 SCN5AQ14524 2016 aa19.2■□□□□ 0.66
SDHB-203ENST00000466613 MEIS2O14770 477 aa19.19■□□□□ 0.66
SDHB-203ENST00000466613 STAM2O75886 525 aa19.19■□□□□ 0.66
SDHB-203ENST00000466613 HMGB1P09429 215 aaKnown RBP19.19■□□□□ 0.66
SDHB-203ENST00000466613 TGFB3P10600 412 aa19.19■□□□□ 0.66
SDHB-203ENST00000466613 CYP2C9P11712 490 aa19.19■□□□□ 0.66
SDHB-203ENST00000466613 CCL23P55773 120 aa19.19■□□□□ 0.66
SDHB-203ENST00000466613 MYSM1Q5VVJ2 828 aa19.19■□□□□ 0.66
SDHB-203ENST00000466613 USP17L6PQ6QN14 398 aa19.19■□□□□ 0.66
SDHB-203ENST00000466613 ZNF365Q70YC5 407 aa19.19■□□□□ 0.66
SDHB-203ENST00000466613 PPP1R13LQ8WUF5 828 aa19.19■□□□□ 0.66
SDHB-203ENST00000466613 KAT2BQ92831 832 aa19.19■□□□□ 0.66
SDHB-203ENST00000466613 ZFP91Q96JP5 570 aaPredicted RBP19.19■□□□□ 0.66
SDHB-203ENST00000466613 RBM28Q9NW13 759 aaKnown RBP19.19■□□□□ 0.66
SDHB-203ENST00000466613 CDH23Q9H251 3354 aa19.18■□□□□ 0.66
SDHB-203ENST00000466613 GGPS1O95749 300 aa19.18■□□□□ 0.66
SDHB-203ENST00000466613 UBA1P22314 1058 aaKnown RBP19.18■□□□□ 0.66
SDHB-203ENST00000466613 MRPS9P82933 396 aaKnown RBP19.18■□□□□ 0.66
SDHB-203ENST00000466613 GNPTABQ3T906 1256 aa19.18■□□□□ 0.66
SDHB-203ENST00000466613 CELF3Q5SZQ8 465 aaKnown RBP19.18■□□□□ 0.66
SDHB-203ENST00000466613 RASIP1Q5U651 963 aa19.18■□□□□ 0.66
SDHB-203ENST00000466613 SESTD1Q86VW0 696 aa19.18■□□□□ 0.66
SDHB-203ENST00000466613 CCDC82Q8N4S0 544 aa19.18■□□□□ 0.66
SDHB-203ENST00000466613 KCNB2Q92953 911 aa19.18■□□□□ 0.66
SDHB-203ENST00000466613 STXBP5LQ9Y2K9 1186 aa19.18■□□□□ 0.66
SDHB-203ENST00000466613 TRIP12Q14669 1992 aaPredicted RBP19.18■□□□□ 0.66
SDHB-203ENST00000466613 CNTNAP5Q8WYK1 1306 aa19.18■□□□□ 0.66
SDHB-203ENST00000466613 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.17■□□□□ 0.66
SDHB-203ENST00000466613 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.17■□□□□ 0.66
SDHB-203ENST00000466613 hCG_1642624A0A1W2PR95 340 aa19.17■□□□□ 0.66
SDHB-203ENST00000466613 ZBTB43O43298 467 aa19.17■□□□□ 0.66
SDHB-203ENST00000466613 HOXD8P13378 290 aaPredicted RBP19.17■□□□□ 0.66
SDHB-203ENST00000466613 HSPA4P34932 840 aa19.17■□□□□ 0.66
SDHB-203ENST00000466613 CHMP4BP1P59074 171 aa19.17■□□□□ 0.66
SDHB-203ENST00000466613 SP2Q02086 613 aa19.17■□□□□ 0.66
SDHB-203ENST00000466613 GPKOWQ92917 476 aaPredicted RBP eCLIP19.17■□□□□ 0.66
SDHB-203ENST00000466613 FAM161BQ96MY7 647 aa19.17■□□□□ 0.66
SDHB-203ENST00000466613 GUCD1Q96NT3 240 aa19.17■□□□□ 0.66
SDHB-203ENST00000466613 INPP4AQ96PE3 977 aaPredicted RBP19.17■□□□□ 0.66
SDHB-203ENST00000466613 KATNAL1Q9BW62 490 aa19.17■□□□□ 0.66
SDHB-203ENST00000466613 BRPF3Q9ULD4 1205 aa19.17■□□□□ 0.66
SDHB-203ENST00000466613 GBF1Q92538 1859 aa19.17■□□□□ 0.66
SDHB-203ENST00000466613 F2P00734 622 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms