RNA–Protein interactions for RNA: ENST00000466392.1

EDEM3-204, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 5

Gene EDEM3, Length 491 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-204ENST00000466392 TM6SF1Q9BZW5 370 aa13.6□□□□□ -0.23
EDEM3-204ENST00000466392 MAF1Q9H063 256 aa13.6□□□□□ -0.23
EDEM3-204ENST00000466392 PDRG1Q9NUG6 133 aa13.6□□□□□ -0.23
EDEM3-204ENST00000466392 MAP3K20Q9NYL2 800 aaKnown RBP13.6□□□□□ -0.23
EDEM3-204ENST00000466392 RBM27Q9P2N5 1060 aaKnown RBP13.6□□□□□ -0.23
EDEM3-204ENST00000466392 STXBP3O00186 592 aa13.59□□□□□ -0.23
EDEM3-204ENST00000466392 EIF3JO75822 258 aaKnown RBP13.59□□□□□ -0.23
EDEM3-204ENST00000466392 MYL3P08590 195 aa13.59□□□□□ -0.23
EDEM3-204ENST00000466392 NAPAP54920 295 aa13.59□□□□□ -0.23
EDEM3-204ENST00000466392 MRPS9P82933 396 aaKnown RBP13.59□□□□□ -0.23
EDEM3-204ENST00000466392 TTLL4Q14679 1199 aa13.59□□□□□ -0.23
EDEM3-204ENST00000466392 VSIG10LQ86VR7 867 aa13.59□□□□□ -0.23
EDEM3-204ENST00000466392 CUL5Q93034 780 aa13.59□□□□□ -0.23
EDEM3-204ENST00000466392 BCAS3Q9H6U6 928 aa13.59□□□□□ -0.23
EDEM3-204ENST00000466392 PSTPIP2Q9H939 334 aa13.59□□□□□ -0.23
EDEM3-204ENST00000466392 PDLIM7Q9NR12 457 aa13.59□□□□□ -0.23
EDEM3-204ENST00000466392 RTEL1Q9NZ71 1219 aa13.59□□□□□ -0.23
EDEM3-204ENST00000466392 Q9Y3F1 56 aa13.59□□□□□ -0.23
EDEM3-204ENST00000466392 MRVI1Q9Y6F6 885 aa13.59□□□□□ -0.23
EDEM3-204ENST00000466392 FRMPD4Q14CM0 1322 aa13.59□□□□□ -0.23
EDEM3-204ENST00000466392 TRIM43BA6NCK2 446 aa13.58□□□□□ -0.24
EDEM3-204ENST00000466392 CCND2P30279 289 aa13.58□□□□□ -0.24
EDEM3-204ENST00000466392 MAGEA10P43363 369 aaPredicted RBP13.58□□□□□ -0.24
EDEM3-204ENST00000466392 RCAN1P53805 252 aa13.58□□□□□ -0.24
EDEM3-204ENST00000466392 ARHGAP1Q07960 439 aa13.58□□□□□ -0.24
EDEM3-204ENST00000466392 NTRK3Q16288 839 aa13.58□□□□□ -0.24
EDEM3-204ENST00000466392 SAMD3Q8N6K7 520 aa13.58□□□□□ -0.24
EDEM3-204ENST00000466392 TRIM43Q96BQ3 446 aaPredicted RBP13.58□□□□□ -0.24
EDEM3-204ENST00000466392 TMEM260Q9NX78 707 aa13.58□□□□□ -0.24
EDEM3-204ENST00000466392 DDX41Q9UJV9 622 aaKnown RBP13.58□□□□□ -0.24
EDEM3-204ENST00000466392 GRIN2DO15399 1336 aa13.58□□□□□ -0.24
EDEM3-204ENST00000466392 A0A0U1RQG5 324 aaPredicted RBP13.57□□□□□ -0.24
EDEM3-204ENST00000466392 PIK3CDO00329 1044 aa13.57□□□□□ -0.24
EDEM3-204ENST00000466392 ITGB8P26012 769 aa13.57□□□□□ -0.24
EDEM3-204ENST00000466392 EVCP57679 992 aa13.57□□□□□ -0.24
EDEM3-204ENST00000466392 CHMP4BP1P59074 171 aa13.57□□□□□ -0.24
EDEM3-204ENST00000466392 PURAQ00577 322 aaKnown RBP13.57□□□□□ -0.24
EDEM3-204ENST00000466392 SP2Q02086 613 aa13.57□□□□□ -0.24
EDEM3-204ENST00000466392 PKN1Q16512 942 aa13.57□□□□□ -0.24
EDEM3-204ENST00000466392 PFKFB3Q16875 520 aaPredicted RBP13.57□□□□□ -0.24
EDEM3-204ENST00000466392 C1orf53Q5VUE5 145 aa13.57□□□□□ -0.24
EDEM3-204ENST00000466392 AFG1LQ8WV93 481 aa13.57□□□□□ -0.24
EDEM3-204ENST00000466392 GDF15Q99988 308 aa13.57□□□□□ -0.24
EDEM3-204ENST00000466392 SLC26A6Q9BXS9 759 aa13.57□□□□□ -0.24
EDEM3-204ENST00000466392 PRO3102Q9H379 93 aa13.57□□□□□ -0.24
EDEM3-204ENST00000466392 BARHL2Q9NY43 387 aa13.57□□□□□ -0.24
EDEM3-204ENST00000466392 SCN10AQ9Y5Y9 1956 aa13.57□□□□□ -0.24
EDEM3-204ENST00000466392 ELP1O95163 1332 aa13.57□□□□□ -0.24
EDEM3-204ENST00000466392 CCDC196A0A1B0GTZ2 297 aa13.56□□□□□ -0.24
EDEM3-204ENST00000466392 SMCO2A6NFE2 343 aa13.56□□□□□ -0.24
EDEM3-204ENST00000466392 A6NJR5 290 aa13.56□□□□□ -0.24
EDEM3-204ENST00000466392 RBAK-RBAKDNI3L0D1 243 aa13.56□□□□□ -0.24
EDEM3-204ENST00000466392 ARVCFO00192 962 aa13.56□□□□□ -0.24
EDEM3-204ENST00000466392 NKRFO15226 690 aaKnown RBP eCLIP13.56□□□□□ -0.24
EDEM3-204ENST00000466392 GH1P01241 217 aa13.56□□□□□ -0.24
EDEM3-204ENST00000466392 CLTBP09497 229 aa13.56□□□□□ -0.24
EDEM3-204ENST00000466392 SCG2P13521 617 aa13.56□□□□□ -0.24
EDEM3-204ENST00000466392 UBA1P22314 1058 aaKnown RBP13.56□□□□□ -0.24
EDEM3-204ENST00000466392 CPT1AP50416 773 aa13.56□□□□□ -0.24
EDEM3-204ENST00000466392 CDK7P50613 346 aa13.56□□□□□ -0.24
EDEM3-204ENST00000466392 ADCY7P51828 1080 aa13.56□□□□□ -0.24
EDEM3-204ENST00000466392 AK2P54819 239 aa13.56□□□□□ -0.24
EDEM3-204ENST00000466392 FAAP100Q0VG06 881 aa13.56□□□□□ -0.24
EDEM3-204ENST00000466392 SEMA3FQ13275 785 aa13.56□□□□□ -0.24
EDEM3-204ENST00000466392 ITGA7Q13683 1181 aa13.56□□□□□ -0.24
EDEM3-204ENST00000466392 HABP4Q5JVS0 413 aaKnown RBP13.56□□□□□ -0.24
EDEM3-204ENST00000466392 RIC8AQ9NPQ8 531 aa13.56□□□□□ -0.24
EDEM3-204ENST00000466392 TPCN1Q9ULQ1 816 aa13.56□□□□□ -0.24
EDEM3-204ENST00000466392 PCDHA6Q9UN73 950 aa13.56□□□□□ -0.24
EDEM3-204ENST00000466392 TELO2Q9Y4R8 837 aa13.56□□□□□ -0.24
EDEM3-204ENST00000466392 PCDHA8Q9Y5H6 950 aa13.56□□□□□ -0.24
EDEM3-204ENST00000466392 SPDYE3A6NKU9 549 aa13.55□□□□□ -0.24
EDEM3-204ENST00000466392 PRPF3O43395 683 aaKnown RBP13.55□□□□□ -0.24
EDEM3-204ENST00000466392 ZEB2O60315 1214 aa13.55□□□□□ -0.24
EDEM3-204ENST00000466392 LARGE1O95461 756 aa13.55□□□□□ -0.24
EDEM3-204ENST00000466392 GGPS1O95749 300 aa13.55□□□□□ -0.24
EDEM3-204ENST00000466392 MMP3P08254 477 aa13.55□□□□□ -0.24
EDEM3-204ENST00000466392 ANAPC15P60006 121 aa13.55□□□□□ -0.24
EDEM3-204ENST00000466392 PCNX4Q63HM2 1172 aa13.55□□□□□ -0.24
EDEM3-204ENST00000466392 PPP1R18Q6NYC8 613 aa13.55□□□□□ -0.24
EDEM3-204ENST00000466392 ANKRD33Q7Z3H0 272 aa13.55□□□□□ -0.24
EDEM3-204ENST00000466392 FAM126BQ8IXS8 530 aa13.55□□□□□ -0.24
EDEM3-204ENST00000466392 DHX37Q8IY37 1157 aaKnown RBP13.55□□□□□ -0.24
EDEM3-204ENST00000466392 BADQ92934 168 aa13.55□□□□□ -0.24
EDEM3-204ENST00000466392 POLR3EQ9NVU0 708 aa13.55□□□□□ -0.24
EDEM3-204ENST00000466392 PKD2L1Q9P0L9 805 aa13.55□□□□□ -0.24
EDEM3-204ENST00000466392 VPS54Q9P1Q0 977 aa13.55□□□□□ -0.24
EDEM3-204ENST00000466392 PRKAG2Q9UGJ0 569 aa13.55□□□□□ -0.24
EDEM3-204ENST00000466392 TRIOBPQ9H2D6 2365 aa13.55□□□□□ -0.24
EDEM3-204ENST00000466392 B4GALT4O60513 344 aa13.54□□□□□ -0.24
EDEM3-204ENST00000466392 ZNF286BP0CG31 522 aa13.54□□□□□ -0.24
EDEM3-204ENST00000466392 IFNAR1P17181 557 aa13.54□□□□□ -0.24
EDEM3-204ENST00000466392 SCRN1Q12765 414 aa13.54□□□□□ -0.24
EDEM3-204ENST00000466392 HSDL1Q3SXM5 330 aa13.54□□□□□ -0.24
EDEM3-204ENST00000466392 MYSM1Q5VVJ2 828 aa13.54□□□□□ -0.24
EDEM3-204ENST00000466392 JAKMIP3Q5VZ66 844 aa13.54□□□□□ -0.24
EDEM3-204ENST00000466392 SLC43A3Q8NBI5 491 aa13.54□□□□□ -0.24
EDEM3-204ENST00000466392 RASGRP4Q8TDF6 673 aa13.54□□□□□ -0.24
EDEM3-204ENST00000466392 ZNF274Q96GC6 653 aaPredicted RBP13.54□□□□□ -0.24
EDEM3-204ENST00000466392 AIFM3Q96NN9 605 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms