RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 GRM1Q13255 1194 aa21.02■□□□□ 0.95
CAPN3-209ENST00000466222 RNF207Q6ZRF8 634 aa21.02■□□□□ 0.95
CAPN3-209ENST00000466222 MOV10L1Q9BXT6 1211 aaKnown RBP21.02■□□□□ 0.95
CAPN3-209ENST00000466222 ANO10Q9NW15 660 aa21.02■□□□□ 0.95
CAPN3-209ENST00000466222 DDX25Q9UHL0 483 aaKnown RBP21.02■□□□□ 0.95
CAPN3-209ENST00000466222 TLL2Q9Y6L7 1015 aa21.02■□□□□ 0.95
CAPN3-209ENST00000466222 RLFQ13129 1914 aa21.01■□□□□ 0.95
CAPN3-209ENST00000466222 PFKFB1P16118 471 aa21.01■□□□□ 0.95
CAPN3-209ENST00000466222 CMA1P23946 247 aa21.01■□□□□ 0.95
CAPN3-209ENST00000466222 PABPC4Q13310 644 aaKnown RBP eCLIP21.01■□□□□ 0.95
CAPN3-209ENST00000466222 IQCB1Q15051 598 aa21.01■□□□□ 0.95
CAPN3-209ENST00000466222 PPP4R3AQ6IN85 833 aa21.01■□□□□ 0.95
CAPN3-209ENST00000466222 DRC7Q8IY82 874 aa21.01■□□□□ 0.95
CAPN3-209ENST00000466222 IL31RAQ8NI17 732 aa21.01■□□□□ 0.95
CAPN3-209ENST00000466222 ZIC5Q96T25 663 aa21.01■□□□□ 0.95
CAPN3-209ENST00000466222 A1CFQ9NQ94 594 aaKnown RBP21.01■□□□□ 0.95
CAPN3-209ENST00000466222 PP2D1A8MPX8 630 aa21■□□□□ 0.95
CAPN3-209ENST00000466222 BMP15O95972 392 aa21■□□□□ 0.95
CAPN3-209ENST00000466222 PTGS1P23219 599 aa21■□□□□ 0.95
CAPN3-209ENST00000466222 USP11P51784 963 aa21■□□□□ 0.95
CAPN3-209ENST00000466222 RBM10P98175 930 aaKnown RBP21■□□□□ 0.95
CAPN3-209ENST00000466222 RESP18Q5W5W9 173 aa21■□□□□ 0.95
CAPN3-209ENST00000466222 NCAPG2Q86XI2 1143 aa21■□□□□ 0.95
CAPN3-209ENST00000466222 MB21D1Q8N884 522 aa21■□□□□ 0.95
CAPN3-209ENST00000466222 MRFAP1L1Q96HT8 127 aa21■□□□□ 0.95
CAPN3-209ENST00000466222 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21■□□□□ 0.95
CAPN3-209ENST00000466222 GHRHRQ02643 423 aa21■□□□□ 0.95
CAPN3-209ENST00000466222 PRR16Q569H4 304 aa21■□□□□ 0.95
CAPN3-209ENST00000466222 RIOX2Q8IUF8 465 aa21■□□□□ 0.95
CAPN3-209ENST00000466222 SMCR8Q8TEV9 937 aaPredicted RBP21■□□□□ 0.95
CAPN3-209ENST00000466222 HAS1Q92839 578 aa21■□□□□ 0.95
CAPN3-209ENST00000466222 MTMR9Q96QG7 549 aa21■□□□□ 0.95
CAPN3-209ENST00000466222 ACAD9Q9H845 621 aa21■□□□□ 0.95
CAPN3-209ENST00000466222 TMEM88BA6NKF7 163 aa20.99■□□□□ 0.95
CAPN3-209ENST00000466222 FAM155AB1AL88 458 aaPredicted RBP20.99■□□□□ 0.95
CAPN3-209ENST00000466222 IGF2BP3O00425 579 aaKnown RBP eCLIP20.99■□□□□ 0.95
CAPN3-209ENST00000466222 OR52Z1P0C646 297 aa20.99■□□□□ 0.95
CAPN3-209ENST00000466222 PRKCSHP14314 528 aaPredicted RBP20.99■□□□□ 0.95
CAPN3-209ENST00000466222 ERCC3P19447 782 aa20.99■□□□□ 0.95
CAPN3-209ENST00000466222 EIF2AK2P19525 551 aaKnown RBP20.99■□□□□ 0.95
CAPN3-209ENST00000466222 TXKP42681 527 aa20.99■□□□□ 0.95
CAPN3-209ENST00000466222 CCDC186Q7Z3E2 898 aa20.99■□□□□ 0.95
CAPN3-209ENST00000466222 ANKRD23Q86SG2 305 aa20.99■□□□□ 0.95
CAPN3-209ENST00000466222 FMR1NBQ8N0W7 255 aaPredicted RBP20.99■□□□□ 0.95
CAPN3-209ENST00000466222 LENG9Q96B70 501 aa20.99■□□□□ 0.95
CAPN3-209ENST00000466222 CYP39A1Q9NYL5 469 aa20.99■□□□□ 0.95
CAPN3-209ENST00000466222 CALCRLQ16602 461 aa20.98■□□□□ 0.95
CAPN3-209ENST00000466222 C17orf53Q8N3J3 647 aaPredicted RBP20.98■□□□□ 0.95
CAPN3-209ENST00000466222 ANKRD13CQ8N6S4 541 aa20.98■□□□□ 0.95
CAPN3-209ENST00000466222 SYMPKQ92797 1274 aaKnown RBP20.98■□□□□ 0.95
CAPN3-209ENST00000466222 FERMT2Q96AC1 680 aa20.98■□□□□ 0.95
CAPN3-209ENST00000466222 NAT10Q9H0A0 1025 aaKnown RBP20.98■□□□□ 0.95
CAPN3-209ENST00000466222 PNMA2Q9UL42 364 aa20.98■□□□□ 0.95
CAPN3-209ENST00000466222 HPSEQ9Y251 543 aa20.98■□□□□ 0.95
CAPN3-209ENST00000466222 PTPRFP10586 1907 aa20.98■□□□□ 0.95
CAPN3-209ENST00000466222 CYP3A7-CYP3A51PA0A087WV96 503 aa20.98■□□□□ 0.95
CAPN3-209ENST00000466222 A0A087X0B3 334 aa20.98■□□□□ 0.95
CAPN3-209ENST00000466222 SLC10A3P09131 477 aa20.98■□□□□ 0.95
CAPN3-209ENST00000466222 CYP3A7P24462 503 aa20.98■□□□□ 0.95
CAPN3-209ENST00000466222 TECP42680 631 aa20.98■□□□□ 0.95
CAPN3-209ENST00000466222 MCTP2Q6DN12 878 aa20.98■□□□□ 0.95
CAPN3-209ENST00000466222 DTHD1Q6ZMT9 781 aa20.98■□□□□ 0.95
CAPN3-209ENST00000466222 PORCNQ9H237 461 aa20.98■□□□□ 0.95
CAPN3-209ENST00000466222 RABGAP1Q9Y3P9 1069 aa20.98■□□□□ 0.95
CAPN3-209ENST00000466222 MORC2Q9Y6X9 1032 aaPredicted RBP20.98■□□□□ 0.95
CAPN3-209ENST00000466222 LOC285556D6RIA3 1793 aa20.97■□□□□ 0.95
CAPN3-209ENST00000466222 CNTN2Q02246 1040 aa20.97■□□□□ 0.95
CAPN3-209ENST00000466222 ARL6IP4Q66PJ3 421 aaKnown RBP20.97■□□□□ 0.95
CAPN3-209ENST00000466222 CEP57L1Q8IYX8 460 aa20.97■□□□□ 0.95
CAPN3-209ENST00000466222 PDILTQ8N807 584 aa20.97■□□□□ 0.95
CAPN3-209ENST00000466222 ZNF579Q8NAF0 562 aaKnown RBP20.97■□□□□ 0.95
CAPN3-209ENST00000466222 RMDN3Q96TC7 470 aa20.97■□□□□ 0.95
CAPN3-209ENST00000466222 PNMA3Q9UL41 463 aa20.97■□□□□ 0.95
CAPN3-209ENST00000466222 CYP3A4P08684 503 aa20.96■□□□□ 0.95
CAPN3-209ENST00000466222 ZNF76P36508 570 aa20.96■□□□□ 0.95
CAPN3-209ENST00000466222 ERVK-9P63128 1117 aa20.96■□□□□ 0.95
CAPN3-209ENST00000466222 ERVK-24P63145 666 aa20.96■□□□□ 0.95
CAPN3-209ENST00000466222 ANKRD35Q8N283 1001 aa20.96■□□□□ 0.95
CAPN3-209ENST00000466222 ERCC4Q92889 916 aaPredicted RBP20.96■□□□□ 0.95
CAPN3-209ENST00000466222 MBOAT7Q96N66 472 aa20.96■□□□□ 0.95
CAPN3-209ENST00000466222 KCNH3Q9ULD8 1083 aa20.96■□□□□ 0.95
CAPN3-209ENST00000466222 IGLV3-22A0A075B6J6 115 aa20.96■□□□□ 0.95
CAPN3-209ENST00000466222 TESPA1A2RU30 521 aaPredicted RBP20.96■□□□□ 0.95
CAPN3-209ENST00000466222 ECM2O94769 699 aaPredicted RBP20.96■□□□□ 0.95
CAPN3-209ENST00000466222 ZNF202O95125 648 aa20.96■□□□□ 0.95
CAPN3-209ENST00000466222 CIITAP33076 1130 aa20.96■□□□□ 0.95
CAPN3-209ENST00000466222 TKFCQ3LXA3 575 aa20.96■□□□□ 0.95
CAPN3-209ENST00000466222 CYP4F22Q6NT55 531 aa20.96■□□□□ 0.95
CAPN3-209ENST00000466222 PAXIP1Q6ZW49 1069 aaPredicted RBP20.96■□□□□ 0.95
CAPN3-209ENST00000466222 CHST13Q8NET6 341 aa20.96■□□□□ 0.95
CAPN3-209ENST00000466222 EFCC1Q9HA90 598 aa20.96■□□□□ 0.95
CAPN3-209ENST00000466222 RPTORQ8N122 1335 aa20.96■□□□□ 0.95
CAPN3-209ENST00000466222 BECN2A8MW95 431 aa20.95■□□□□ 0.94
CAPN3-209ENST00000466222 LAD1O00515 517 aa20.95■□□□□ 0.94
CAPN3-209ENST00000466222 GCFC2P16383 781 aaKnown RBP20.95■□□□□ 0.94
CAPN3-209ENST00000466222 MRPS9P82933 396 aaKnown RBP20.95■□□□□ 0.94
CAPN3-209ENST00000466222 FSTL1Q12841 308 aa20.95■□□□□ 0.94
CAPN3-209ENST00000466222 WDR78Q5VTH9 848 aa20.95■□□□□ 0.94
CAPN3-209ENST00000466222 C11orf57Q6ZUT1 292 aaPredicted RBP20.95■□□□□ 0.94
CAPN3-209ENST00000466222 KCNMB3Q9NPA1 279 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms