RNA–Protein interactions for RNA: ENST00000466243.1

SLC6A8-207, Transcript of solute carrier family 6 member 8, humanhuman

TSL 2

Gene SLC6A8, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-207ENST00000466243 SMCHD1A6NHR9 2005 aa15.76■□□□□ 0.11
SLC6A8-207ENST00000466243 GRIN2DO15399 1336 aa15.75■□□□□ 0.11
SLC6A8-207ENST00000466243 A6NJR5 290 aa15.75■□□□□ 0.11
SLC6A8-207ENST00000466243 GOLGA8AA7E2F4 631 aa15.75■□□□□ 0.11
SLC6A8-207ENST00000466243 GOLGA8BA8MQT2 603 aa15.75■□□□□ 0.11
SLC6A8-207ENST00000466243 KPNA6O60684 536 aa15.75■□□□□ 0.11
SLC6A8-207ENST00000466243 PSMA5P28066 241 aa15.75■□□□□ 0.11
SLC6A8-207ENST00000466243 LRIT3Q3SXY7 679 aa15.75■□□□□ 0.11
SLC6A8-207ENST00000466243 HEATR3Q7Z4Q2 680 aa15.75■□□□□ 0.11
SLC6A8-207ENST00000466243 VSIG10LQ86VR7 867 aa15.75■□□□□ 0.11
SLC6A8-207ENST00000466243 IL31RAQ8NI17 732 aa15.75■□□□□ 0.11
SLC6A8-207ENST00000466243 AFG1LQ8WV93 481 aa15.75■□□□□ 0.11
SLC6A8-207ENST00000466243 LRCH3Q96II8 777 aa15.75■□□□□ 0.11
SLC6A8-207ENST00000466243 DDX41Q9UJV9 622 aaKnown RBP15.75■□□□□ 0.11
SLC6A8-207ENST00000466243 TIMP1P01033 207 aa15.74■□□□□ 0.11
SLC6A8-207ENST00000466243 ARHGAP1Q07960 439 aa15.74■□□□□ 0.11
SLC6A8-207ENST00000466243 USP17L6PQ6QN14 398 aa15.74■□□□□ 0.11
SLC6A8-207ENST00000466243 Q6ZUG5 572 aa15.74■□□□□ 0.11
SLC6A8-207ENST00000466243 ZFP91Q96JP5 570 aaPredicted RBP15.74■□□□□ 0.11
SLC6A8-207ENST00000466243 PSTPIP2Q9H939 334 aa15.74■□□□□ 0.11
SLC6A8-207ENST00000466243 CNTNAP5Q8WYK1 1306 aa15.73■□□□□ 0.11
SLC6A8-207ENST00000466243 PIK3CDO00329 1044 aa15.73■□□□□ 0.11
SLC6A8-207ENST00000466243 EPB41L2O43491 1005 aaKnown RBP15.73■□□□□ 0.11
SLC6A8-207ENST00000466243 B4GALT4O60513 344 aa15.73■□□□□ 0.11
SLC6A8-207ENST00000466243 CD4P01730 458 aa15.73■□□□□ 0.11
SLC6A8-207ENST00000466243 MMP3P08254 477 aa15.73■□□□□ 0.11
SLC6A8-207ENST00000466243 CHMP4BP1P59074 171 aa15.73■□□□□ 0.11
SLC6A8-207ENST00000466243 FPGSQ05932 587 aa15.73■□□□□ 0.11
SLC6A8-207ENST00000466243 APOBRQ0VD83 1088 aa15.73■□□□□ 0.11
SLC6A8-207ENST00000466243 SHHQ15465 462 aa15.73■□□□□ 0.11
SLC6A8-207ENST00000466243 FAM47CQ5HY64 1035 aa15.73■□□□□ 0.11
SLC6A8-207ENST00000466243 KCNV1Q6PIU1 500 aa15.73■□□□□ 0.11
SLC6A8-207ENST00000466243 GPKOWQ92917 476 aaPredicted RBP eCLIP15.73■□□□□ 0.11
SLC6A8-207ENST00000466243 BRF1Q92994 677 aa15.73■□□□□ 0.11
SLC6A8-207ENST00000466243 PPP1R12CQ9BZL4 782 aa15.73■□□□□ 0.11
SLC6A8-207ENST00000466243 TRPV6Q9H1D0 765 aa15.73■□□□□ 0.11
SLC6A8-207ENST00000466243 ALDH8A1Q9H2A2 487 aaPredicted RBP15.73■□□□□ 0.11
SLC6A8-207ENST00000466243 LRRC37A2A6NM11 1700 aa15.73■□□□□ 0.11
SLC6A8-207ENST00000466243 MEIS2O14770 477 aa15.72■□□□□ 0.11
SLC6A8-207ENST00000466243 RGS20O76081 388 aa15.72■□□□□ 0.11
SLC6A8-207ENST00000466243 CASTP20810 708 aaKnown RBP15.72■□□□□ 0.11
SLC6A8-207ENST00000466243 RPS6KB1P23443 525 aa15.72■□□□□ 0.11
SLC6A8-207ENST00000466243 METAP2P50579 478 aaKnown RBP eCLIP15.72■□□□□ 0.115e-26■□□□□ 8.4
SLC6A8-207ENST00000466243 RCAN1P53805 252 aa15.72■□□□□ 0.11
SLC6A8-207ENST00000466243 LAMC2Q13753 1193 aa15.72■□□□□ 0.11
SLC6A8-207ENST00000466243 NBPF20Q3BBV1 942 aa15.72■□□□□ 0.11
SLC6A8-207ENST00000466243 GNPTABQ3T906 1256 aa15.72■□□□□ 0.11
SLC6A8-207ENST00000466243 C9orf50Q5SZB4 431 aa15.72■□□□□ 0.11
SLC6A8-207ENST00000466243 DHX37Q8IY37 1157 aaKnown RBP15.72■□□□□ 0.11
SLC6A8-207ENST00000466243 HIPK3Q9H422 1215 aa15.72■□□□□ 0.11
SLC6A8-207ENST00000466243 MCM3APO60318 1980 aa15.72■□□□□ 0.11
SLC6A8-207ENST00000466243 LCTP09848 1927 aa15.72■□□□□ 0.11
SLC6A8-207ENST00000466243 LAMA3Q16787 3333 aa15.71■□□□□ 0.11
SLC6A8-207ENST00000466243 FRMPD4Q14CM0 1322 aa15.71■□□□□ 0.11
SLC6A8-207ENST00000466243 SORBS3O60504 671 aa15.71■□□□□ 0.11
SLC6A8-207ENST00000466243 STAM2O75886 525 aa15.71■□□□□ 0.11
SLC6A8-207ENST00000466243 CDC27P30260 824 aa15.71■□□□□ 0.11
SLC6A8-207ENST00000466243 EPHB4P54760 987 aa15.71■□□□□ 0.11
SLC6A8-207ENST00000466243 FUT2Q10981 343 aa15.71■□□□□ 0.11
SLC6A8-207ENST00000466243 DGKDQ16760 1214 aa15.71■□□□□ 0.11
SLC6A8-207ENST00000466243 UBE2SQ16763 222 aa15.71■□□□□ 0.11
SLC6A8-207ENST00000466243 WWC2Q6AWC2 1192 aa15.71■□□□□ 0.11
SLC6A8-207ENST00000466243 MFSD5Q6N075 450 aa15.71■□□□□ 0.11
SLC6A8-207ENST00000466243 TMEM199Q8N511 208 aa15.71■□□□□ 0.11
SLC6A8-207ENST00000466243 PPTC7Q8NI37 304 aa15.71■□□□□ 0.11
SLC6A8-207ENST00000466243 PPP1R13LQ8WUF5 828 aa15.71■□□□□ 0.11
SLC6A8-207ENST00000466243 EMID1Q96A84 441 aaPredicted RBP15.71■□□□□ 0.11
SLC6A8-207ENST00000466243 USP26Q9BXU7 913 aa15.71■□□□□ 0.11
SLC6A8-207ENST00000466243 TRMT13Q9NUP7 481 aaKnown RBP15.71■□□□□ 0.11
SLC6A8-207ENST00000466243 RTEL1Q9NZ71 1219 aa15.71■□□□□ 0.11
SLC6A8-207ENST00000466243 V9GY48 417 aaPredicted RBP15.71■□□□□ 0.11
SLC6A8-207ENST00000466243 CCDC196A0A1B0GTZ2 297 aa15.7■□□□□ 0.1
SLC6A8-207ENST00000466243 SPDYE3A6NKU9 549 aa15.7■□□□□ 0.1
SLC6A8-207ENST00000466243 GGPS1O95749 300 aa15.7■□□□□ 0.1
SLC6A8-207ENST00000466243 SUPT20HL2P0C7V6 817 aa15.7■□□□□ 0.1
SLC6A8-207ENST00000466243 TGFB3P10600 412 aa15.7■□□□□ 0.1
SLC6A8-207ENST00000466243 UBA1P22314 1058 aaKnown RBP15.7■□□□□ 0.1
SLC6A8-207ENST00000466243 CYP2C18P33260 490 aa15.7■□□□□ 0.1
SLC6A8-207ENST00000466243 NAPAP54920 295 aa15.7■□□□□ 0.1
SLC6A8-207ENST00000466243 MRPS9P82933 396 aaKnown RBP15.7■□□□□ 0.1
SLC6A8-207ENST00000466243 PPIGQ13427 754 aaKnown RBP eCLIP15.7■□□□□ 0.12e-7■■□□□ 12.8
SLC6A8-207ENST00000466243 CELF3Q5SZQ8 465 aaKnown RBP15.7■□□□□ 0.1
SLC6A8-207ENST00000466243 NFRKBQ6P4R8 1299 aa15.7■□□□□ 0.1
SLC6A8-207ENST00000466243 RNPC3Q96LT9 517 aaKnown RBP15.7■□□□□ 0.1
SLC6A8-207ENST00000466243 SPATA33Q96N06 139 aa15.7■□□□□ 0.1
SLC6A8-207ENST00000466243 MLXIPQ9HAP2 919 aa15.7■□□□□ 0.1
SLC6A8-207ENST00000466243 FAM217BQ9NTX9 383 aaPredicted RBP15.7■□□□□ 0.1
SLC6A8-207ENST00000466243 DNAH12Q6ZR08 3092 aa15.69■□□□□ 0.1
SLC6A8-207ENST00000466243 CSF2RAP15509 400 aa15.69■□□□□ 0.1
SLC6A8-207ENST00000466243 ADD1P35611 737 aaKnown RBP15.69■□□□□ 0.1
SLC6A8-207ENST00000466243 SP2Q02086 613 aa15.69■□□□□ 0.1
SLC6A8-207ENST00000466243 MYSM1Q5VVJ2 828 aa15.69■□□□□ 0.1
SLC6A8-207ENST00000466243 PCNX4Q63HM2 1172 aa15.69■□□□□ 0.1
SLC6A8-207ENST00000466243 PPP1R18Q6NYC8 613 aa15.69■□□□□ 0.1
SLC6A8-207ENST00000466243 XRRA1Q6P2D8 792 aa15.69■□□□□ 0.1
SLC6A8-207ENST00000466243 FBXL16Q8N461 479 aa15.69■□□□□ 0.1
SLC6A8-207ENST00000466243 INPP4AQ96PE3 977 aaPredicted RBP15.69■□□□□ 0.1
SLC6A8-207ENST00000466243 hCG_1984214I3L0E3 225 aa15.68■□□□□ 0.1
SLC6A8-207ENST00000466243 FIBPO43427 364 aa15.68■□□□□ 0.1
SLC6A8-207ENST00000466243 ZNF286BP0CG31 522 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms